# STOCKHOLM 1.0
#=GF ID 3.80.10.10/FF/105743
#=GF DE Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
#=GF AC 3.80.10.10/FF/105743
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 74.177
#=GS H0YMX3/59-326      AC H0YMX3
#=GS H0YMX3/59-326      OS Homo sapiens
#=GS H0YMX3/59-326      DE Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
#=GS H0YMX3/59-326      DR GENE3D; 24aa0d9450cd3761f0e83dbb9fe84f83/59-326; 
#=GS H0YMX3/59-326      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS H3BQ49/34-178      AC H3BQ49
#=GS H3BQ49/34-178      OS Homo sapiens
#=GS H3BQ49/34-178      DE Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
#=GS H3BQ49/34-178      DR GENE3D; 7c2ff4c0b5d5033f7353de75aaf92afc/34-178; 
#=GS H3BQ49/34-178      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A140LGH2/52-416  AC A0A140LGH2
#=GS A0A140LGH2/52-416  OS Danio rerio
#=GS A0A140LGH2/52-416  DE Leucine-rich repeat and Ig domain-containing 2a
#=GS A0A140LGH2/52-416  DR GENE3D; bb2c4aabb5e918011203144eeab4d400/52-416; 
#=GS A0A140LGH2/52-416  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Cypriniphysae; Cypriniformes; Cyprinoidea; Cyprinidae; Danio; Danio rerio; 
#=GS A0A140LGH2/52-416  DR GO; GO:0021628; GO:0071699; 
#=GS F1Q7V7/57-421      AC F1Q7V7
#=GS F1Q7V7/57-421      OS Danio rerio
#=GS F1Q7V7/57-421      DE Leucine-rich repeat and Ig domain-containing 2a
#=GS F1Q7V7/57-421      DR GENE3D; dc6f2665e366289f3039a0f4308fefdb/57-421; 
#=GS F1Q7V7/57-421      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Cypriniphysae; Cypriniformes; Cyprinoidea; Cyprinidae; Danio; Danio rerio; 
#=GS F1Q7V7/57-421      DR GO; GO:0021628; GO:0071699; 
#=GS A0A1D5R3T9/59-326  AC A0A1D5R3T9
#=GS A0A1D5R3T9/59-326  OS Macaca mulatta
#=GS A0A1D5R3T9/59-326  DE Uncharacterized protein
#=GS A0A1D5R3T9/59-326  DR GENE3D; 15906c95cedf507a6a9a64fd2f44176f/59-326; 
#=GS A0A1D5R3T9/59-326  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS A0A0S7JR87/47-235  AC A0A0S7JR87
#=GS A0A0S7JR87/47-235  OS Poeciliopsis prolifica
#=GS A0A0S7JR87/47-235  DE LIG1B
#=GS A0A0S7JR87/47-235  DR GENE3D; 209d6d082de0fccacb58c0e5f0c20d8d/47-235; 
#=GS A0A0S7JR87/47-235  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Poeciliopsis; Poeciliopsis prolifica; 
#=GS W5NUU5/54-412      AC W5NUU5
#=GS W5NUU5/54-412      OS Ovis aries
#=GS W5NUU5/54-412      DE Uncharacterized protein
#=GS W5NUU5/54-412      DR GENE3D; 39e0a0158259b0ccba89eac82f80abcc/54-412; 
#=GS W5NUU5/54-412      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS H0YPX6/34-340      AC H0YPX6
#=GS H0YPX6/34-340      OS Taeniopygia guttata
#=GS H0YPX6/34-340      DE Uncharacterized protein
#=GS H0YPX6/34-340      DR GENE3D; 3fb02779b8c7d9ad26041870e4ad88f9/34-340; 
#=GS H0YPX6/34-340      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia; Taeniopygia guttata; 
#=GS A0A0S7LU14/33-156  AC A0A0S7LU14
#=GS A0A0S7LU14/33-156  OS Poeciliopsis prolifica
#=GS A0A0S7LU14/33-156  DE LIGO2
#=GS A0A0S7LU14/33-156  DR GENE3D; 44cde6765cec797da87237feaa9fbe1b/33-156; 
#=GS A0A0S7LU14/33-156  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Poeciliopsis; Poeciliopsis prolifica; 
#=GS Q4T109/26-154      AC Q4T109
#=GS Q4T109/26-154      OS Tetraodon nigroviridis
#=GS Q4T109/26-154      DE Chromosome 1 SCAF10759, whole genome shotgun sequence
#=GS Q4T109/26-154      DR GENE3D; a4d447e6afdda5f0d9b7fb015eeff673/26-154; 
#=GS Q4T109/26-154      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Tetraodon; Tetraodon nigroviridis; 
#=GS G3WAD3/53-396      AC G3WAD3
#=GS G3WAD3/53-396      OS Sarcophilus harrisii
#=GS G3WAD3/53-396      DE Uncharacterized protein
#=GS G3WAD3/53-396      DR GENE3D; f194f294f7b7949b733e99bffc2fd8ed/53-396; 
#=GS G3WAD3/53-396      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Dasyuromorphia; Dasyuridae; Sarcophilus; Sarcophilus harrisii; 
#=GS A0A060W3C4/33-156  AC A0A060W3C4
#=GS A0A060W3C4/33-156  OS Oncorhynchus mykiss
#=GS A0A060W3C4/33-156  DE Uncharacterized protein
#=GS A0A060W3C4/33-156  DR GENE3D; 40f83f92f50d8f5b2e25198b2c2ecc35/33-156; 
#=GS A0A060W3C4/33-156  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus; Oncorhynchus mykiss; 
#=GF TC 253.1 6.7E-80
#=GF SQ 12
H0YMX3/59-326              ---------------AVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGG----------------------------------------------------------------------------------------------------
H3BQ49/34-178              -TGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A0A140LGH2/52-416          ---------------SVICHRKRYTAIPDGVPLETRILDLSKNRIQAVNPDDFAAYPHIEELDLSGNIIAYVEPGAFNSLYSLHSLSLKSNRIKLLSLGVFTGLSNLTNLDISDNKVVILVDYMFQDLRNLRSLDVGDNELVYISHRAFSGLLSLESLTLERCNLTVVPTDALSHLHNLVSLHMRYLTISTLHPYSFKKLFHLRHLEIDNWPSLDVFPANSLHGLNLTTLSVTNTNLSTFPYQALHHLPYLTHLNLSYSRIRTVEGGLLQNLVRLRELRLAGSHLVSIEPYAFQGIRWLRLLNISHNRLDTLEKGAFHAPEALQVLLINNNPLVCDCRLMWLLQRHHSISFGDTQPECSSPEGSQRRQSKEFKEALLSNY---
F1Q7V7/57-421              ---------------SVICHRKRYTAIPDGVPLETRILDLSKNRIQAVNPDDFAAYPHIEELDLSGNIIAYVEPGAFNSLYSLHSLSLKSNRIKLLSLGVFTGLSNLTNLDISDNKVVILVDYMFQDLRNLRSLDVGDNELVYISHRAFSGLLSLESLTLERCNLTVVPTDALSHLHNLVSLHMRYLTISTLHPYSFKKLFHLRHLEIDNWPSLDVFPANSLHGLNLTTLSVTNTNLSTFPYQALHHLPYLTHLNLSYSRIRTVEGGLLQNLVRLRELRLAGSHLVSIEPYAFQGIRWLRLLNISHNRLDTLEKGAFHAPEALQVLLINNNPLVCDCRLMWLLQRHHSISFGDTQPECSSPEGSQRRQSKEFKEALLSNY---
A0A1D5R3T9/59-326          ---------------AVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGG----------------------------------------------------------------------------------------------------
A0A0S7JR87/47-235          ---------------SVMCHRKKLMTVPEGIPAETRLLDLSKNRIRTINPDEFANFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLRSNKLKLIQLGVFTGLSNLTELDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFIAHRAFHGLNSLEHLSLEKCNLSSVPTEAFTHLHSLITLKLRHLNINSIRDYSLE------VVKIKH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W5NUU5/54-412              ---------------AVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLILD---------LLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTC
H0YPX6/34-340              ---------------SVLCHRKRLTAIPEGIPTETRVLELNKNRIRCLNPGDLAPYPLLEELDFSENIISNVEPGAFSNLFNLQTLRLRGNQLKLIPPGVFTKLTNLTLLDISENKLVILLDYMFQDLRNLKSLEVGDNDLVYISQRAFSGLLGLEQLTIEKCNLTSISAESLSYLQNLEVLRLRHLSISALEDQNFKKLYNLLQLEIDNWPLLEEVSPTSFQGLNLTSLSITYTNITAVPAAALRNLVYLRSIGLSYNPISTVLRGFFEDLIRLQESN-------------------------------------------------------------WILQRRKTLNFDGEQPMCSSPPEIQGNALRDFPDSVLFEYFTC
A0A0S7LU14/33-156          SLGCPSRCECSAQTKAVVCHRKRMPTIPDGIPTETRILDLSKNKLTMINPDDFINFPGLEELDLSGNLISYVEPGAFNALFNMHSLSLKSNRIKLIPLGVFTALTNLTQLDISDNKIVILLDYM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q4T109/26-154              -LGCPSRCECSAQTKAVVCHRKRMPTIPDGVPTETRLLDLSKNKLTMINPDDFINFPGLEELDLSGNIISYVEPGAFNALFNMHSLSLKSNRIKLIPLGVFAGLTNLTQLDISDNKIVILLDYMFQDLHN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G3WAD3/53-396              ---------------SVLCHRKRFIAVPEGIPTETRLLDLGKNRIKTLNQDEFASYPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTAIPYVSVRHLVYLRFLNLSYNPILTIEGSMLHDLLRLQEIQLVGGQLMMVEPYAFRGLNYLRILNVSGNQLTTLEESAFHSVGNLETLI------------------------HKQQPTCATPEFVQGKEFKDFPDVLLPNYFTC
A0A060W3C4/33-156          ALGCPARCDCSAQSKSVLCHRKRLPSIPDGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNIISYVEPGAFNPLYSMHSLSLKSNRIKLIPMGVFTGLSNLTRLDVSDNNIVILLDYM-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
#=GC scorecons             00111011011110069599998446797979599969895997644595878747947979786697774899999859757669597897699767999869699949989797799979995555354344344443444433333233123313223233322222222233213213223232322222222212212112231222122111121212222212212112211121021122122112122211212111112112122121111110000000000000000000000000000000000000000000000000000000000000000000000011010010001000010100001001000
#=GC scorecons_70          ________________*_*****___******_***_***_****___*_****_**_******__****_*******_**_*__*_*********************_***************___________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
#=GC scorecons_80          ________________*_*****____*_***_***_***_***____*_*_*__**_****_*__**_*_*******_**____*_*_***_***_*****_*_***_****_**********___________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
#=GC scorecons_90          ________________*_*****____*_*_*_***_***_**_____*___*___*__*_*_*__*____******__*_____*_*__*__**___****_*_***_****_*__***_***___________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________________
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