# STOCKHOLM 1.0
#=GF ID 4.10.280.10/FF/1271
#=GF DE HLH-30, isoform f
#=GF AC 4.10.280.10/FF/1271
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 22.050
#=GS H2KZZ2/274-355  AC H2KZZ2
#=GS H2KZZ2/274-355  OS Caenorhabditis elegans
#=GS H2KZZ2/274-355  DE Helix Loop Helix
#=GS H2KZZ2/274-355  DR GENE3D; 3550a62a6bb7fd7b61144c6f4f2d19f8/274-355; 
#=GS H2KZZ2/274-355  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H2KZZ2/274-355  DR GO; GO:0000981; GO:0005634; GO:0005737; GO:0006357; GO:0008340; GO:0010506; GO:0010628; GO:0045944; GO:0050829; GO:0050830; GO:1902477; 
#=GS H2KZZ1/249-330  AC H2KZZ1
#=GS H2KZZ1/249-330  OS Caenorhabditis elegans
#=GS H2KZZ1/249-330  DE Helix Loop Helix
#=GS H2KZZ1/249-330  DR GENE3D; 1327cd171f2a5891342c51a520b9067d/249-330; 
#=GS H2KZZ1/249-330  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H2KZZ1/249-330  DR GO; GO:0000981; GO:0005634; GO:0006357; 
#=GS Q86MJ4/214-295  AC Q86MJ4
#=GS Q86MJ4/214-295  OS Caenorhabditis elegans
#=GS Q86MJ4/214-295  DE Helix Loop Helix
#=GS Q86MJ4/214-295  DR GENE3D; c7493b20c7c21d2ee7ff939ede054a38/214-295; 
#=GS Q86MJ4/214-295  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q86MJ4/214-295  DR GO; GO:0000981; GO:0006357; 
#=GS H2KZZ0/248-329  AC H2KZZ0
#=GS H2KZZ0/248-329  OS Caenorhabditis elegans
#=GS H2KZZ0/248-329  DE Helix Loop Helix
#=GS H2KZZ0/248-329  DR GENE3D; 1d62fe9f6fd50349ed3cddb04856281c/248-329; 
#=GS H2KZZ0/248-329  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H2KZZ0/248-329  DR GO; GO:0000981; GO:0006357; 
#=GS Q5TYL0/111-192  AC Q5TYL0
#=GS Q5TYL0/111-192  OS Caenorhabditis elegans
#=GS Q5TYL0/111-192  DE Helix Loop Helix
#=GS Q5TYL0/111-192  DR GENE3D; 52b3be8f446418bb1dfc127f6365a3a7/111-192; 
#=GS Q5TYL0/111-192  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q5TYL0/111-192  DR GO; GO:0000981; GO:0006357; 
#=GS H2KZZ4/248-329  AC H2KZZ4
#=GS H2KZZ4/248-329  OS Caenorhabditis elegans
#=GS H2KZZ4/248-329  DE Helix Loop Helix
#=GS H2KZZ4/248-329  DR GENE3D; 65280cf4fed68b4d8d6721886f4729ec/248-329; 
#=GS H2KZZ4/248-329  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H2KZZ4/248-329  DR GO; GO:0000981; GO:0006357; 
#=GS H2KZZ3/223-304  AC H2KZZ3
#=GS H2KZZ3/223-304  OS Caenorhabditis elegans
#=GS H2KZZ3/223-304  DE Helix Loop Helix
#=GS H2KZZ3/223-304  DR GENE3D; 1c4a00189dfc4088010926bfca8d6bbf/223-304; 
#=GS H2KZZ3/223-304  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS H2KZZ3/223-304  DR GO; GO:0000981; GO:0006357; 
#=GS Q86MJ3/189-270  AC Q86MJ3
#=GS Q86MJ3/189-270  OS Caenorhabditis elegans
#=GS Q86MJ3/189-270  DE Helix Loop Helix
#=GS Q86MJ3/189-270  DR GENE3D; 37dd2069cb1ba49cdcbe8044991dc8db/189-270; 
#=GS Q86MJ3/189-270  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q86MJ3/189-270  DR GO; GO:0000981; GO:0006357; 
#=GS G0N230/248-304  AC G0N230
#=GS G0N230/248-304  OS Caenorhabditis brenneri
#=GS G0N230/248-304  DE CBN-HLH-30 protein
#=GS G0N230/248-304  DR GENE3D; 517c731e4bfbce86acdf737dc6c7eeab/248-304; 
#=GS G0N230/248-304  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GF TC -3.3 5.7E+00
#=GF SQ 9
H2KZZ2/274-355          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
H2KZZ1/249-330          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
Q86MJ4/214-295          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
H2KZZ0/248-329          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
Q5TYL0/111-192          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
H2KZZ4/248-329          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
H2KZZ3/223-304          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
Q86MJ3/189-270          --------------RRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQAMKTQQQQKSLESTAHKYADRVKELEEMLARQG
G0N230/248-304          RDRRKKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVL---------------------------------------
#=GC scorecons          000000000000009999999999999999999999999999999999999999999222222222222222222222222222222222222222
#=GC scorecons_70       ______________*******************************************_______________________________________
#=GC scorecons_80       ______________*******************************************_______________________________________
#=GC scorecons_90       ______________*******************************************_______________________________________
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