# STOCKHOLM 1.0
#=GF ID 4.10.60.10/FF/10692
#=GF DE GAG polyprotein
#=GF AC 4.10.60.10/FF/10692
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 63.770
#=GS Q82851/361-406  AC Q82851
#=GS Q82851/361-406  OS Jembrana disease virus
#=GS Q82851/361-406  DE Gag-Pol polyprotein
#=GS Q82851/361-406  DR GENE3D; a23516151fb2ac760583189484a6b88b/361-406; 
#=GS Q82851/361-406  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS Q82851/361-406  DR EC; 2.7.7.49; 2.7.7.7; 3.1.13.2; 3.1.26.13; 
#=GS P19560/387-443  AC P19560
#=GS P19560/387-443  OS Bovine immunodeficiency virus R29
#=GS P19560/387-443  DE Gag-Pol polyprotein
#=GS P19560/387-443  DR GENE3D; fe9ac721045e55fe714215e1692bcebb/387-443; 
#=GS P19560/387-443  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS P19560/387-443  DR EC; 2.7.7.49; 2.7.7.7; 3.1.13.2; 3.1.26.13; 
#=GS P19558/393-441  AC P19558
#=GS P19558/393-441  OS Bovine immunodeficiency virus R29
#=GS P19558/393-441  DE Gag polyprotein
#=GS P19558/393-441  DR GENE3D; 72a1bfd2dd641d29fc8f84772e9f665e/393-441; 
#=GS P19558/393-441  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS Q82850/361-406  AC Q82850
#=GS Q82850/361-406  OS Jembrana disease virus
#=GS Q82850/361-406  DE Gag polyprotein
#=GS Q82850/361-406  DR GENE3D; 76e73157192d9e22db6bf881d1d4481e/361-406; 
#=GS Q82850/361-406  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Bovine immunodeficiency virus; 
#=GS P16087/370-413  AC P16087
#=GS P16087/370-413  OS Feline immunodeficiency virus (isolate Petaluma)
#=GS P16087/370-413  DE Gag polyprotein
#=GS P16087/370-413  DR GENE3D; a9e797a54392a4f694ca0878daf13dbf/370-413; 
#=GS P16087/370-413  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Feline immunodeficiency virus; 
#=GF TC 78.2 9.5E-26
#=GF SQ 5
Q82851/361-406          ---------VKGDGEVQRCYGCGKPGHIRRDCKN-QKCFKCGKPGHLQRNCKSKNR--
P19560/387-443          HTPEAYASQTSGPEDGRRCYGCGKTGHLKRNCKQ-QKCYHCGKPGHQARNCRSKNREV
P19558/393-441          ------ASQTSGPEDGRRCYGCGKTGHLKRNCKQ-QKCYHCGKPGHQARNCRSKNG--
Q82850/361-406          ---------VKGDGEVQRCYGCGKPGHIRRDCKN-QKCFKCGKPGHLQRNCKSKNG--
P16087/370-413          ---------SKGSGPV--CFNCKKPGHLARQCREVKKCNKCGKPGHLAAKCWQGN---
#=GC scorecons          0000000004493544249769595996494974069945999999455694559200
#=GC scorecons_70       ___________*______**_*_*_***_*_**__***__******___**___*___
#=GC scorecons_80       ___________*______**_*_*_**__*_**___**__******____*___*___
#=GC scorecons_90       ___________*______*__*_*_**__*_*____**__******____*___*___
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