# STOCKHOLM 1.0
#=GF ID 3.40.50.410/FF/19483
#=GF DE Collagen alpha-1(XXVIII) chain
#=GF AC 3.40.50.410/FF/19483
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 34.390
#=GS Q2UY09/39-237      AC Q2UY09
#=GS Q2UY09/39-237      OS Homo sapiens
#=GS Q2UY09/39-237      DE Collagen alpha-1(XXVIII) chain
#=GS Q2UY09/39-237      DR GENE3D; 53ac83d772acac4e0c2346b4a9aff77b/39-237; 
#=GS Q2UY09/39-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q2UY09/39-237      DR GO; GO:0005576; GO:0005788; 
#=GS Q2UY11/38-236      AC Q2UY11
#=GS Q2UY11/38-236      OS Mus musculus
#=GS Q2UY11/38-236      DE Collagen alpha-1(XXVIII) chain
#=GS Q2UY11/38-236      DR GENE3D; aeb47e9a378d668845d4cabc18ede9ff/38-236; 
#=GS Q2UY11/38-236      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q2UY11/38-236      DR GO; GO:0005604; 
#=GS A0A1L1SSY2/37-229  AC A0A1L1SSY2
#=GS A0A1L1SSY2/37-229  OS Mus musculus
#=GS A0A1L1SSY2/37-229  DE Collagen alpha-1(XXVIII) chain
#=GS A0A1L1SSY2/37-229  DR GENE3D; 0dd3a80bb6a3954caf6840a693c0c275/37-229; 
#=GS A0A1L1SSY2/37-229  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS F6UXW3/37-239      AC F6UXW3
#=GS F6UXW3/37-239      OS Callithrix jacchus
#=GS F6UXW3/37-239      DE Uncharacterized protein
#=GS F6UXW3/37-239      DR GENE3D; 296fbeabc9c611027a96519ee4acda18/37-239; 
#=GS F6UXW3/37-239      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS H2PMU8/39-238      AC H2PMU8
#=GS H2PMU8/39-238      OS Pongo abelii
#=GS H2PMU8/39-238      DE Uncharacterized protein
#=GS H2PMU8/39-238      DR GENE3D; 4e8c1a8901a7b05832d01f9a7d6e615f/39-238; 
#=GS H2PMU8/39-238      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS A0A1D5R744/38-236  AC A0A1D5R744
#=GS A0A1D5R744/38-236  OS Macaca mulatta
#=GS A0A1D5R744/38-236  DE Uncharacterized protein
#=GS A0A1D5R744/38-236  DR GENE3D; 662d5699ae8dd0e509aa90c4ac03a574/38-236; 
#=GS A0A1D5R744/38-236  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS G7P1A8/38-233      AC G7P1A8
#=GS G7P1A8/38-233      OS Macaca fascicularis
#=GS G7P1A8/38-233      DE Putative uncharacterized protein
#=GS G7P1A8/38-233      DR GENE3D; 67c7a21f4e7a426ead580407bebd78b2/38-233; 
#=GS G7P1A8/38-233      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS A0A1D5RKZ3/38-235  AC A0A1D5RKZ3
#=GS A0A1D5RKZ3/38-235  OS Macaca mulatta
#=GS A0A1D5RKZ3/38-235  DE Uncharacterized protein
#=GS A0A1D5RKZ3/38-235  DR GENE3D; 6fbecc837c06a6397cdd2edfe6535407/38-235; 
#=GS A0A1D5RKZ3/38-235  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS D3ZN64/39-238      AC D3ZN64
#=GS D3ZN64/39-238      OS Rattus norvegicus
#=GS D3ZN64/39-238      DE Collagen type XXVIII alpha 1 chain
#=GS D3ZN64/39-238      DR GENE3D; 7a887a1daaf3b6fd24aa93d46e880f16/39-238; 
#=GS D3ZN64/39-238      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS G3R417/40-237      AC G3R417
#=GS G3R417/40-237      OS Gorilla gorilla gorilla
#=GS G3R417/40-237      DE Uncharacterized protein
#=GS G3R417/40-237      DR GENE3D; 88483fa1d8785c8941ae8296dfabdcb9/40-237; 
#=GS G3R417/40-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS H2RBZ7/39-237      AC H2RBZ7
#=GS H2RBZ7/39-237      OS Pan troglodytes
#=GS H2RBZ7/39-237      DE Uncharacterized protein
#=GS H2RBZ7/39-237      DR GENE3D; 9555a3aa0fceb49e3abaf60a196f3b77/39-237; 
#=GS H2RBZ7/39-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS G1S216/38-237      AC G1S216
#=GS G1S216/38-237      OS Nomascus leucogenys
#=GS G1S216/38-237      DE Uncharacterized protein
#=GS G1S216/38-237      DR GENE3D; b450630f4c34fc0981cf4da13d9237bd/38-237; 
#=GS G1S216/38-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS A0A096MS68/38-236  AC A0A096MS68
#=GS A0A096MS68/38-236  OS Papio anubis
#=GS A0A096MS68/38-236  DE Uncharacterized protein
#=GS A0A096MS68/38-236  DR GENE3D; d46d64bd5d5b8e6aaaf5aa7c8e90dea3/38-236; 
#=GS A0A096MS68/38-236  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS A0A0D9RKT8/39-237  AC A0A0D9RKT8
#=GS A0A0D9RKT8/39-237  OS Chlorocebus sabaeus
#=GS A0A0D9RKT8/39-237  DE Uncharacterized protein
#=GS A0A0D9RKT8/39-237  DR GENE3D; d59d777d9eeedf36e98b23bed5045579/39-237; 
#=GS A0A0D9RKT8/39-237  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS A0A061IRF5/3-195   AC A0A061IRF5
#=GS A0A061IRF5/3-195   OS Cricetulus griseus
#=GS A0A061IRF5/3-195   DE Collagen alpha-1(XXVIII) chain
#=GS A0A061IRF5/3-195   DR GENE3D; 9e8f26557fc5ffe94a6673390e189863/3-195; 
#=GS A0A061IRF5/3-195   DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; 
#=GS G3HJI1/24-219      AC G3HJI1
#=GS G3HJI1/24-219      OS Cricetulus griseus
#=GS G3HJI1/24-219      DE Collagen alpha-1(XXVIII) chain
#=GS G3HJI1/24-219      DR GENE3D; 95715b7849cb42c46640f80a2ab575be/24-219; 
#=GS G3HJI1/24-219      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Cricetinae; Cricetulus; Cricetulus griseus; 
#=GF TC 408.2 3.8E-126
#=GF SQ 16
Q2UY09/39-237              --DVQGSICFIDIVFIVDSSESSKIALFDKQKDFVDSLSDKIFQLTPGRSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVVLLMTDGIDHPKNPDVQSISEDARISGISFITIALSTVVNEAKLRLISGDSSSEPTLLLSDPTLVDKIQDRLDI----LFEKKCER------
Q2UY11/38-236              -NDFQDAICFIDVVFILDSSESSKIVLFDNQKDFVDSLSEKIFQLTPGRSLKYDIKLAALQFSSSVQIDPPLSSWKDLRTFKQRVKSLNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKSPDVQSISEDARILGISFITVGLSTVVNEAKLRLISGDPSNEPVLLLSDPTLVDRIQERLGV----LFERKCE-------
A0A1L1SSY2/37-229          KNDFQDAICFIDVVFILDSSESSKIVLFDNQKDFVDSLSEKIFQLTPGRSLKYDIKLAALQFSSSVQIDPPLSSWKDLRTFKQRVKSLNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKSPDVQSISEDARILGISFITVGLSTVVNEAKLRLISGDPSNEPVLLLSDPTLVDRIQERLGV------------------
F6UXW3/37-239              KSDVQDSICFIDIVFIVDSSESSKIVLFDKQKDFVDGLSDKIFRLTPRRSVEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATKLLKREGRKGSVKVALLMTDGIDHPKNPDVQSISDDARISGISFITIGLSTVVNEAKLRLISGDSSNEPILLLSDPTLVDKIQDHLET----LFEKKCERKI----
H2PMU8/39-238              --DVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGRSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPRNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPTLLLSDPTLVDKIQDRLDN----LFEKKCERK-----
A0A1D5R744/38-236          --DVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGGSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPPLLLSDPTLADKIQDRLDI----LFEKKCER------
G7P1A8/38-233              --DVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGGSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPPLLLSDPTLADKIQDRLHISL--LIQ-----------
A0A1D5RKZ3/38-235          --DVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGGSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPPLLLSDPTLADKIQDRL-----------CERKICECE
D3ZN64/39-238              --DFQDAICFIDVVFILDSSESSKIVLFDNQKDFVDSLSEKLFQLTPGHSLRYDIKLAALQFSSSVQIDPPFSSWKDLRTFKQRVKSLNLIGQGTFSYYAISNATRLLKKEGRKDGVKVALLMTDGIDHPKSPDVQSISEDARISGISFITVGLSTVVNEAKLRLISGDSSNEPVLLLSDPTLVDKIRGRLDV----LFERKCEHK-----
G3R417/40-237              ---VQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGRSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPTLLLSDPTLVDKIQDRLDI----LFEKKCER------
H2RBZ7/39-237              --DVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGRSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVVLLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPTLLLSDPTLVDKIQDRLDI----LFEKKCER------
G1S216/38-237              -SDVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGRSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPTLLLSDPTLVDKIQDRLDI----LFEKKCER------
A0A096MS68/38-236          --DVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGGSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPPLLLSDPTLADKIQDRLDI----LFEKKCER------
A0A0D9RKT8/39-237          --DVQGSICFIDIVFIVDSSESSKIVLFDKQKDFVDSLSDKIFQLTPGRSLEYDIKLAALQFSSSVQIDPPFSSWKDLQTFKQKVKSMNLIGQGTFSYYAISNATRLLNREGRKDGVKVALLMTDGIDHPKNPDVQSISEDARISGISFITIGLSTVVNEAKLRLISGDSSSEPPLLLSDPTLVDKIQDRLDI----LFEKKCEH------
A0A061IRF5/3-195           --------CFIDVAFILDSSESSKIVLFDNQKDFVDSLSERIFQLTPGRSLKYDIRLAALQFSSSVQIDPPFSSWKDLPTFKQRVTSLNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKSPDVQSISEDARISGISFITVGLSTVVNEAKLRLISGDSSNEPVLLLSDPTLVDKIQERLDV----LFESKCEH------
G3HJI1/24-219              ---IRDAICFIDVAFILDSSESSKIVLFDNQKDFVDSLSERIFQLTPGRSLKYDIRLAALQFSSSVQIDPPFSSWKDLPTFKQRVTSLNLIGQGTFSYYAISNATRLLKREGRKDGVKVALLMTDGIDHPKSPDVQSISEDARISGISFITVGLSTVVNEAKLRLISGDSSNEPVLLLSDPTLVDKIQERLKEEIIKLI------------
#=GC scorecons             0055655799997799699999999899969999998997789899986985999799999999999999979999995999979696999999999999999998998899998899989999999999869999999899996999999789999999999999999796994999999996979868944000064423442000000
#=GC scorecons_70          ____*__**********************_******************_**_**************************_****************************************************_***************************************_**_****************____________________
#=GC scorecons_80          _______*****_***_************_*********_********_**_**************************_****_*_*_*******************************************_************_******_*******************_**_********_****_**____________________
#=GC scorecons_90          ________****__**_************_*********__*******_**_***_***************_******_****_*_*_*******************************_***********_************_******_*****************_*_**_********_*_**_**____________________
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