# STOCKHOLM 1.0 #=GF ID 4.10.60.10/FF/10688 #=GF DE Gag polyprotein pr65 #=GF AC 4.10.60.10/FF/10688 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 90.861 #=GS 1a6bB00/1-40 AC P03332 #=GS 1a6bB00/1-40 OS Moloney murine leukemia virus isolate Shinnick #=GS 1a6bB00/1-40 DE Gag polyprotein #=GS 1a6bB00/1-40 DR CATH; 1a6b; B:14-53; #=GS 1a6bB00/1-40 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1a6bB00/1-40 DR GO; GO:0005515; #=GS 1u6pA00/1-56 AC P03332 #=GS 1u6pA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1u6pA00/1-56 DE Gag polyprotein #=GS 1u6pA00/1-56 DR CATH; 1u6p; A:1-56; #=GS 1u6pA00/1-56 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1u6pA00/1-56 DR GO; GO:0005515; #=GS P03355/479-534 AC P03355 #=GS P03355/479-534 OS Moloney murine leukemia virus isolate Shinnick #=GS P03355/479-534 DE Gag-Pol polyprotein #=GS P03355/479-534 DR GENE3D; cdd2d55e61fe9a7826e4886b5b37a9e0/479-534; #=GS P03355/479-534 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03355/479-534 DR GO; GO:0003677; GO:0006308; GO:0032993; GO:0044824; GO:0044826; #=GS P03355/479-534 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q6YIY0/477-532 AC Q6YIY0 #=GS Q6YIY0/477-532 OS Mus musculus #=GS Q6YIY0/477-532 DE Gag protein #=GS Q6YIY0/477-532 DR GENE3D; 2287366883af09e4a9ba901077a68b1a/477-532; #=GS Q6YIY0/477-532 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS A0A068EWW2/478-533 AC A0A068EWW2 #=GS A0A068EWW2/478-533 OS Mus musculus #=GS A0A068EWW2/478-533 DE Gag polyprotein #=GS A0A068EWW2/478-533 DR GENE3D; 308a9f7e7745282720f5e900227a1936/478-533; #=GS A0A068EWW2/478-533 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS A1Z651/477-532 AC A1Z651 #=GS A1Z651/477-532 OS Xenotropic MuLV-related virus VP62 #=GS A1Z651/477-532 DE Gag-Pol polyprotein #=GS A1Z651/477-532 DR GENE3D; 45c08060ec0e7043ac74a9b9dee643e2/477-532; #=GS A1Z651/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS A1Z651/477-532 DR GO; GO:0042802; #=GS A1Z651/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q2F7J0/477-532 AC Q2F7J0 #=GS Q2F7J0/477-532 OS Xenotropic MuLV-related virus VP42 #=GS Q2F7J0/477-532 DE Gag-Pol polyprotein #=GS Q2F7J0/477-532 DR GENE3D; 3ed901e5ee8f2e8a4455046b8e2c785c/477-532; #=GS Q2F7J0/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J0/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS D0UFA3/477-532 AC D0UFA3 #=GS D0UFA3/477-532 OS XMRV #=GS D0UFA3/477-532 DE Putative gag-pro-pol polyprotein #=GS D0UFA3/477-532 DR GENE3D; 45c08060ec0e7043ac74a9b9dee643e2/477-532; #=GS D0UFA3/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS D0UFA3/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS Q2F7J3/477-532 AC Q2F7J3 #=GS Q2F7J3/477-532 OS Xenotropic MuLV-related virus VP35 #=GS Q2F7J3/477-532 DE Gag-Pol polyprotein #=GS Q2F7J3/477-532 DR GENE3D; 5e067199ac8630b8038fa788b87c3c24/477-532; #=GS Q2F7J3/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q2F7J3/477-532 DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; #=GS A0A068XZY4/32-75 AC A0A068XZY4 #=GS A0A068XZY4/32-75 OS Echinococcus multilocularis #=GS A0A068XZY4/32-75 DE Gag pro pol polyprotein #=GS A0A068XZY4/32-75 DR GENE3D; 16fb6ef54f8af2748d589a820914f5e2/32-75; #=GS A0A068XZY4/32-75 DR ORG; Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus; Echinococcus multilocularis; #=GS A0A0P6CEX0/269-324 AC A0A0P6CEX0 #=GS A0A0P6CEX0/269-324 OS Daphnia magna #=GS A0A0P6CEX0/269-324 DE Putative PLAC4 protein #=GS A0A0P6CEX0/269-324 DR GENE3D; 170d6629fec727a52aababf7586e03d6/269-324; #=GS A0A0P6CEX0/269-324 DR ORG; Eukaryota; Metazoa; Arthropoda; Crustacea; Branchiopoda; Phyllopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia; Daphnia magna; #=GS M3WYN2/440-486 AC M3WYN2 #=GS M3WYN2/440-486 OS Felis catus #=GS M3WYN2/440-486 DE Uncharacterized protein #=GS M3WYN2/440-486 DR GENE3D; 30699c92114dba365fc22f433ebe54f0/440-486; #=GS M3WYN2/440-486 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; #=GS I7GU47/499-551 AC I7GU47 #=GS I7GU47/499-551 OS Felis catus #=GS I7GU47/499-551 DE Gag-Pol polyprotein #=GS I7GU47/499-551 DR GENE3D; 414664359e96db93e8158060e93c0c3d/499-551; #=GS I7GU47/499-551 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; #=GS G3GSE2/478-531 AC G3GSE2 #=GS G3GSE2/478-531 OS Cricetulus griseus #=GS G3GSE2/478-531 DE Gag polyprotein #=GS G3GSE2/478-531 DR GENE3D; 472de3334e07acce3f5434f92f931b16/478-531; #=GS G3GSE2/478-531 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; #=GS M3WYE3/440-489 AC M3WYE3 #=GS M3WYE3/440-489 OS Felis catus #=GS M3WYE3/440-489 DE Uncharacterized protein #=GS M3WYE3/440-489 DR GENE3D; 67593a45c92b6249251b8e2431010e64/440-489; #=GS M3WYE3/440-489 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; #=GS F8S319/454-515 AC F8S319 #=GS F8S319/454-515 OS Sus scrofa #=GS F8S319/454-515 DE Gag protein #=GS F8S319/454-515 DR GENE3D; 8630b02b59b93a97b5eba8201791da86/454-515; #=GS F8S319/454-515 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; #=GS D0E0H1/463-521 AC D0E0H1 #=GS D0E0H1/463-521 OS Orcinus orca #=GS D0E0H1/463-521 DE Gag protein #=GS D0E0H1/463-521 DR GENE3D; 8c602bbeab53a93da8a7fe957efaecbd/463-521; #=GS D0E0H1/463-521 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Cetacea; Odontoceti; Delphinidae; Orcinus; Orcinus orca; #=GS I3L9T4/454-515 AC I3L9T4 #=GS I3L9T4/454-515 OS Sus scrofa #=GS I3L9T4/454-515 DE Uncharacterized protein #=GS I3L9T4/454-515 DR GENE3D; a5163c2032b68b75db49fe010f3f2096/454-515; #=GS I3L9T4/454-515 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; #=GS B3VQ65/454-515 AC B3VQ65 #=GS B3VQ65/454-515 OS Sus scrofa #=GS B3VQ65/454-515 DE Putative gag-pol polyprotein #=GS B3VQ65/454-515 DR GENE3D; cfa732f51fb1b06609e0652083798942/454-515; #=GS B3VQ65/454-515 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; #=GS S4X6K5/534-594 AC S4X6K5 #=GS S4X6K5/534-594 OS Mus caroli #=GS S4X6K5/534-594 DE Gag protein #=GS S4X6K5/534-594 DR GENE3D; d9187d369be8b277af3421fb887abe1a/534-594; #=GS S4X6K5/534-594 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus caroli; #=GS M3XFF7/447-500 AC M3XFF7 #=GS M3XFF7/447-500 OS Felis catus #=GS M3XFF7/447-500 DE Uncharacterized protein #=GS M3XFF7/447-500 DR GENE3D; ef1f0adcfa11fbe732e2649938870755/447-500; #=GS M3XFF7/447-500 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; #=GS G3IAD2/102-157 AC G3IAD2 #=GS G3IAD2/102-157 OS Cricetulus griseus #=GS G3IAD2/102-157 DE Gag polyprotein #=GS G3IAD2/102-157 DR GENE3D; f0ff192fcd04e303a3a6e232a7110fbb/102-157; #=GS G3IAD2/102-157 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; #=GS M3X0L9/455-507 AC M3X0L9 #=GS M3X0L9/455-507 OS Felis catus #=GS M3X0L9/455-507 DE Uncharacterized protein #=GS M3X0L9/455-507 DR GENE3D; f9626abdec7fac3138e9bee72ec9d420/455-507; #=GS M3X0L9/455-507 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; #=GS 1wwdA00/1-56 AC P03332 #=GS 1wwdA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wwdA00/1-56 DE Gag polyprotein #=GS 1wwdA00/1-56 DR CATH; 1wwd; A:1-56; #=GS 1wwdA00/1-56 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wwdA00/1-56 DR GO; GO:0005515; #=GS 1wweA00/1-56 AC P03332 #=GS 1wweA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wweA00/1-56 DE Gag polyprotein #=GS 1wweA00/1-56 DR CATH; 1wwe; A:1-56; #=GS 1wweA00/1-56 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wweA00/1-56 DR GO; GO:0005515; #=GS 1wwfA00/1-56 AC P03332 #=GS 1wwfA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wwfA00/1-56 DE Gag polyprotein #=GS 1wwfA00/1-56 DR CATH; 1wwf; A:1-56; #=GS 1wwfA00/1-56 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wwfA00/1-56 DR GO; GO:0005515; #=GS 1wwgA00/1-56 AC P03332 #=GS 1wwgA00/1-56 OS Moloney murine leukemia virus isolate Shinnick #=GS 1wwgA00/1-56 DE Gag polyprotein #=GS 1wwgA00/1-56 DR CATH; 1wwg; A:1-56; #=GS 1wwgA00/1-56 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS 1wwgA00/1-56 DR GO; GO:0005515; #=GS P03332/479-534 AC P03332 #=GS P03332/479-534 OS Moloney murine leukemia virus isolate Shinnick #=GS P03332/479-534 DE Gag polyprotein #=GS P03332/479-534 DR GENE3D; 43853fb568c46c30b7101de41edcfda0/479-534; #=GS P03332/479-534 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03332/479-534 DR GO; GO:0005515; #=GS Q8UN00/479-534 AC Q8UN00 #=GS Q8UN00/479-534 OS Moloney murine leukemia virus #=GS Q8UN00/479-534 DE Pr180 Gag-Pro-Pol polyprotein #=GS Q8UN00/479-534 DR GENE3D; d057d87c37ff6bcbbcb11fc5f104ada6/479-534; #=GS Q8UN00/479-534 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q8UN00/479-534 DR GO; GO:0005515; #=GS Q7ZKZ8/1-33 AC Q7ZKZ8 #=GS Q7ZKZ8/1-33 OS Recombinant M-MuLV/RaLV retrovirus #=GS Q7ZKZ8/1-33 DE Gag protein #=GS Q7ZKZ8/1-33 DR GENE3D; 051686da62dbf3c7fd73364d1d074aa1/1-33; #=GS Q7ZKZ8/1-33 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Recombinant M-MuLV/RaLV retrovirus; #=GS P29168/477-532 AC P29168 #=GS P29168/477-532 OS Murine leukemia virus (strain DEF27) #=GS P29168/477-532 DE Gag polyprotein #=GS P29168/477-532 DR GENE3D; 0f9c73e4f73094efa0224eb12cafd8c0/477-532; #=GS P29168/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P11269/478-533 AC P11269 #=GS P11269/478-533 OS Radiation murine leukemia virus #=GS P11269/478-533 DE Gag polyprotein #=GS P11269/478-533 DR GENE3D; 1b6179abb0702e8fd11ca0d25e689207/478-533; #=GS P11269/478-533 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A0A068EUF8/478-533 AC A0A068EUF8 #=GS A0A068EUF8/478-533 OS Polytropic murine leukemia virus #=GS A0A068EUF8/478-533 DE Gag polyprotein #=GS A0A068EUF8/478-533 DR GENE3D; 308a9f7e7745282720f5e900227a1936/478-533; #=GS A0A068EUF8/478-533 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P03336/478-533 AC P03336 #=GS P03336/478-533 OS AKR (endogenous) murine leukemia virus #=GS P03336/478-533 DE Gag polyprotein #=GS P03336/478-533 DR GENE3D; 308a9f7e7745282720f5e900227a1936/478-533; #=GS P03336/478-533 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P21416/463-515 AC P21416 #=GS P21416/463-515 OS Gibbon ape leukemia virus #=GS P21416/463-515 DE Gag polyprotein #=GS P21416/463-515 DR GENE3D; 4a7828e09e0b08997c376040925cc546/463-515; #=GS P21416/463-515 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Gibbon ape leukemia virus; #=GS Q83371/169-224 AC Q83371 #=GS Q83371/169-224 OS Moloney murine leukemia virus #=GS Q83371/169-224 DE Reverse transcriptase #=GS Q83371/169-224 DR GENE3D; 57f8e93404549c7944fb711b0c79bb77/169-224; #=GS Q83371/169-224 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS O89811/520-576 AC O89811 #=GS O89811/520-576 OS Feline leukemia virus #=GS O89811/520-576 DE Gag-pol polyprotein gPr80 #=GS O89811/520-576 DR GENE3D; 5a97ed43a4f916de14c3a4608a95377e/520-576; #=GS O89811/520-576 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Feline leukemia virus; #=GS A7LKA6/491-543 AC A7LKA6 #=GS A7LKA6/491-543 OS RD114 retrovirus #=GS A7LKA6/491-543 DE Gag-pol polyprotein #=GS A7LKA6/491-543 DR GENE3D; 5a9f682ac27f9043a4b822f819cdf86e/491-543; #=GS A7LKA6/491-543 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; RD114 retrovirus; #=GS P21435/481-536 AC P21435 #=GS P21435/481-536 OS HoMuLV murine leukemia virus #=GS P21435/481-536 DE Gag polyprotein #=GS P21435/481-536 DR GENE3D; 5d3bf93cd1629f9995cdb6ac9f0d1282/481-536; #=GS P21435/481-536 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q9E7M1/477-532 AC Q9E7M1 #=GS Q9E7M1/477-532 OS DG-75 Murine leukemia virus #=GS Q9E7M1/477-532 DE Putative gag-pro-pol polyprotein #=GS Q9E7M1/477-532 DR GENE3D; 7108f26182c8fe028e15a22e1081edb7/477-532; #=GS Q9E7M1/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q5PYI3/474-529 AC Q5PYI3 #=GS Q5PYI3/474-529 OS Murine leukemia virus #=GS Q5PYI3/474-529 DE Gag-pol polyprotein #=GS Q5PYI3/474-529 DR GENE3D; 715a2783b44231264c3adea331e1e82f/474-529; #=GS Q5PYI3/474-529 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS O70651/457-516 AC O70651 #=GS O70651/457-516 OS Gibbon ape leukemia virus #=GS O70651/457-516 DE Gag polyprotein #=GS O70651/457-516 DR GENE3D; 79158078c798865a6eb7eed711b8d384/457-516; #=GS O70651/457-516 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Gibbon ape leukemia virus; #=GS I6R7B0/478-537 AC I6R7B0 #=GS I6R7B0/478-537 OS Rousettus leschenaultii retrovirus #=GS I6R7B0/478-537 DE Gag #=GS I6R7B0/478-537 DR GENE3D; 7e8a6d772b34195b104a71bc13be6e6f/478-537; #=GS I6R7B0/478-537 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Bat gammaretrovirus; #=GS Q27ID9/477-532 AC Q27ID9 #=GS Q27ID9/477-532 OS Xenotropic MuLV-related virus VP62 #=GS Q27ID9/477-532 DE Gag polyprotein #=GS Q27ID9/477-532 DR GENE3D; 7ea32d1fb19a7d3a234aa242494d0918/477-532; #=GS Q27ID9/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS D0UFA4/477-532 AC D0UFA4 #=GS D0UFA4/477-532 OS XMRV #=GS D0UFA4/477-532 DE Gag protein #=GS D0UFA4/477-532 DR GENE3D; 7ea32d1fb19a7d3a234aa242494d0918/477-532; #=GS D0UFA4/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia-related retroviruses; #=GS Q6UJZ3/454-515 AC Q6UJZ3 #=GS Q6UJZ3/454-515 OS Porcine endogenous retrovirus #=GS Q6UJZ3/454-515 DE Gag protein #=GS Q6UJZ3/454-515 DR GENE3D; 8630b02b59b93a97b5eba8201791da86/454-515; #=GS Q6UJZ3/454-515 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Porcine type-C oncovirus; #=GS A0A126QCH6/481-536 AC A0A126QCH6 #=GS A0A126QCH6/481-536 OS Murine leukemia virus #=GS A0A126QCH6/481-536 DE Putative gag-pro-pol polyprotein #=GS A0A126QCH6/481-536 DR GENE3D; 8c14a04631f79e774df168373a4484dd/481-536; #=GS A0A126QCH6/481-536 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q83378/460-512 AC Q83378 #=GS Q83378/460-512 OS Rat leukemia virus #=GS Q83378/460-512 DE Gag protein #=GS Q83378/460-512 DR GENE3D; 9348c458d76869df180deb1c5e462cf7/460-512; #=GS Q83378/460-512 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Rat leukemia virus; #=GS P27460/477-532 AC P27460 #=GS P27460/477-532 OS Cas-Br-E murine leukemia virus #=GS P27460/477-532 DE Gag polyprotein #=GS P27460/477-532 DR GENE3D; 9864271b963de2f2639f62b328cb09cd/477-532; #=GS P27460/477-532 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS Q85559/53-89 AC Q85559 #=GS Q85559/53-89 OS Baboon endogenous virus strain M7 #=GS Q85559/53-89 DE Gag protein #=GS Q85559/53-89 DR GENE3D; a1ff514c01b41594878da8015f594d6a/53-89; #=GS Q85559/53-89 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Baboon endogenous virus; #=GS P10262/520-576 AC P10262 #=GS P10262/520-576 OS Feline leukemia virus #=GS P10262/520-576 DE Gag polyprotein #=GS P10262/520-576 DR GENE3D; aa399fbeefc114303d2ebbf9e7352109/520-576; #=GS P10262/520-576 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Feline leukemia virus; #=GS Q9TTC2/456-516 AC Q9TTC2 #=GS Q9TTC2/456-516 OS Koala retrovirus #=GS Q9TTC2/456-516 DE Gag polyprotein #=GS Q9TTC2/456-516 DR GENE3D; c253608cf8197510106c2d4914f1e1c1/456-516; #=GS Q9TTC2/456-516 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Koala retrovirus; #=GS P26807/480-535 AC P26807 #=GS P26807/480-535 OS Friend murine leukemia virus (ISOLATE 57) #=GS P26807/480-535 DE Gag polyprotein #=GS P26807/480-535 DR GENE3D; d5f33234cf3eaccdd370765541f33d5c/480-535; #=GS P26807/480-535 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS A0A1D8DE58/477-521 AC A0A1D8DE58 #=GS A0A1D8DE58/477-521 OS Murine leukemia virus #=GS A0A1D8DE58/477-521 DE Truncated gag-pol #=GS A0A1D8DE58/477-521 DR GENE3D; d7a7655ccf13e4880d9d8d151d716b0e/477-521; #=GS A0A1D8DE58/477-521 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GS P29167/478-533 AC P29167 #=GS P29167/478-533 OS Murine leukemia virus (strain BM5 ECO) #=GS P29167/478-533 DE Gag polyprotein #=GS P29167/478-533 DR GENE3D; eab1ed8ad8719c0e0775d4775799dd96/478-533; #=GS P29167/478-533 DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus; Murine leukemia virus; #=GF TC 62.4 5.1E-20 #=GF SQ 55 1a6bB00/1-40 -----------------------------GER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQT--- 1u6pA00/1-56 ATVVSGQ----------------KQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P03355/479-534 ATVVSGQ----------------KQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q6YIY0/477-532 ATVVSGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A068EWW2/478-533 ATVVSGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A1Z651/477-532 ATVVIGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q2F7J0/477-532 ATVVIGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL D0UFA3/477-532 ATVVIGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q2F7J3/477-532 ATVVIGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A068XZY4/32-75 IKTLQTPG---------------------------------GPLSKDQCAYCKEKGHWIKDCPKRTKKPEKPNAQA--L A0A0P6CEX0/269-324 ATVVIGQ----------------RQDRQGGER-------RRPQLNKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL M3WYN2/440-486 ----------------------EKMTKVLAAV-------VQKPLDKDQCAYCKEKGHWARECPKKKRPRHNQKPWQ--- I7GU47/499-551 AAVVTEN----------------GTGKSGETK-------RRPKVGKDQCAYCKERGHWIKDCPKRPGNSKKPASVL--- G3GSE2/478-531 ATVVQGSK------------HRPGQTGNLGDK-------RRTRVERNQCAYCKEKGHWVKHCPKNPRRKPTPI------ M3WYE3/440-489 -QLADDS----------------RGGKGTTKG-------GKQRLQKDQCAYCKEIGHWARDCPKRPAGSRGSDP----- F8S319/454-515 AAVVEGKSNRERERDFRKIRSGPRQSGNLGN---------RTPLDKDQCAYCKEKGHWARDCPKKGNKGLK-------- D0E0H1/463-521 ATVVGGRN----------IGDRNRQEGRTADR--------RRPLDKDQCAYCKEKGHWARECPKKKNGGRPTRNKI--L I3L9T4/454-515 AAVVEGKSNRERERDFRKIRSGPRQSGNLGN---------RTPLDKDQCAYCKEKGHWARDCPKKGNKGLK-------- B3VQ65/454-515 AAVVEGKSNRERERDFRKIRSGPRQSGNLGN---------RTPLDKDQCAYCKEKGHWARDCPKKGNKGLK-------- S4X6K5/534-594 AAVVGERK------------SEKGQSGYLGNRARRPPGERRLPLEKDQCAYCKEKGHWARDCPKKKPRGPKVL------ M3XFF7/447-500 ATVVAQNR------------DKDREEGRQGDR-------RKIPLGKDQCAYCKEKGHWVRDCPKRPRKKPAEI------ G3IAD2/102-157 ATVVTGQ----------------RQNRQRDDR-------RGPHLDRDQCAYCKEKGHWARDCPKKTSRAQPPWPRRSLL M3X0L9/455-507 AAVVTEN----------------GTGKSGETK-------RRPKVGKDQCAYCKERGHWIKDCPKRPGNSKKPASVL--- 1wwdA00/1-56 ATVVSGQ----------------KQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 1wweA00/1-56 ATVVSGQ----------------KQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 1wwfA00/1-56 ATVVSGQ----------------KQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL 1wwgA00/1-56 ATVVSGQ----------------KQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P03332/479-534 ATVVSGQ----------------KQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q8UN00/479-534 ATVVSGQ----------------RQDRQGGER-------RRSQLDRDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q7ZKZ8/1-33 ----------------------------------------------DQCAYCKERGHWARDCPKKPSGLRRPHPQTSLL P29168/477-532 ATVVTGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P11269/478-533 ATVVTGQ----------------RQDRQGGER-------KRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL A0A068EUF8/478-533 ATVVSGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P03336/478-533 ATVVSGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL P21416/463-515 --------------------STGRQTGNLSNQAKKTPRDGRPPLDKDQCAYCKEKGHWARECPRKKHVREAKV------ Q83371/169-224 ATVVIGQ----------------EQDRQEGER-------KRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL O89811/520-576 ATVVAQNR------------DKDREESKLGDQ-------RKIPLGKDQCAYCKEKGHWVRDCPKRPRKKPANSTLL--- A7LKA6/491-543 AAVVTEN----------------RTGKSGETK-------RRPKIEKDQCAYCKERGHWIKDCPKRPRDSKKSTPVL--- P21435/481-536 ATVVSGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q9E7M1/477-532 ATVVSGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q5PYI3/474-529 ATVVSSQ----------------RQDRQGGER-------KRPQLEKDQCAYCKEKGHWARDCPKKPRGPRGPRPQTSLL O70651/457-516 AAVVNKEG------------SKNKQTGNLSDRARKTPREGRPPLDKDQCAYCKEKGHWARECPRKKNIREAK------- I6R7B0/478-537 AAVVNEKGQEQT-------QSRAKRSGNLGN---------RTPLDKDQCSYCKEKGHWARECPKLKRKNGSSKKVL--- Q27ID9/477-532 ATVVIGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL D0UFA4/477-532 ATVVIGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q6UJZ3/454-515 AAVVEGKSNRERERDFRKIRSGPRQSGNLGN---------RTPLDKDQCAYCKEKGHWARDCPKKGNKGLK-------- A0A126QCH6/481-536 ATVVSGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q83378/460-512 AAVVQGQ---------------EKRGERVGVR-------KGPKLDKDQCAYYKERGHWARDCPKKPSGSEDPAHR---- P27460/477-532 ATVVSGQ----------------KQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL Q85559/53-89 AAVVTEK----------------RAGKSGETR-------RRPKVDKDQCAYCKERGHWSR------------------- P10262/520-576 ATVVAQNR------------DKDREENKLGDQ-------RKIPLGKDQCAYCKEKGHWVRDCPKRPRKKPANSTLL--- Q9TTC2/456-516 AAVVSEKG------------FRGRQAGNLSNRAMRAPREGRPPLDKDQCAYCKERGHWARECPRKKNARETNV------ P26807/480-535 ATVISGQ----------------RQDRQGGER-------RRPQLDHDQCAYCKEKGHWARDCPKKPRGPRGPRPQASLL A0A1D8DE58/477-521 ATVVIGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKETGHWAKDCPRP-----------GIA P29167/478-533 ATVVTGQ----------------RQDRQGGER-------RRPQLDKDQCAYCKEKGHWAKDCPKKPRGPRGPRPQTSLL #=GC scorecons 6466243000000000000000055343354400000004644767899898997999677887644433332222111 #=GC scorecons_70 *_**____________________________________*__**********************______________ #=GC scorecons_80 ___________________________________________*_*************__****_______________ #=GC scorecons_90 ______________________________________________********_***___**________________ //