# STOCKHOLM 1.0 #=GF ID 4.10.60.10/FF/10809 #=GF DE Retrovirus-related Pol polyprotein from transposon TNT 1-94 #=GF AC 4.10.60.10/FF/10809 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 81.283 #=GS P10978/208-260 AC P10978 #=GS P10978/208-260 OS Nicotiana tabacum #=GS P10978/208-260 DE Retrovirus-related Pol polyprotein from transposon TNT 1-94 #=GS P10978/208-260 DR GENE3D; dedf8be93c673ab38c9ac7e701cd70dc/208-260; #=GS P10978/208-260 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana; Nicotiana tabacum; #=GS P10978/208-260 DR EC; 2.7.7.49; #=GS K4B5Y2/24-76 AC K4B5Y2 #=GS K4B5Y2/24-76 OS Solanum lycopersicum #=GS K4B5Y2/24-76 DE Uncharacterized protein #=GS K4B5Y2/24-76 DR GENE3D; 1a6811ddb176e3bddb74b444a864e3e3/24-76; #=GS K4B5Y2/24-76 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; #=GS K4BFY9/98-145 AC K4BFY9 #=GS K4BFY9/98-145 OS Solanum lycopersicum #=GS K4BFY9/98-145 DE Uncharacterized protein #=GS K4BFY9/98-145 DR GENE3D; 4669db1837d07846f11fa78eacbf2601/98-145; #=GS K4BFY9/98-145 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; #=GS K4CS12/23-77 AC K4CS12 #=GS K4CS12/23-77 OS Solanum lycopersicum #=GS K4CS12/23-77 DE Uncharacterized protein #=GS K4CS12/23-77 DR GENE3D; 67d2c4869631146d6f2fab17fa380e31/23-77; #=GS K4CS12/23-77 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; #=GS K4D176/209-260 AC K4D176 #=GS K4D176/209-260 OS Solanum lycopersicum #=GS K4D176/209-260 DE Uncharacterized protein #=GS K4D176/209-260 DR GENE3D; 855886c0e917c82359d55950d8aa9a02/209-260; #=GS K4D176/209-260 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; #=GS K4C6I5/182-234 AC K4C6I5 #=GS K4C6I5/182-234 OS Solanum lycopersicum #=GS K4C6I5/182-234 DE Uncharacterized protein #=GS K4C6I5/182-234 DR GENE3D; ccbd942289eaf86afa2ebef585e54cd2/182-234; #=GS K4C6I5/182-234 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; #=GS K4D0A3/183-238 AC K4D0A3 #=GS K4D0A3/183-238 OS Solanum lycopersicum #=GS K4D0A3/183-238 DE Uncharacterized protein #=GS K4D0A3/183-238 DR GENE3D; ebafaebb3041e47f1cf091b0f50bb4e2/183-238; #=GS K4D0A3/183-238 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; #=GS Q9AU17/208-261 AC Q9AU17 #=GS Q9AU17/208-261 OS Solanum chilense #=GS Q9AU17/208-261 DE Polyprotein-like #=GS Q9AU17/208-261 DR GENE3D; 633eef3c203f819e16654cb56d80fc51/208-261; #=GS Q9AU17/208-261 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum chilense; #=GS G0V596/65-92 AC G0V596 #=GS G0V596/65-92 OS Naumovozyma castellii CBS 4309 #=GS G0V596/65-92 DE Uncharacterized protein #=GS G0V596/65-92 DR GENE3D; 4399c311bd9e1cc549ea93f116757818/65-92; #=GS G0V596/65-92 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Naumovozyma; Naumovozyma castellii; #=GS W0VK18/65-89 AC W0VK18 #=GS W0VK18/65-89 OS Zygosaccharomyces bailii ISA1307 #=GS W0VK18/65-89 DE Probable Zinc finger protein GIS2 #=GS W0VK18/65-89 DR GENE3D; 77557b0a0ec1b5499c2ddcf69183aa9a/65-89; #=GS W0VK18/65-89 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces bailii; #=GS C5DK99/67-93 AC C5DK99 #=GS C5DK99/67-93 OS Lachancea thermotolerans CBS 6340 #=GS C5DK99/67-93 DE KLTH0F02904p #=GS C5DK99/67-93 DR GENE3D; 8eefb36fa006a0492db57cea90feb4de/67-93; #=GS C5DK99/67-93 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lachancea; Lachancea thermotolerans; #=GS J8Q094/65-86 AC J8Q094 #=GS J8Q094/65-86 OS Saccharomyces arboricola H-6 #=GS J8Q094/65-86 DE Gis2p #=GS J8Q094/65-86 DR GENE3D; 2d2fe7f33a601976696a01f28dd925b6/65-86; #=GS J8Q094/65-86 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; #=GS J6EL45/65-86 AC J6EL45 #=GS J6EL45/65-86 OS Saccharomyces kudriavzevii IFO 1802 #=GS J6EL45/65-86 DE GIS2-like protein #=GS J6EL45/65-86 DR GENE3D; 85a75e6dbb7ad20127888de7a3a73c6a/65-86; #=GS J6EL45/65-86 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; #=GS S6EM69/65-89 AC S6EM69 #=GS S6EM69/65-89 OS Zygosaccharomyces bailii CLIB 213 #=GS S6EM69/65-89 DE ZYBA0S14-00430g1_1 #=GS S6EM69/65-89 DR GENE3D; 9befe1fca599b3c43cc20be723f0302c/65-89; #=GS S6EM69/65-89 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces bailii; #=GS W0VTS1/65-89 AC W0VTS1 #=GS W0VTS1/65-89 OS Zygosaccharomyces bailii ISA1307 #=GS W0VTS1/65-89 DE Probable Zinc finger protein GIS2 #=GS W0VTS1/65-89 DR GENE3D; 9befe1fca599b3c43cc20be723f0302c/65-89; #=GS W0VTS1/65-89 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces bailii; #=GS C5DYV9/65-89 AC C5DYV9 #=GS C5DYV9/65-89 OS Zygosaccharomyces rouxii CBS 732 #=GS C5DYV9/65-89 DE ZYRO0F16148p #=GS C5DYV9/65-89 DR GENE3D; 006ace26797eceb8f50c3eef739817ec/65-89; #=GS C5DYV9/65-89 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces rouxii; #=GS B2G492/65-89 AC B2G492 #=GS B2G492/65-89 OS Zygosaccharomyces rouxii #=GS B2G492/65-89 DE Zinc finger protein GIS2 #=GS B2G492/65-89 DR GENE3D; 006ace26797eceb8f50c3eef739817ec/65-89; #=GS B2G492/65-89 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces; Zygosaccharomyces rouxii; #=GS H0H039/65-86 AC H0H039 #=GS H0H039/65-86 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0H039/65-86 DE Gis2p #=GS H0H039/65-86 DR GENE3D; 9bc31a65f819a5899f90dbaebfdc937e/65-86; #=GS H0H039/65-86 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS J7S724/65-90 AC J7S724 #=GS J7S724/65-90 OS Kazachstania naganishii CBS 8797 #=GS J7S724/65-90 DE Uncharacterized protein #=GS J7S724/65-90 DR GENE3D; a9d1d69975066e09d0a40f7afe6c6400/65-90; #=GS J7S724/65-90 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kazachstania; Kazachstania naganishii; #=GF TC 49.6 3.1E-16 #=GF SQ 19 P10978/208-260 --SSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKN- K4B5Y2/24-76 --ISSNYGRSRARGKSKVRSKSKARNCYNCDQPGHFKRDCPNVKRGKGESNGQKN- K4BFY9/98-145 ---SSNYGRSGARGKSKVRSKLKARNCYNCNQPGHFKRDCPNLKRGKGDSG----- K4CS12/23-77 -GSSSNYGRFGARGKSKVRSKSKARNCYNCDQPGHFKRDCPNLKRVKKESSGQKND K4D176/209-260 ---SSNYGRSEARGKSKVRSKSKARNCYNCDQPGHFKRDCPNLKRGKGESSDQKN- K4C6I5/182-234 --NEKMRKRSGARGKSKVRSKLKARNCYNCDQPGHFKRDCPNLKRGKGESSGQKN- K4D0A3/183-238 QRSSSNYGRSGARGKSKVRSKSKARNCYNCDQPGHFERDCPNLKRGKGESSGQKND Q9AU17/208-261 -RSSSNYGRSGARGKSKVRSKSKARNCYNCDQPGHFKRDCPNPKRGKGESSGQKN- G0V596/65-92 ------------------------QRCYNCNQTGHISKDCPEPRKPREPRN---N- W0VK18/65-89 ------------------------QRCYNCNQTGHISRECPEPRKSRFG------- C5DK99/67-93 ------------------------QRCYNCNQTGHISRDCADPKKPRFAGG----- J8Q094/65-86 ------------------------QRCFNCNQTGHISRECPEPKKA---------- J6EL45/65-86 ------------------------QRCFNCNQTGHISKECPEPKKA---------- S6EM69/65-89 ------------------------QRCYNCNQTGHISRECPEPRKSRFG------- W0VTS1/65-89 ------------------------QRCYNCNQTGHISRECPEPRKSRFG------- C5DYV9/65-89 ------------------------QRCYNCNQTGHISRECPEPKKSRFA------- B2G492/65-89 ------------------------QRCYNCNQTGHISRECPEPKKSRFA------- H0H039/65-86 ------------------------QRCFNCNQTGHISRECPEPKKA---------- J7S724/65-90 ------------------------QRCFNCNQTGHISKDCTEPRKPRAQA------ #=GC scorecons 00011111111111111111111165979969699558797657745232111110 #=GC scorecons_70 ________________________*_******_**__****__**___________ #=GC scorecons_80 __________________________****_*_**__****__*____________ #=GC scorecons_90 __________________________*_**_*_**____*________________ //