# STOCKHOLM 1.0
#=GF ID 3.40.50.2300/FF/151823
#=GF DE Virulence sensor protein BvgS
#=GF AC 3.40.50.2300/FF/151823
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 20.982
#=GS P16575/962-1100      AC P16575
#=GS P16575/962-1100      OS Bordetella pertussis Tohama I
#=GS P16575/962-1100      DE Virulence sensor protein BvgS
#=GS P16575/962-1100      DR GENE3D; 09c77612881e0040d13af8ccdae79867/962-1100; 
#=GS P16575/962-1100      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS P16575/962-1100      DR EC; 2.7.13.3; 
#=GS A0A0C6P0E1/961-1100  AC A0A0C6P0E1
#=GS A0A0C6P0E1/961-1100  OS Bordetella bronchiseptica 253
#=GS A0A0C6P0E1/961-1100  DE Histidine kinase
#=GS A0A0C6P0E1/961-1100  DR GENE3D; 04251d7cda161770e89d6f9e045277f3/961-1100; 
#=GS A0A0C6P0E1/961-1100  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella bronchiseptica; 
#=GS A0A0C6P0E1/961-1100  DR EC; 2.7.13.3; 
#=GS P26762/961-1100      AC P26762
#=GS P26762/961-1100      OS Bordetella bronchiseptica RB50
#=GS P26762/961-1100      DE Virulence sensor protein BvgS
#=GS P26762/961-1100      DR GENE3D; 04f91eabb00bacc684746e72ae16085d/961-1100; 
#=GS P26762/961-1100      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella bronchiseptica; 
#=GS P26762/961-1100      DR EC; 2.7.13.3; 
#=GS A0A131HSS5/962-1100  AC A0A131HSS5
#=GS A0A131HSS5/962-1100  OS Bordetella pertussis
#=GS A0A131HSS5/962-1100  DE Histidine kinase
#=GS A0A131HSS5/962-1100  DR GENE3D; 09c77612881e0040d13af8ccdae79867/962-1100; 
#=GS A0A131HSS5/962-1100  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A131HSS5/962-1100  DR EC; 2.7.13.3; 
#=GS A0A058YBB1/961-1102  AC A0A058YBB1
#=GS A0A058YBB1/961-1102  OS Bordetella bronchiseptica 99-R-0433
#=GS A0A058YBB1/961-1102  DE Histidine kinase
#=GS A0A058YBB1/961-1102  DR GENE3D; 168b36d8c432fbdbc085a553ef890d94/961-1102; 
#=GS A0A058YBB1/961-1102  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella bronchiseptica; 
#=GS A0A058YBB1/961-1102  DR EC; 2.7.13.3; 
#=GS P40330/961-1100      AC P40330
#=GS P40330/961-1100      OS Bordetella parapertussis 12822
#=GS P40330/961-1100      DE Virulence sensor protein BvgS
#=GS P40330/961-1100      DR GENE3D; 19195a843a638f406c494e14a40de15b/961-1100; 
#=GS P40330/961-1100      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella parapertussis; 
#=GS P40330/961-1100      DR EC; 2.7.13.3; 
#=GS A0A0E7UFC3/962-1100  AC A0A0E7UFC3
#=GS A0A0E7UFC3/962-1100  OS Bordetella pertussis
#=GS A0A0E7UFC3/962-1100  DE Histidine kinase
#=GS A0A0E7UFC3/962-1100  DR GENE3D; 34362ed62da919eccebb9176e6340d2a/962-1100; 
#=GS A0A0E7UFC3/962-1100  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0E7UFC3/962-1100  DR EC; 2.7.13.3; 
#=GS A0A0A0XHJ9/962-1100  AC A0A0A0XHJ9
#=GS A0A0A0XHJ9/962-1100  OS Bordetella pertussis B1920
#=GS A0A0A0XHJ9/962-1100  DE Histidine kinase
#=GS A0A0A0XHJ9/962-1100  DR GENE3D; 34362ed62da919eccebb9176e6340d2a/962-1100; 
#=GS A0A0A0XHJ9/962-1100  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0A0XHJ9/962-1100  DR EC; 2.7.13.3; 
#=GS A0A0T7R5K2/703-843   AC A0A0T7R5K2
#=GS A0A0T7R5K2/703-843   OS Bordetella pertussis
#=GS A0A0T7R5K2/703-843   DE Histidine kinase
#=GS A0A0T7R5K2/703-843   DR GENE3D; 7ebae0e00db631a4e1c7b8b8c19eeabf/703-843; 
#=GS A0A0T7R5K2/703-843   DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0T7R5K2/703-843   DR EC; 2.7.13.3; 
#=GS A0A0T7CP21/962-1100  AC A0A0T7CP21
#=GS A0A0T7CP21/962-1100  OS Bordetella pertussis 18323
#=GS A0A0T7CP21/962-1100  DE Histidine kinase
#=GS A0A0T7CP21/962-1100  DR GENE3D; 897369aeb95ae33a508d822490d8706e/962-1100; 
#=GS A0A0T7CP21/962-1100  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0T7CP21/962-1100  DR EC; 2.7.13.3; 
#=GS K0MJS2/961-1100      AC K0MJS2
#=GS K0MJS2/961-1100      OS Bordetella parapertussis Bpp5
#=GS K0MJS2/961-1100      DE Histidine kinase
#=GS K0MJS2/961-1100      DR GENE3D; 8bc29fb28f726710fc1601b59ef13ede/961-1100; 
#=GS K0MJS2/961-1100      DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella parapertussis; 
#=GS K0MJS2/961-1100      DR EC; 2.7.13.3; 
#=GS A0A063USW0/939-1077  AC A0A063USW0
#=GS A0A063USW0/939-1077  OS Bordetella bronchiseptica OSU553
#=GS A0A063USW0/939-1077  DE Histidine kinase
#=GS A0A063USW0/939-1077  DR GENE3D; 9e3095416bd1f6ba0f9c80734538b42d/939-1077; 
#=GS A0A063USW0/939-1077  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella bronchiseptica; 
#=GS A0A063USW0/939-1077  DR EC; 2.7.13.3; 
#=GS A0A1M9K4I0/961-1100  AC A0A1M9K4I0
#=GS A0A1M9K4I0/961-1100  OS Mycobacterium abscessus subsp. abscessus
#=GS A0A1M9K4I0/961-1100  DE His Kinase A (Phosphoacceptor) domain protein
#=GS A0A1M9K4I0/961-1100  DR GENE3D; b694475c19ba8cb35182889c7b287306/961-1100; 
#=GS A0A1M9K4I0/961-1100  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium chelonae group; Mycobacterium abscessus subgroup; Mycobacterium abscessus; Mycobacterium abscessus subsp. abscessus; 
#=GS A0A1M9K4I0/961-1100  DR EC; 2.7.13.3; 
#=GS A0A0T7MDQ3/236-374   AC A0A0T7MDQ3
#=GS A0A0T7MDQ3/236-374   OS Bordetella pertussis
#=GS A0A0T7MDQ3/236-374   DE Virulence sensor protein
#=GS A0A0T7MDQ3/236-374   DR GENE3D; c325b7b48090ab534a4cac3940a7b1b7/236-374; 
#=GS A0A0T7MDQ3/236-374   DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0T7MDQ3/236-374   DR EC; 2.7.13.3; 
#=GS A0A0N2ILN3/939-1077  AC A0A0N2ILN3
#=GS A0A0N2ILN3/939-1077  OS Bordetella pertussis H921
#=GS A0A0N2ILN3/939-1077  DE Histidine kinase
#=GS A0A0N2ILN3/939-1077  DR GENE3D; ff5144323ae7de7df75c47e3b08aa24d/939-1077; 
#=GS A0A0N2ILN3/939-1077  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS A0A0N2ILN3/939-1077  DR EC; 2.7.13.3; 
#=GS A0A171JUL6/143-281   AC A0A171JUL6
#=GS A0A171JUL6/143-281   OS Bordetella pertussis 2356847
#=GS A0A171JUL6/143-281   DE Response regulator receiver domain protein
#=GS A0A171JUL6/143-281   DR GENE3D; a6ce30bdc5aa7d2b670f606da7f1b8a2/143-281; 
#=GS A0A171JUL6/143-281   DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GF TC 297.1 9.0E-93
#=GF SQ 16
P16575/962-1100              -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
A0A0C6P0E1/961-1100          AAQATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVIT--DCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAAARA--AL
P26762/961-1100              AAQATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVIT--DCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAAARA--AL
A0A131HSS5/962-1100          -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
A0A058YBB1/961-1102          AEQAAPQQPRASLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWHEHAFEVVIT--DCNMPGMSGYELARRIRAAEAAPGYARAPCVLFGFTASAQMDEAQRCRAAGMDECLFKPIGVDTLSQHLSEAAARTQPPL
P40330/961-1100              AAQATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVIT--DCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAAARA--AL
A0A0E7UFC3/962-1100          -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
A0A0A0XHJ9/962-1100          -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
A0A0T7R5K2/703-843           -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVITXXXCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
A0A0T7CP21/962-1100          -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
K0MJS2/961-1100              AAQATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVIT--DCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEVQRCRAAGMDDCLFKPIGVDALRQRLNEAAARA--AL
A0A063USW0/939-1077          -AAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAAARA--AL
A0A1M9K4I0/961-1100          AAQATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVVAADSGEAALALWHEHAFDVVIT--DCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAAARA--AL
A0A0T7MDQ3/236-374           -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
A0A0N2ILN3/939-1077          -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
A0A171JUL6/143-281           -TAATPSKPQVSLRVLVVDDHKPNLMLLRQQLDYLGQRVIAADSGEAALALWREHAFDVVIT--DCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDDCLFKPIGVDALRQRLNEAVARA--AL
#=GC scorecons               245979679769999999999999999999999999999799999999999969999799990079999976999999999999999996976979999999999998999999999799999999979697969969970069
#=GC scorecons_70            ___***********************************************************__************************************************************************_***__**
#=GC scorecons_80            ___*_*__*__*****************************************_*********__*******_*****************_*__**********************************_*_*_*_**_**____*
#=GC scorecons_90            ___*_*__*__****************************_************_****_****___*****__*****************_*__*_**********************_*********_*_*_*_**_**____*
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