# STOCKHOLM 1.0
#=GF ID 3.40.50.2300/FF/152054
#=GF DE Two-component response regulator (YbdK)
#=GF AC 3.40.50.2300/FF/152054
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 89.446
#=GS O31432/1-124      AC O31432
#=GS O31432/1-124      OS Bacillus subtilis subsp. subtilis str. 168
#=GS O31432/1-124      DE Uncharacterized transcriptional regulatory protein YbdJ
#=GS O31432/1-124      DR GENE3D; c105c3c94035c5bcaf706fa0b9bd75cd/1-124; 
#=GS O31432/1-124      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A0J6F238/1-124  AC A0A0J6F238
#=GS A0A0J6F238/1-124  OS Bacillus glycinifermentans
#=GS A0A0J6F238/1-124  DE Two-component system response regulator
#=GS A0A0J6F238/1-124  DR GENE3D; 2bed064351af349d6e05812336b0cb70/1-124; 
#=GS A0A0J6F238/1-124  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus glycinifermentans; 
#=GS F9RHU8/1-127      AC F9RHU8
#=GS F9RHU8/1-127      OS Vibrio sp. N418
#=GS F9RHU8/1-127      DE Response regulator
#=GS F9RHU8/1-127      DR GENE3D; 2e6efcbd41e8a0dc8acb5a226ba141da/1-127; 
#=GS F9RHU8/1-127      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio sp. N418; 
#=GS A0A1C7FJ38/1-141  AC A0A1C7FJ38
#=GS A0A1C7FJ38/1-141  OS Vibrio scophthalmi
#=GS A0A1C7FJ38/1-141  DE Protein EIN4
#=GS A0A1C7FJ38/1-141  DR GENE3D; 61bea478db34bbc72052e1204663fb44/1-141; 
#=GS A0A1C7FJ38/1-141  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio scophthalmi; 
#=GS F9RZ25/1-124      AC F9RZ25
#=GS F9RZ25/1-124      OS Vibrio ichthyoenteri ATCC 700023
#=GS F9RZ25/1-124      DE Response regulator
#=GS F9RZ25/1-124      DR GENE3D; 635a4a5b645e6015b0c7aa4bb278c12e/1-124; 
#=GS F9RZ25/1-124      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio ichthyoenteri; 
#=GS P45365/133-269    AC P45365
#=GS P45365/133-269    OS Thiocystis violacea
#=GS P45365/133-269    DE Uncharacterized 76.5 kDa protein in phbC 3'region
#=GS P45365/133-269    DR GENE3D; 6912d2ec882abf6de9b7d5ae9ca540d1/133-269; 
#=GS P45365/133-269    DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis; Thiocystis violacea; 
#=GS E8M3H9/1-127      AC E8M3H9
#=GS E8M3H9/1-127      OS Vibrio sinaloensis DSM 21326
#=GS E8M3H9/1-127      DE Response regulator
#=GS E8M3H9/1-127      DR GENE3D; 7f0a0c1b5e91080f45dab7f51aeb8908/1-127; 
#=GS E8M3H9/1-127      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio oreintalis group; Vibrio sinaloensis; 
#=GS A0A0C2NP73/1-140  AC A0A0C2NP73
#=GS A0A0C2NP73/1-140  OS Vibrio renipiscarius
#=GS A0A0C2NP73/1-140  DE Chemotaxis protein CheY
#=GS A0A0C2NP73/1-140  DR GENE3D; a954183c41140ab3b02781d699ee73fa/1-140; 
#=GS A0A0C2NP73/1-140  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio renipiscarius; 
#=GS A0A1D8FGI4/1-124  AC A0A1D8FGI4
#=GS A0A1D8FGI4/1-124  OS Bacillus subtilis subsp. subtilis
#=GS A0A1D8FGI4/1-124  DE Two-component system response regulator
#=GS A0A1D8FGI4/1-124  DR GENE3D; c105c3c94035c5bcaf706fa0b9bd75cd/1-124; 
#=GS A0A1D8FGI4/1-124  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS G4F0K3/1-124      AC G4F0K3
#=GS G4F0K3/1-124      OS Bacillus subtilis subsp. subtilis str. SC-8
#=GS G4F0K3/1-124      DE Uncharacterized protein
#=GS G4F0K3/1-124      DR GENE3D; c105c3c94035c5bcaf706fa0b9bd75cd/1-124; 
#=GS G4F0K3/1-124      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS L8ABV4/1-124      AC L8ABV4
#=GS L8ABV4/1-124      OS Bacillus subtilis BEST7613
#=GS L8ABV4/1-124      DE Two-component response regulator YbdK
#=GS L8ABV4/1-124      DR GENE3D; c105c3c94035c5bcaf706fa0b9bd75cd/1-124; 
#=GS L8ABV4/1-124      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A164W700/1-124  AC A0A164W700
#=GS A0A164W700/1-124  OS Bacillus subtilis
#=GS A0A164W700/1-124  DE Two-component response regulator ybdJ
#=GS A0A164W700/1-124  DR GENE3D; c105c3c94035c5bcaf706fa0b9bd75cd/1-124; 
#=GS A0A164W700/1-124  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A1E3WI19/1-127  AC A0A1E3WI19
#=GS A0A1E3WI19/1-127  OS Vibrio scophthalmi
#=GS A0A1E3WI19/1-127  DE Protein EIN4
#=GS A0A1E3WI19/1-127  DR GENE3D; c17ab4a220101d75d488fda7b59aa962/1-127; 
#=GS A0A1E3WI19/1-127  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio scophthalmi; 
#=GS U4KFX8/1-144      AC U4KFX8
#=GS U4KFX8/1-144      OS Vibrio nigripulchritudo
#=GS U4KFX8/1-144      DE Putative Serine phosphatase RsbU, regulator of sigma subunit fused with Signal receiver domain
#=GS U4KFX8/1-144      DR GENE3D; ce1f455df6adc3d8febf74984f9e87bf/1-144; 
#=GS U4KFX8/1-144      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio nigripulchritudo; 
#=GF TC 154.8 3.5E-49
#=GF SQ 14
O31432/1-124              MK--GYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQKV----DLVIMDVMLPGEDGYQMSAKIKKL--GLGIPVIFLSARNDMDSKLQGLQIGED-YMVKPFDPRELLLRMRNMLEHHYGTFT---------------------
A0A0J6F238/1-124          MK--GYHILIVEDDVMIGKLLKKILQREGYDVSWKTDGEDVLSIIQKA----DLVIMDVMLPGEDGYQMSKKIKDL--GLNIPIIFLSARNDMDSKLQGLRIGED-YMVKPFDPRELLLRMKNMLEHHYGTFT---------------------
F9RHU8/1-127              M-----RIMIVDDHATNRELCRLMLSHITSRIDTFESGVGVVESMREMSLLPDVILLDVMMPEKDGFTTAQEIRQAFPDHHIAIIFLTVLDDHDSFERCLALGDD-FVLKPVERSVLLAKVQ----AHFRIVRMHNE-----------------
A0A1C7FJ38/1-141          M-----RIMIIDDHATNRELCRLMLSHITSRIDTFESGVGVVESMREMSLLPDVILLDVMMPEKDGFTTAQEIREAFPDHHIAIIFLTVLDDHDSFERCLALGDD-FVLKPVERSVLLAKVQ----AHFRIVRMHNEVISQRDELSQFHEQ---
F9RZ25/1-124              --------MIVDDHATNRELCRLMLSHITSRIDTFESGVGVVDAMRSMTLLPDVILLDVMMPEKDGFTAAQEIREAFPNHHIAIIFLTVLDDHDSFERCLALGDD-FVLKPVERSVLLAKVQ----AHFRIVRMHNE-----------------
P45365/133-269            VETVRYRILILEQDASHAKKIASLLATIGMETLVVDDPMKILARMQAFR--PNLVLMDLYLPGATGSELTTIIRDHDDFYGIPILFLSQEADLDKQLAALKAGGDGFIKKPVSREALIAAVE----YRMRMSRWLQD----RRTLVN-------
E8M3H9/1-127              M-----HIMIVDDHATNRELCRFMLSHLAEKVTTFENGQGVVSAMENMDRLPDIILLDVMMPIKDGFTTAKEIREAFPKVHIPILFLTVLDDHASFERCLKYGDD-FILKPVERSVLLGKVQ----AHYRIVRMHNE-----------------
A0A0C2NP73/1-140          M-----RIMIIDDHASNRELCRLMLSHISSRIDTFDSGVGVVEFMQNMPLLPDVILLDVVMPDKNGFSTAQEIREAFPDHHIAIIFLTVLDDHDSFERCLALGDD-FVLKPVERSVLLAKVQ----AHFRIVKMHNEVISQRDELTRFHE----
A0A1D8FGI4/1-124          MK--GYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQKV----DLVIMDVMLPGEDGYQMSAKIKKL--GLGIPVIFLSARNDMDSKLQGLQIGED-YMVKPFDPRELLLRMRNMLEHHYGTFT---------------------
G4F0K3/1-124              MK--GYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQKV----DLVIMDVMLPGEDGYQMSAKIKKL--GLGIPVIFLSARNDMDSKLQGLQIGED-YMVKPFDPRELLLRMRNMLEHHYGTFT---------------------
L8ABV4/1-124              MK--GYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQKV----DLVIMDVMLPGEDGYQMSAKIKKL--GLGIPVIFLSARNDMDSKLQGLQIGED-YMVKPFDPRELLLRMRNMLEHHYGTFT---------------------
A0A164W700/1-124          MK--GYRILIVEDDVMIGDLLQKILQREGYRVIWKTDGADVLSVIQKV----DLVIMDVMLPGEDGYQMSAKIKKL--GLGIPVIFLSARNDMDSKLQGLQIGED-YMVKPFDPRELLLRMRNMLEHHYGTFT---------------------
A0A1E3WI19/1-127          M-----RIMIVDDHATNRELCRLMLSHITSRIDTFESGVGVVESMREMSLLPDVILLDVMMPEKDGFTTAQEIRQAFPDHHIAIIFLTVLDDHDSFERCLALGDD-FVLKPVERSVLLAKVQ----AHFRIVRMHNE-----------------
U4KFX8/1-144              M-----RILIVDDQKTNREMFRYMLTSIAEDITLFENGEGVVDALKEAEALPDVILMDVMMPVKDGFTTAKEIRAEFPNVHMPIIFLTVLDDRDSFGRCLFYGDD-FILKPVGRSTLLAKVQ----AHYRIAKMHNEVSKQRDELSKFREQVKY
#=GC scorecons            6100126769777554455645369454535633355745864365441123867669866945796445459744223448677996545948734549349690755995554498566511114865545222200000000000000000
#=GC scorecons_70         *_____*******______*___**____________*__**__*_______*_********__***_____**_______******____*_**____*__***_*__**_____**__*______**_________________________
#=GC scorecons_80         _______*_*__*___________*____________*__*___________*____**__*___*______*________*_****____*_**____*__*_*_*__**_____**_________*__________________________
#=GC scorecons_90         _________*______________*_______________*________________*___*___*______*________*___**____*_______*__*_*____**_____*_____________________________________
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