# STOCKHOLM 1.0
#=GF ID 3.80.10.10/FF/105416
#=GF DE F-box protein SKP2A
#=GF AC 3.80.10.10/FF/105416
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 50.599
#=GS O49286/34-291      AC O49286
#=GS O49286/34-291      OS Arabidopsis thaliana
#=GS O49286/34-291      DE F-box protein SKP2B
#=GS O49286/34-291      DR GENE3D; d389ff8f44031b8fe866bd369cf22256/34-291; 
#=GS O49286/34-291      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS O49286/34-291      DR GO; GO:0010286; GO:0051603; GO:1901332; 
#=GS A0A178WNL6/34-291  AC A0A178WNL6
#=GS A0A178WNL6/34-291  OS Arabidopsis thaliana
#=GS A0A178WNL6/34-291  DE SKP2B
#=GS A0A178WNL6/34-291  DR GENE3D; d389ff8f44031b8fe866bd369cf22256/34-291; 
#=GS A0A178WNL6/34-291  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS V4KX76/66-287      AC V4KX76
#=GS V4KX76/66-287      OS Eutrema salsugineum
#=GS V4KX76/66-287      DE Uncharacterized protein
#=GS V4KX76/66-287      DR GENE3D; 0787d415532c7eadebf26418e858f9f1/66-287; 
#=GS V4KX76/66-287      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A078CT23/35-289  AC A0A078CT23
#=GS A0A078CT23/35-289  OS Brassica napus
#=GS A0A078CT23/35-289  DE BnaC06g21190D protein
#=GS A0A078CT23/35-289  DR GENE3D; 08906d5fd90658ddb7d8d5d26cd98b81/35-289; 
#=GS A0A078CT23/35-289  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A078DGP1/32-284  AC A0A078DGP1
#=GS A0A078DGP1/32-284  OS Brassica napus
#=GS A0A078DGP1/32-284  DE BnaA07g33240D protein
#=GS A0A078DGP1/32-284  DR GENE3D; 109699fae18c2f78dc188ca29caebd1e/32-284; 
#=GS A0A078DGP1/32-284  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A0D2ZTF9/36-288  AC A0A0D2ZTF9
#=GS A0A0D2ZTF9/36-288  OS Brassica oleracea var. oleracea
#=GS A0A0D2ZTF9/36-288  DE Uncharacterized protein
#=GS A0A0D2ZTF9/36-288  DR GENE3D; 196f288a552868c67f4b88d98eefa53c/36-288; 
#=GS A0A0D2ZTF9/36-288  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS A0A078DGD0/5-257   AC A0A078DGD0
#=GS A0A078DGD0/5-257   OS Brassica napus
#=GS A0A078DGD0/5-257   DE BnaC06g37800D protein
#=GS A0A078DGD0/5-257   DR GENE3D; 3743b63266c938304c4930ca0824ebec/5-257; 
#=GS A0A078DGD0/5-257   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A0D3D1A8/60-287  AC A0A0D3D1A8
#=GS A0A0D3D1A8/60-287  OS Brassica oleracea var. oleracea
#=GS A0A0D3D1A8/60-287  DE Uncharacterized protein
#=GS A0A0D3D1A8/60-287  DR GENE3D; 662ab936ec75c19791121cd499e4d1c1/60-287; 
#=GS A0A0D3D1A8/60-287  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS R0GQM4/66-279      AC R0GQM4
#=GS R0GQM4/66-279      OS Capsella rubella
#=GS R0GQM4/66-279      DE Uncharacterized protein
#=GS R0GQM4/66-279      DR GENE3D; 72a4d91165c5a827ab973185726a5198/66-279; 
#=GS R0GQM4/66-279      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS R0I9Q6/65-291      AC R0I9Q6
#=GS R0I9Q6/65-291      OS Capsella rubella
#=GS R0I9Q6/65-291      DE Uncharacterized protein
#=GS R0I9Q6/65-291      DR GENE3D; 748ef15031d7cdf97024476b9bee5efa/65-291; 
#=GS R0I9Q6/65-291      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS M4CHK9/64-290      AC M4CHK9
#=GS M4CHK9/64-290      OS Brassica rapa subsp. pekinensis
#=GS M4CHK9/64-290      DE Uncharacterized protein
#=GS M4CHK9/64-290      DR GENE3D; 8ec5121156740e3ef37f852efbba15af/64-290; 
#=GS M4CHK9/64-290      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A078JKC8/37-288  AC A0A078JKC8
#=GS A0A078JKC8/37-288  OS Brassica napus
#=GS A0A078JKC8/37-288  DE BnaCnng57130D protein
#=GS A0A078JKC8/37-288  DR GENE3D; 931bd74ccde866a1c2c63577ca913af8/37-288; 
#=GS A0A078JKC8/37-288  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS V4L4H7/58-282      AC V4L4H7
#=GS V4L4H7/58-282      OS Eutrema salsugineum
#=GS V4L4H7/58-282      DE Uncharacterized protein
#=GS V4L4H7/58-282      DR GENE3D; 9d9f3f0e0f52e55c277d5d7efa9f34ca/58-282; 
#=GS V4L4H7/58-282      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS D7KTZ3/33-291      AC D7KTZ3
#=GS D7KTZ3/33-291      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KTZ3/33-291      DE Putative uncharacterized protein
#=GS D7KTZ3/33-291      DR GENE3D; a5c89b5dcb6cb0b4322b229acb1c2796/33-291; 
#=GS D7KTZ3/33-291      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A078E6D9/63-184  AC A0A078E6D9
#=GS A0A078E6D9/63-184  OS Brassica napus
#=GS A0A078E6D9/63-184  DE BnaA08g21350D protein
#=GS A0A078E6D9/63-184  DR GENE3D; a9ba6b6ed2b2fe682c854a3334df4e03/63-184; 
#=GS A0A078E6D9/63-184  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS M4DGS4/59-284      AC M4DGS4
#=GS M4DGS4/59-284      OS Brassica rapa subsp. pekinensis
#=GS M4DGS4/59-284      DE Uncharacterized protein
#=GS M4DGS4/59-284      DR GENE3D; b60516b590c588cfe6d1fe4cdc9fdde9/59-284; 
#=GS M4DGS4/59-284      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS V4KCE8/37-296      AC V4KCE8
#=GS V4KCE8/37-296      OS Eutrema salsugineum
#=GS V4KCE8/37-296      DE Uncharacterized protein
#=GS V4KCE8/37-296      DR GENE3D; de6b7f73b308f58f42eafe947cf6ff8c/37-296; 
#=GS V4KCE8/37-296      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS E4MWH2/37-296      AC E4MWH2
#=GS E4MWH2/37-296      OS Eutrema halophilum
#=GS E4MWH2/37-296      DE mRNA, clone: RTFL01-14-K17
#=GS E4MWH2/37-296      DR GENE3D; de6b7f73b308f58f42eafe947cf6ff8c/37-296; 
#=GS E4MWH2/37-296      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema halophilum; 
#=GS A0A078BV52/64-290  AC A0A078BV52
#=GS A0A078BV52/64-290  OS Brassica napus
#=GS A0A078BV52/64-290  DE BnaA07g21070D protein
#=GS A0A078BV52/64-290  DR GENE3D; dee0369cceedad46e7a96b31232eab88/64-290; 
#=GS A0A078BV52/64-290  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A0D3CW82/63-288  AC A0A0D3CW82
#=GS A0A0D3CW82/63-288  OS Brassica oleracea var. oleracea
#=GS A0A0D3CW82/63-288  DE Uncharacterized protein
#=GS A0A0D3CW82/63-288  DR GENE3D; fb4bb32be4c289b53288a1d4a01c81bb/63-288; 
#=GS A0A0D3CW82/63-288  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GF TC 278.4 3.3E-88
#=GF SQ 20
O49286/34-291              --ELLMKILNLVDDRTVIIASCICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRAVKKGKFDE--
A0A178WNL6/34-291          --ELLMKILNLVDDRTVIIASCICSGWRDAVSLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRAVKKGKFDE--
V4KX76/66-287              ----------------------------------LTRLRLSWCKNNMNSLVLSLAPKFVKLQALILRQDKPQLEDNAVEAIANHCHELQELDLSKSLKLTDRSLYALAHGCPNLTKLNLSGCTSFSDTAIAYLIRFCRKLKVLNLCGCVQAVSDHALEAIGNNCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKP-GQWKSVKKE------
A0A078CT23/35-289          ----LMKILNLVDDRTVIIASGVCSGWRDAISFGLTRLSLSWCKKNLNSLVLSLAPKLVKLQTLVLRQDNPQLEDNAVEAIANHCHELQDLDLSKSLKLTDHSIYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVEAVSDNALQAIGENCNEMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALANKCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKN-EMWRSVKKGKFD---
A0A078DGP1/32-284          -----MRILNLVDDRTVIIASGVCSGWRDAISFGLTHLSLSWCKKDMNSLVLSLAPKLVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSLKLTDRSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVEAVSDNALQAIGENCSQMQSLNLGWCEKISDDGVMSLAYGCPDLRSLDLCGCVLITDESVVALANRCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKF----
A0A0D2ZTF9/36-288          -VELLLRILSLVDDRNVIAASGVCCGWRDAISLGLTRLRLSWCNNNMNSLVLSLAPKFVKLQTLILRQDKPQLEDNAVEAIANHCHELQELDLSKSLKLTDRSLDALAHGCPNLTKLNLSACTSFSDKAIAYLTTFCRNLKVLNLCGCVNAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGGQWKSS---------
A0A078DGD0/5-257           ---------NLVDDRTVIIASGVCSGWRDAISFGLTRLSLSWCKKDMNSLVLSLAPKLVKLQTLVLRQDKPQLEDNAVEAIANHCHELQALDLSKSLKLTDHSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVEAVSDSALQAIGENCSQMQSLNLGWCEKISDDGVMSLAYGCPDLRSLDLCGCVLITDESVVALANRCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKFDEEG
A0A0D3D1A8/60-287          ---------------------------------GLTRLSLSWCKKDMNSLVLSLAPKLVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSLKLTDHSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVEAVSDSALQAIGENCSQMQSLNLGWCEKISDDGVMSLAYGCPDLRSLDLCGCVLITDESVVALANRCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKFDEE-
R0GQM4/66-279              --------------------------------LGLTRLRLSWCNNNMNSLVLSLAPKFTKLQTLILRQDKPQLEDNAVEAIANHCRELQELDLSKSLKLTDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLRVLNLCGCVNAVSDNALEAIGNNCNQMQSLNLGWCENISDEGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLCSLGLYYCRNITDRAMYSLAQSGVKNK-----------------
R0I9Q6/65-291              ---------------------------------GLTRLSLSWCKKNLNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSLKLTDHSLYSLARGCTSLTKLNLSGCTSFSDTALAHLTRFCLKLKILNLCGCVEAVSDSALQAIGANCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVSITDESVVALANQCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRAVKKGKFDE--
M4CHK9/64-290              ---------------------------------GLTRLSLSWCKKNLNSLVLSLAPKLVKLQTLVLRQDNPQLEDNAVEAIANHCHELQDLDLSKSLKLTDHSLYSVARGCTNLTKLNLSGCTSFSDTALAYLTRFCKKLRVLNLCGCVEAVSDNALQAIGENCNEMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALANKCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKFDE--
A0A078JKC8/37-288          --ELLLRILSLVDDRNVIAASGVCCGWRDAISLGLTRLRLSWCNNNMNSLVLSLAPKFIKLQTLILRQDKPQLEDNAVEAIANHCHELQELDLSKSLRLTDRSLYALAHGCPNLTKLNLSACTSFSDKAIAYLTTFCRNLKVLNLCGCVNAVSDYTLEAIGNNCNQMQSLNLGWCEKISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGGQWKSS---------
V4L4H7/58-282              ----------------------------------LTRLRLSWCKNNMNSLVLSLAPKFVKLQALILRQDKPQLEDNAVEAIANHCHELQELDLSKSLKLTDRSLYALAHGCPNLTKLNLSGCTSFSDTAIAYLIRFCRKLKVLNLCGCVQAVSDHALEAIGNNCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKP-GQWKSVKKEKYD---
D7KTZ3/33-291              -VELLMRILNLVDDRTVIIASCICSGWRDAISLGLTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDSAVEAIANHCHELQDLDLSKSLKLTDHSLYSLARGCTNLTKLNLSACTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRTVKKGKFDE--
A0A078E6D9/63-184          ----------------------------DAISLGLTRLRLSWCNNNMNSLVLSLAPKFVKLQTLILRQDKPQLEDNAVEAIANHCHELQELDLSKSLKLTDRSLYALAHGCPNLTKLNLSGCTSFSDKAIAYLTRSCRNLKVLNLCGCVN-----------------------------------------------------------------------------------------------------------------
M4DGS4/59-284              ---------------------------------GLTHLSLSWCKKDMNSLVLSLAPKLVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSLKLTDRSLYSLARGCNNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVEAVSDNALQAIGENCSQMQSLNLGWCEKISDDGVMSLAYGCPDLRSLDLCGCVLITDESVVALANRCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKFD---
V4KCE8/37-296              PLELLMRILNLVDDRTVIIASGVCSGWRDAISFGLTRLSLSWCKKNMNGLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCPELQDLDLSKSLKLTDCSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKILNLCGCVEAVSDNALQAIGENCNQMQSLNLGWCENISDDGVMNLAYGCPDLRSLDLCGCVLITDESVVALANRCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKFDE--
E4MWH2/37-296              PLELLMRILNLVDDRTVIIASGVCSGWRDAISFGLTRLSLSWCKKNMNGLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCPELQDLDLSKSLKLTDCSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKILNLCGCVEAVSDNALQAIGENCNQMQSLNLGWCENISDDGVMNLAYGCPDLRSLDLCGCVLITDESVVALANRCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKFDE--
A0A078BV52/64-290          ---------------------------------GLTRLSLSWCKKNLNSLVLSLAPKLVKLQTLVLRQDNPQLEDNAVQAIADHCHELQDLDLSKSLKLTDHSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCKKLRVLNLCGCVEAVSDNALQAIGENCNEMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALANKCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKFDE--
A0A0D3CW82/63-288          --------------------------------FGLTRLSLSWCKKNLNSLVLSLAPKLVKLQTLVLRQDNPQLEDNAVEAIANHCHELQDLDLSKSLKLTDHSLYSLARGCTNLTKLNLSGCTSFSDTALAYLTRFCRKLKVLNLCGCVEAVSDNALQAIGENCNEMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALANKCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKH-EMWRSVKKGKF----
#=GC scorecons             00001111111111111111111111113323379989599996677989999999967999897999979999989989998997999699999978899598868969958999999979999996969798769769879999999566663464666466555666666666466666665666666666466665665666666666643656656666666666666666666666666630435444443332100
#=GC scorecons_70          _________________________________*****_*****_********************************************************_***_*****_***************_*********************_****__*_***_**___*********_***_***_*********_****_**_**********__*_**_**************************_________________
#=GC scorecons_80          _________________________________*****_****__************_******_************************_***********_***_**_**_***************_*_*****_**_**********__________________________________________________________________________________________________________________
#=GC scorecons_90          __________________________________****_****____**********__*****_****_***************_***_******_****_***_**_**__*******_******_*_*_*___*__*__*******__________________________________________________________________________________________________________________
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