# STOCKHOLM 1.0
#=GF ID 4.10.60.10/FF/1273
#=GF DE Gag polyprotein
#=GF AC 4.10.60.10/FF/1273
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 58.696
#=GS A0A1L2A1Q6/238-276  AC A0A1L2A1Q6
#=GS A0A1L2A1Q6/238-276  OS Visna/maedi virus
#=GS A0A1L2A1Q6/238-276  DE Gag polyprotein
#=GS A0A1L2A1Q6/238-276  DR GENE3D; 0422f6570ac63f17f03775656c5b70c9/238-276; 
#=GS A0A1L2A1Q6/238-276  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Visna/maedi virus; 
#=GS A8TCG4/404-434      AC A8TCG4
#=GS A8TCG4/404-434      OS Small ruminant lentivirus
#=GS A8TCG4/404-434      DE Gag protein
#=GS A8TCG4/404-434      DR GENE3D; 35e822df1d2b1395b1e61b935c51359d/404-434; 
#=GS A8TCG4/404-434      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GS B1P2K2/33-61        AC B1P2K2
#=GS B1P2K2/33-61        OS Small ruminant lentivirus
#=GS B1P2K2/33-61        DE Nucleocapsid
#=GS B1P2K2/33-61        DR GENE3D; 895a9519ec0399c80c04196ea8bf10c1/33-61; 
#=GS B1P2K2/33-61        DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GS S5TMM5/137-165      AC S5TMM5
#=GS S5TMM5/137-165      OS Small ruminant lentivirus
#=GS S5TMM5/137-165      DE Gag protein
#=GS S5TMM5/137-165      DR GENE3D; 947ca19007e66bd658a9b7984c17208e/137-165; 
#=GS S5TMM5/137-165      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GS A0A140YI87/131-155  AC A0A140YI87
#=GS A0A140YI87/131-155  OS Small ruminant lentivirus
#=GS A0A140YI87/131-155  DE Gag protein
#=GS A0A140YI87/131-155  DR GENE3D; ae714cd592efb7c882a63c78607c464c/131-155; 
#=GS A0A140YI87/131-155  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GS S5UD72/132-165      AC S5UD72
#=GS S5UD72/132-165      OS Small ruminant lentivirus
#=GS S5UD72/132-165      DE Gag protein
#=GS S5UD72/132-165      DR GENE3D; b6f39052e42bd89ee224de9b1e998ad4/132-165; 
#=GS S5UD72/132-165      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GS S5TMR8/136-169      AC S5TMR8
#=GS S5TMR8/136-169      OS Small ruminant lentivirus
#=GS S5TMR8/136-169      DE Gag protein
#=GS S5TMR8/136-169      DR GENE3D; e4656b2536b57acc911080223cd18be5/136-169; 
#=GS S5TMR8/136-169      DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GF TC 55.1 9.7E-19
#=GF SQ 7
A0A1L2A1Q6/238-276          -----IICHHCGKRGHMQKDCRQKKRNEIKQQGNSRRGPRVLPS
A8TCG4/404-434              ----GIICHYCGKRGHLQKDCRQKKNNSTKQQGNG---------
B1P2K2/33-61                -----IICHHCGKRGHMQKDCRQKKIGDTKQQGN----------
S5TMM5/137-165              -----IICHHCGKRGHMQKDCRKKKVRTSSSRET----------
A0A140YI87/131-155          ----SIICHHCGKRGHMQKDCRQKKRQEM---------------
S5UD72/132-165              QRRQGIICHHCKKRGHMQKDCRQKKKNDTEQQEN----------
S5TMR8/136-169              ----GIICHHCGKRGHMQKDCRQKKRNDIKQQGNSRET------
#=GC scorecons              00001999989799997999997993444344440000000000
#=GC scorecons_70           _____********************___________________
#=GC scorecons_80           _____******_*************___________________
#=GC scorecons_90           _____****_*_****_*****_**___________________
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