# STOCKHOLM 1.0 #=GF ID 3.80.10.10/FF/31663 #=GF DE Outer membrane protein YopM #=GF AC 3.80.10.10/FF/31663 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 12.055 #=GS 1g9uA00/34-386 AC P17778 #=GS 1g9uA00/34-386 OS Yersinia pestis #=GS 1g9uA00/34-386 DE Outer membrane protein YopM #=GS 1g9uA00/34-386 DR CATH; 1g9u; A:34-386; #=GS 1g9uA00/34-386 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS 1jl5A00/34-386 AC P17778 #=GS 1jl5A00/34-386 OS Yersinia pestis #=GS 1jl5A00/34-386 DE Outer membrane protein YopM #=GS 1jl5A00/34-386 DR CATH; 1jl5; A:1034-1386; #=GS 1jl5A00/34-386 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A0A0H3NWE0/34-344 AC A0A0H3NWE0 #=GS A0A0H3NWE0/34-344 OS Yersinia enterocolitica subsp. palearctica Y11 #=GS A0A0H3NWE0/34-344 DE Type III secretion possible injected virulence protein (YopM) / internalin, putative #=GS A0A0H3NWE0/34-344 DR GENE3D; 9ed35e62121db898796a46648d03ecd6/34-344; #=GS A0A0H3NWE0/34-344 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; Yersinia enterocolitica subsp. palearctica; #=GS P74988/34-344 AC P74988 #=GS P74988/34-344 OS Yersinia enterocolitica #=GS P74988/34-344 DE Yop effector YopM #=GS P74988/34-344 DR GENE3D; 9ed35e62121db898796a46648d03ecd6/34-344; #=GS P74988/34-344 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; #=GS A0A0E1NR08/34-386 AC A0A0E1NR08 #=GS A0A0E1NR08/34-386 OS Yersinia pestis Antiqua #=GS A0A0E1NR08/34-386 DE Outer membrane protein yopM #=GS A0A0E1NR08/34-386 DR GENE3D; b7aa3d70ded193346632c6962dc0a691/34-386; #=GS A0A0E1NR08/34-386 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS A0A154LRL8/34-386 AC A0A154LRL8 #=GS A0A154LRL8/34-386 OS Yersinia pestis #=GS A0A154LRL8/34-386 DE Uncharacterized protein #=GS A0A154LRL8/34-386 DR GENE3D; b7aa3d70ded193346632c6962dc0a691/34-386; #=GS A0A154LRL8/34-386 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GS P17778/34-386 AC P17778 #=GS P17778/34-386 OS Yersinia pestis #=GS P17778/34-386 DE Outer membrane protein YopM #=GS P17778/34-386 DR GENE3D; b7aa3d70ded193346632c6962dc0a691/34-386; #=GS P17778/34-386 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; #=GF TC 0.0 0.0E+00 #=GF SQ 7 1g9uA00/34-386 KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNS 1jl5A00/34-386 KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNS A0A0H3NWE0/34-344 KSKAEYYNAWSEWERNAPPGNGEQRGMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLQVDNNNLKALSDLPPLLEYLGAANNQLEELPELQNSSFLTSIDVDNNSLKTLPDLPPSLEFLAAGNNQLEELSELQNLPFLTAIYADNNS------------------------------------------LKTLPDLPPSLKTLNVRENYLTDLPELPQSLTFLDVSDNIFSGLSELPPNLYNLNASSNEIRSLCDLPPSLVELDVRDNQLIELPALPPRLERLIASFNHLAEVPELPQNLKLLHVEYNALREFPDIPESVEDLRMDS P74988/34-344 KSKAEYYNAWSEWERNAPPGNGEQRGMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLQVDNNNLKALSDLPPLLEYLGAANNQLEELPELQNSSFLTSIDVDNNSLKTLPDLPPSLEFLAAGNNQLEELSELQNLPFLTAIYADNNS------------------------------------------LKTLPDLPPSLKTLNVRENYLTDLPELPQSLTFLDVSDNIFSGLSELPPNLYNLNASSNEIRSLCDLPPSLVELDVRDNQLIELPALPPRLERLIASFNHLAEVPELPQNLKLLHVEYNALREFPDIPESVEDLRMDS A0A0E1NR08/34-386 KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNS A0A154LRL8/34-386 KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNS P17778/34-386 KSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLREFPDIPESVEDLRMNS #=GC scorecons 99969999999999999999999995999999999999999999999999999999999999999999999999999999999499999999999999999999559999959999999999559999999995999999999969999999999599999999999999999222222222222222222222222222222222222222222999999999995699996999999999999999999969999999999999959999999999999999994996956969999999999999999999999999999999949999995999999999999999969 #=GC scorecons_70 ***_*********************_*********************************************************_********************__*****_**********__*********_**********_**********_*****************__________________________________________***********__***************************************_******************_**_*__*_********************************_******_****************_* #=GC scorecons_80 ***_*********************_*********************************************************_********************__*****_**********__*********_**********_**********_*****************__________________________________________***********__****_*******************_**************_******************_**_*__*_********************************_******_****************_* #=GC scorecons_90 ***_*********************_*********************************************************_********************__*****_**********__*********_**********_**********_*****************__________________________________________***********__****_*******************_**************_******************_**_*__*_********************************_******_****************_* //