# STOCKHOLM 1.0 #=GF ID 3.80.10.10/FF/13424 #=GF DE F-box protein SKIP17 #=GF AC 3.80.10.10/FF/13424 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 72.571 #=GS Q0WRC9/94-392 AC Q0WRC9 #=GS Q0WRC9/94-392 OS Arabidopsis thaliana #=GS Q0WRC9/94-392 DE F-box protein SKIP17 #=GS Q0WRC9/94-392 DR GENE3D; caa260fcef655336cf87f3ad9d582e82/94-392; #=GS Q0WRC9/94-392 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q0WRC9/94-392 DR GO; GO:0005515; #=GS V4L2Q2/102-407 AC V4L2Q2 #=GS V4L2Q2/102-407 OS Eutrema salsugineum #=GS V4L2Q2/102-407 DE Uncharacterized protein #=GS V4L2Q2/102-407 DR GENE3D; 3bf035f1469c06140f2e20744959a48d/102-407; #=GS V4L2Q2/102-407 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A1J3HK86/152-297_331-457 AC A0A1J3HK86 #=GS A0A1J3HK86/152-297_331-457 OS Noccaea caerulescens #=GS A0A1J3HK86/152-297_331-457 DE F-box protein SKIP17 #=GS A0A1J3HK86/152-297_331-457 DR GENE3D; 5508ff0366ee0ad0d6b0c9176b712c3b/152-297_331-457; #=GS A0A1J3HK86/152-297_331-457 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS A0A0D3B8R9/92-402 AC A0A0D3B8R9 #=GS A0A0D3B8R9/92-402 OS Brassica oleracea var. oleracea #=GS A0A0D3B8R9/92-402 DE Uncharacterized protein #=GS A0A0D3B8R9/92-402 DR GENE3D; 5b9dd6dd677d26eb80f3018a42b847a1/92-402; #=GS A0A0D3B8R9/92-402 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A078GAM9/99-402 AC A0A078GAM9 #=GS A0A078GAM9/99-402 OS Brassica napus #=GS A0A078GAM9/99-402 DE BnaA09g01060D protein #=GS A0A078GAM9/99-402 DR GENE3D; 5d84dce13e2b1b7476b80c47eefcf263/99-402; #=GS A0A078GAM9/99-402 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078FTZ9/92-398 AC A0A078FTZ9 #=GS A0A078FTZ9/92-398 OS Brassica napus #=GS A0A078FTZ9/92-398 DE BnaC03g30670D protein #=GS A0A078FTZ9/92-398 DR GENE3D; 6e172016653b3889039facf500320a4f/92-398; #=GS A0A078FTZ9/92-398 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078FYA7/117-423 AC A0A078FYA7 #=GS A0A078FYA7/117-423 OS Brassica napus #=GS A0A078FYA7/117-423 DE BnaC03g30680D protein #=GS A0A078FYA7/117-423 DR GENE3D; 7c578d91a6a799caffb4e8577b0052c9/117-423; #=GS A0A078FYA7/117-423 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4C9I6/117-421 AC M4C9I6 #=GS M4C9I6/117-421 OS Brassica rapa subsp. pekinensis #=GS M4C9I6/117-421 DE Uncharacterized protein #=GS M4C9I6/117-421 DR GENE3D; 7ce664f893903963e3e7f27f3e355b57/117-421; #=GS M4C9I6/117-421 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A0D3B8R8/140-443 AC A0A0D3B8R8 #=GS A0A0D3B8R8/140-443 OS Brassica oleracea var. oleracea #=GS A0A0D3B8R8/140-443 DE Uncharacterized protein #=GS A0A0D3B8R8/140-443 DR GENE3D; 889713ebab25012390889d8ce94a5ef6/140-443; #=GS A0A0D3B8R8/140-443 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A078FXX5/91-396 AC A0A078FXX5 #=GS A0A078FXX5/91-396 OS Brassica napus #=GS A0A078FXX5/91-396 DE BnaC03g30710D protein #=GS A0A078FXX5/91-396 DR GENE3D; b85bc962cf3dfe25bd1d3ed3d9d84831/91-396; #=GS A0A078FXX5/91-396 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS R0GUY9/100-385 AC R0GUY9 #=GS R0GUY9/100-385 OS Capsella rubella #=GS R0GUY9/100-385 DE Uncharacterized protein #=GS R0GUY9/100-385 DR GENE3D; bdd078465df76c4014f8241089a22545/100-385; #=GS R0GUY9/100-385 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A078FYX0/108-410 AC A0A078FYX0 #=GS A0A078FYX0/108-410 OS Brassica napus #=GS A0A078FYX0/108-410 DE BnaC03g30690D protein #=GS A0A078FYX0/108-410 DR GENE3D; bdd654faf001e6fde4b7b27f69913158/108-410; #=GS A0A078FYX0/108-410 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS D7M3D8/100-396 AC D7M3D8 #=GS D7M3D8/100-396 OS Arabidopsis lyrata subsp. lyrata #=GS D7M3D8/100-396 DE Putative uncharacterized protein #=GS D7M3D8/100-396 DR GENE3D; cc5a6a6d6db8790c00b4d3d0f196aece/100-396; #=GS D7M3D8/100-396 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A078JIL3/117-424 AC A0A078JIL3 #=GS A0A078JIL3/117-424 OS Brassica napus #=GS A0A078JIL3/117-424 DE BnaA03g57250D protein #=GS A0A078JIL3/117-424 DR GENE3D; e07c9bc70aaa12bc9d2f059619c6523f/117-424; #=GS A0A078JIL3/117-424 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A087GLX9/100-407 AC A0A087GLX9 #=GS A0A087GLX9/100-407 OS Arabis alpina #=GS A0A087GLX9/100-407 DE Uncharacterized protein #=GS A0A087GLX9/100-407 DR GENE3D; fb6815076a1bb35442d99c1d07b5583d/100-407; #=GS A0A087GLX9/100-407 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GF TC 579.1 4.3E-178 #=GF SQ 15 Q0WRC9/94-392 NSWSLPPELTIKVFSMLDTKSMMQAAVCCTMFNKCAMDRLCYSHIDLTTSARYADKGVVSTMINRAGKELRSLKLGRVVRTAGSDSAAP--LLSGSCLSPLAYNHGFLGSRLRSLRLYNLRPIKYRSLCDALSVCPNITDLRIVGLYNLTEELFNSLTKKCRLIEHLFLETYGYP-RTLESKAGSSLVEFVTNCPNLTSLTLIRFGLTDDWARNLAESCRKLKYLNLSRSPTIKGRFLRELGLSCKENLLKTLILRSCPKLQEKEVLEFCNSLLTGNFKSIRQIDVSSNSGLASSDRGKRCN----------------- V4L2Q2/102-407 ---FLPPELTIKVFSMLDTKSLMQAAACCKMFNNCAMDRLSYAHIDLTTATKQADHSVVCTMIHRAGKELRSLKLGPVARPAGSDPTLT--FVTWPFLSPLCYNHGFLGSRLRSLRLYNIRPMNLSSLRDVLSVFSNLTDLRIVGLISPFMHLFKTLSEKCRLIENLCLETYQFP-GIIDTKMGSPLVEFVTNSPNLISLTLIYFPLTDEMARTLVESSRKLKYLNLSRSSTINGRFLRDLGNSCKDSPFKTLVLRNCPNLLEKEVLKLCNSLLKGNFKSIRHIDVSNNCGLVSEF-GDRTSKPKFPLEKLKE------ A0A1J3HK86/152-297_331-457 ---FLPPELTIKVFSMLDTKSLVQAAACCTMFNNCAMDRLSYAHIDLTTATKQTDNGVVNTMIHRAGKELRSIKLGSVTRSTGSNSSPS--LVPGPLLAPLSYNHGFLGSRLRSLQLYNLRQVNYNSLSEVLSVCPNIIDLRIVGLCTPYM----------------------------------PLLEFVTNSLKLTSLTLIGFRLTEEMARKLVESCRKLKYLNLSRSPTIKGRFLRDLTHSRKGNPLETIILRNCPSLHEKEVLELCNSILKGNFKSIRHIDVSNNRGLDVDF-GDRSYKPKFPLEKLKE------ A0A0D3B8R9/92-402 ---VLPPELTVKVFSKLDTKSLMQAATCCTVFNKCAMDRSSYAHIDLTTATKQADNEVVCTMIHRAGKELRSLKLGHVTRRYGPDPAPTSIWFNGPFLSSLAYNNGFLGNRLRSLRLYNIRWMTCSSSFEVFSFCSNLTDLRIVGSNCPFRQLFMILTKKCRLIEHLCLGTYFPL-GNIDASTASHLIELVTKSPNLTSLTLLCFQLTNDMARNLVESCRKLKYLNFSRSPKINGHFLRDLGNSCKESPLETLIMRNCVKLEEKEVLELCNTLLKGNFKFIRHIDVSSNNGLVSDD-GRRSYKPKFPVEKLKEERP--- A0A078GAM9/99-402 ---FLPPDLTIKVFSMLDTKSLMQASVCCTMFNKCAMDRLCYTHIDLTT----ADSGVVCIMIHRAGKELRSLKLGRVARSDGSDPTPS--LLNGSFLSPLSYNHGFLGSRLRSLRLYNIRPINCTSFTEVLSVCSNLTDLRITGLNCPVMLLFKTLREKCRLIENLCLEAYQAS-GTVDAKTGSPLIEFVTNSYNLTSLTLISFRLTDGLALNLAESSSKLKYLNLSRSPTLNGRFLRDLGHSCKESSLKTLIMRNCYNLQEKEVMELCNSLLKGKFKSIRHIDVSSNNGLLTN--GVRFYKPELPLKKLKEERS--- A0A078FTZ9/92-398 ---VLPPELTVKVFSKLDTKSLMQAAACCTMFNKCAMDRSSYAHIDLTT----ADNEVVCTMIHRAGKELRSIKLGHVTRRYGPDPAPTSIWFNGPFLSSLAYNNGFLGSRLRSLRLYNIRWMTSSSSFEVFSFCSNLTDLRIVGSNCPFRQLFMTLTKKCRLIEHLCLGTYFPLVGTMDASTVSHLIELVTKSPNLTSLTLLCFQLTNEMARNLVESCRKLKYLNFSRSPKINGHFLRDLGNSCKESPLQTLVMRNCVKLEEKEVLELCNTLLKGNFKFIRHIDVSSNNGLVSDD-GRRSYKPKFPVEKLKEER---- A0A078FYA7/117-423 ---VLPPELTVKVFSKLDTKSLMQAAACCTMFNKCAMDRSSYAHIDLTT----ADNEVVCTMIHRAGKELRSIKLGHVTRRYGPDPAPTSIWFNGPFLSSLAYNNGFLGSRLTSLRLYNVGPMHYSS---VLSVCSNLTDLRIVGSNSPYMNLFMTLSKKCRLIEHLCLVSHHPL-GNIDASTASHLIELVTKSPNLTSLTLLCFQLTSEIVRSLVESCRKLKYLNLSRSPKIDGCFLRDLGNSCKESPLETLIMRNCVKLEEKEVLELCNSLLKGNFKFIRHIDVSSNNGLVSDD-GRRSYKPKFPVEKLKEERPDVT M4C9I6/117-421 ---VLPPELTVKVFSKLDTKSLMQAAACCTVFNKCAMDRSSYAHIDLTT----ADNEVVCTMIHRAGKELRSIKLGHVTRRYGPEPNPNPIWFNGPFLSSLSYNHGFLGSRLTSLRLYNVGPMHYNSLSSVLSVCSNLTDLRIVGSNSPYMNLFMTLSKKCRLIEHLCLVSYHPL-GNIDASTASHLIELVTKSPNLTSLTLLCFQLTNEIVRSLVESSRKLKYLNLSRSPKIDGRFLRDLGNSCKESPLETLIMRNCVKLEEKEVLELCNSLLKGNFKFIRHIDVSSNNGLVSDD-GRRSYKPKFPVEKLKEE----- A0A0D3B8R8/140-443 ---FLPPELTIKVFSKLDTKSLMQAAACCTLFNKCAMDRSSYAHIDLTT----ADNEVVCTMIHRAGKELRSLKLGHVTRRHGPAPAP--IWFNGPFLSSLSYNHGFLWNRLRSLRLYNIRWMTCSSSFEVFSFCSNLTDLRIVGSNCPFRQLFMILTKKCRLIEHLCLGTYFPL-GNIDASTASHLIELVTKSPNLTSLTLLCFQLTNDMARNLVESCRKLKYLNFSRSPKINGHFLRDLGNSCKESPLETLIMRNCVKLEEKEVLELCNTLLKGNFKFIRHIDVSSNNGLVSDD-GRRSYKPKFPVEKLKEER---- A0A078FXX5/91-396 ---FLPPELTVKVFSMVDTKSLMRAAACCTMFNKCAMDRFAYAHVDLTTATSQVDIKVVCNLIHRAGKELRSLKLGSLARPYPSDFNPS--LVNGPFLSTLSRNPDFIGNRLKSLGLYNIRSMNHNSSFEVLSVCSNLTDLRIVGLNNPFMHLFKILTEKCRLIEHLCIETSQLL-STIDTVKGSHLIKFVTNSPNLTSLRLIRFRLTDEVARILAQSSRTLEYLNLSRSSTINGRFLRDVRNSCKESPLKSLIVRNCLKLQEKEVLELCNSLIKGNFKSIRHIDVSNNRGLVSDD-GKRSYKPKFPLEKLKE------ R0GUY9/100-385 ---FLPPELTIKVFSMLDTKSMMQASACCTMFNKCAIDRLCYSHIDLTTSARYADKGIVSTVINRAGKELRSLKIGRVVRAGGSDSATP--MLSGSCLSPLAYNHGFLGSRLRSLQLYNLRPIKYRSLCDALAVCQNITDLRIVGLYNLTEELFNSLTIKCRLIEQLFLETYGYP-RTLEAKTGSSLVEFVTNCPNLTSLTLIRFGLTDEWARNLAESPRKLEYLNLSRSPTIKGRFLRELGLGCKDRLLKTLILRNCPKLQEKEVLEFCNSLLRGNFKSIRRIDVSSNRGL--------------------------- A0A078FYX0/108-410 ---FLPPELTIKVFSKLDTKSLMQAAACCTMFNKCAMDRSSYAHIDLTT----ADNEVVCTMIHRAGKELRSLKLGHVTRRHGPAPAP--IWFNGPFLSSLSYNHGFLWSRLRSLRLYNIRWMTCSSSFEVLSFCSNLTDLRIVGSNCPFRQLFMTLTKKCRLIEHLCLGTYFPLVGTMDASTVSHLIELVTNSPNLTSLTLIGFQLTNEMARNLVESSQKLKYLNLSRSPKINGHFLRDLGNSCKESPLETLIMRNCVKLEEKEVLELCNSLLKGNFKFIRHIDVSSNNGLVSDD-GQRSYKPKFPVEKLKE------ D7M3D8/100-396 ---FLPPELTIKVFSMLDTKSLMQAAVCCTMFNKCAMDRLCYSHIDLTTSARYADKGVVSTMINRAGKELRSLKLGRVVRTAGSDSTAP--LLSGSCLSPLAYNHGFLGSRLRSLRLYNLRPMKYRSLCDALSVCPNITDLRIVGLYNLTEELFNSLTKKCRLIENLFLETYGYP-RTLETKTGSSLVEFVTNCPNLTSLTLIRFGLTDDWARNLADSCRKVKYLNLSRSPTIKGRFLREVGPSCKESLLKTLILRNCPKLQEKEMLEFCNSLLTGSFKSIRHIDISSNRGLASSDRGKRCNK---------------- A0A078JIL3/117-424 ---VLPPELTVKVFSKLDTKSLMQAAACCTMFNKCAMDRSSYAHIDLTT----ADNEVVCTMIHRAGKELRSIKLGHVTRRYGPEPNPNPIWFNGPFLSSLSYNHGFLGSRLTSLRLYNVGPMHYNSLSSVLSVCSNLTDLRIVGSNSPYMNLFMTLSKKCRLIEHLCLVSYHPL-GNIDASTASHLIELVTKSPNLTSLTLLCFQLTNEIVRNLVESSRKLKYLNLSRSPKIDGCFLRDLGNSCKESPLETLIMRNCVKLEEKEVLELCNSLLEGNFKFIRHIDVSSNNGLVSDD-GRRSYKPKFPVEKLKEERPD-- A0A087GLX9/100-407 ---FLPQELTIKVFSMLDTKSLMQASASCTMFNKCAMDRLCYSNIDLTTSAKHADNGVVCTMIHRAGKELRSLKLGRVVRPVGSDSTAS--LLTGSCLSPLSYNHGFVGSRLRSLRLYNLRPMNCKSLCDALSVCSNITDLRIVGLYILSEQLFKTLATKCRFIENLFLEAYGCQ-CTLDTKTGSALVEFVTNCPNLSSLTLIRFGLNGQMSRNLAESSRKLKYMNLSRSPTIKGRFLRDLGVSCKDGPLKTLILRNCPALEEKDVLEFCNSLITGDFKSIQHIDVSNNRGLASAG-GKRSYKPNFPLEKLKEER---- #=GC scorecons 0005998899799995899997889668987997998994596889999121179558967796999999996989485943866555301455865985957968977799699699957464549435678686968999989544644377347447776774746456233044465354749686996668979989649498564675967957887989799975859699977748796568588869894595998888699787596995987998969499454307374565445345555110000 #=GC scorecons_70 ____***********_***********************__*_******____**__**_****************_*_*__*___________*__**_*_*****************_*_*___*___*****_*********_______**__*__******_*_*_______________*_*****************_*_**_*_**_*_**_************_*_*_******_****__*_*******__*_************_****_*********_**_____*_*___________________ #=GC scorecons_80 ____***********_*********__************__*_******____**__**_***_********_***_*_*__*___________*__**_*_**_*******_**_***_______*____**_*_*_*******_______**__*__***_**_*_________________*_*_*_**___*******__*_**____*_*_**_************_*_*_*****__***___*_***_***__*_******_*****_*_**_*******_*_**_____*_*___________________ #=GC scorecons_90 ____******_****_*****_***__***_**_*****__*_******_____*__**___*_********_***_*_*_________________*__*__*_**___**_**_***_______*_____*_*_*__******_________________________________________*_*_**____*_**_*__*_**______*__*___*_***_***__*_*_***____*_*___*_***_***__*_******_**_*__*_**_**_****_*_**___________________________ //