# STOCKHOLM 1.0 #=GF ID 3.40.50.2300/FF/151290 #=GF DE HTH-type transcriptional regulator RegA #=GF AC 3.40.50.2300/FF/151290 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 38.200 #=GS A0A1C8FPZ5/63-160_292-310 AC A0A1C8FPZ5 #=GS A0A1C8FPZ5/63-160_292-310 OS Clostridium sp. MF28 #=GS A0A1C8FPZ5/63-160_292-310 DE Catabolite control protein A #=GS A0A1C8FPZ5/63-160_292-310 DR GENE3D; e185ffdd8f4af9f7b08433451742505b/63-160_292-310; #=GS A0A1C8FPZ5/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. MF28; #=GS A0A1C8FPZ5/63-160_292-310 DR EC; 5.1.1.1; #=GS A6LPF7/63-160_292-310 AC A6LPF7 #=GS A6LPF7/63-160_292-310 OS Clostridium beijerinckii NCIMB 8052 #=GS A6LPF7/63-160_292-310 DE Alanine racemase #=GS A6LPF7/63-160_292-310 DR GENE3D; e185ffdd8f4af9f7b08433451742505b/63-160_292-310; #=GS A6LPF7/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium beijerinckii; #=GS A6LPF7/63-160_292-310 DR EC; 5.1.1.1; #=GS A0A0B5QEQ2/63-160_292-310 AC A0A0B5QEQ2 #=GS A0A0B5QEQ2/63-160_292-310 OS Clostridium beijerinckii #=GS A0A0B5QEQ2/63-160_292-310 DE Catabolite control protein A #=GS A0A0B5QEQ2/63-160_292-310 DR GENE3D; e185ffdd8f4af9f7b08433451742505b/63-160_292-310; #=GS A0A0B5QEQ2/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium beijerinckii; #=GS A0A0B5QEQ2/63-160_292-310 DR EC; 5.1.1.1; #=GS A0A0K2ML67/63-160_292-310 AC A0A0K2ML67 #=GS A0A0K2ML67/63-160_292-310 OS Clostridium beijerinckii NRRL B-598 #=GS A0A0K2ML67/63-160_292-310 DE Catabolite control protein A #=GS A0A0K2ML67/63-160_292-310 DR GENE3D; e185ffdd8f4af9f7b08433451742505b/63-160_292-310; #=GS A0A0K2ML67/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium beijerinckii; #=GS A0A0K2ML67/63-160_292-310 DR EC; 5.1.1.1; #=GS K6U538/61-160_292-307 AC K6U538 #=GS K6U538/61-160_292-307 OS Clostridium sp. Maddingley MBC34-26 #=GS K6U538/61-160_292-307 DE Transcriptional regulator #=GS K6U538/61-160_292-307 DR GENE3D; 464077cb7adbbb6e3330c7eb05188e83/61-160_292-307; #=GS K6U538/61-160_292-307 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. Maddingley MBC34-26; #=GS R0AA86/63-160_292-310 AC R0AA86 #=GS R0AA86/63-160_292-310 OS Clostridium butyricum 60E.3 #=GS R0AA86/63-160_292-310 DE Uncharacterized protein #=GS R0AA86/63-160_292-310 DR GENE3D; 3538bb62f9681812530140a898bbfa4d/63-160_292-310; #=GS R0AA86/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum; #=GS A0A0A6PXM4/63-160_292-310 AC A0A0A6PXM4 #=GS A0A0A6PXM4/63-160_292-310 OS Clostridium butyricum #=GS A0A0A6PXM4/63-160_292-310 DE Catabolite control protein A #=GS A0A0A6PXM4/63-160_292-310 DR GENE3D; 3538bb62f9681812530140a898bbfa4d/63-160_292-310; #=GS A0A0A6PXM4/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum; #=GS W1WEF5/63-160_292-310 AC W1WEF5 #=GS W1WEF5/63-160_292-310 OS human gut metagenome #=GS W1WEF5/63-160_292-310 DE Catabolite control protein A #=GS W1WEF5/63-160_292-310 DR GENE3D; 3538bb62f9681812530140a898bbfa4d/63-160_292-310; #=GS W1WEF5/63-160_292-310 DR ORG; human gut metagenome; #=GS C4IMH7/63-160_292-310 AC C4IMH7 #=GS C4IMH7/63-160_292-310 OS Clostridium butyricum E4 str. BoNT E BL5262 #=GS C4IMH7/63-160_292-310 DE Catabolite control protein A #=GS C4IMH7/63-160_292-310 DR GENE3D; 3538bb62f9681812530140a898bbfa4d/63-160_292-310; #=GS C4IMH7/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum; #=GS A0A0Q1DF19/63-160_292-310 AC A0A0Q1DF19 #=GS A0A0Q1DF19/63-160_292-310 OS Clostridium butyricum #=GS A0A0Q1DF19/63-160_292-310 DE Catabolite control protein A #=GS A0A0Q1DF19/63-160_292-310 DR GENE3D; 374568eb36fc2143be3aca627bfe90ec/63-160_292-310; #=GS A0A0Q1DF19/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum; #=GS A0A1F1LC21/63-160_292-310 AC A0A1F1LC21 #=GS A0A1F1LC21/63-160_292-310 OS Clostridium sp. HMSC19A10 #=GS A0A1F1LC21/63-160_292-310 DE Catabolite control protein A #=GS A0A1F1LC21/63-160_292-310 DR GENE3D; 374568eb36fc2143be3aca627bfe90ec/63-160_292-310; #=GS A0A1F1LC21/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. HMSC19A10; #=GS P58258/61-162_294-309 AC P58258 #=GS P58258/61-162_294-309 OS Clostridium acetobutylicum ATCC 824 #=GS P58258/61-162_294-309 DE HTH-type transcriptional regulator RegA #=GS P58258/61-162_294-309 DR GENE3D; fae83a46b106e3732df5dc52cb95c3da/61-162_294-309; #=GS P58258/61-162_294-309 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium acetobutylicum; #=GS G7LXE3/61-160_292-307 AC G7LXE3 #=GS G7LXE3/61-160_292-307 OS Clostridium sp. DL-VIII #=GS G7LXE3/61-160_292-307 DE Transcriptional regulator, LacI family #=GS G7LXE3/61-160_292-307 DR GENE3D; f99d1f15a2bba4a4581ddb738551eeda/61-160_292-307; #=GS G7LXE3/61-160_292-307 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. DL-VIII; #=GS Q45831/63-160_292-310 AC Q45831 #=GS Q45831/63-160_292-310 OS Clostridium saccharobutylicum #=GS Q45831/63-160_292-310 DE HTH-type transcriptional regulator RegA #=GS Q45831/63-160_292-310 DR GENE3D; be15a381ee284df23effd840784de1b5/63-160_292-310; #=GS Q45831/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium saccharobutylicum; #=GS U5MN70/63-160_292-310 AC U5MN70 #=GS U5MN70/63-160_292-310 OS Clostridium saccharobutylicum DSM 13864 #=GS U5MN70/63-160_292-310 DE HTH-type transcriptional regulator RegA #=GS U5MN70/63-160_292-310 DR GENE3D; be15a381ee284df23effd840784de1b5/63-160_292-310; #=GS U5MN70/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium saccharobutylicum; #=GS A0A0A7FWS8/63-160_292-310 AC A0A0A7FWS8 #=GS A0A0A7FWS8/63-160_292-310 OS Clostridium baratii str. Sullivan #=GS A0A0A7FWS8/63-160_292-310 DE Catabolite control protein A #=GS A0A0A7FWS8/63-160_292-310 DR GENE3D; 042b861d9630590cd0088129bafa2b43/63-160_292-310; #=GS A0A0A7FWS8/63-160_292-310 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium baratii; #=GS B2THV3/61-160_292-307 AC B2THV3 #=GS B2THV3/61-160_292-307 OS Clostridium botulinum B str. Eklund 17B (NRP) #=GS B2THV3/61-160_292-307 DE Catabolite control protein A #=GS B2THV3/61-160_292-307 DR GENE3D; fdccd3c42b0763ee3b43150bcc9ff98e/61-160_292-307; #=GS B2THV3/61-160_292-307 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS A0A0M0A663/61-160_292-307 AC A0A0M0A663 #=GS A0A0M0A663/61-160_292-307 OS Clostridium botulinum #=GS A0A0M0A663/61-160_292-307 DE Catabolite control protein A #=GS A0A0M0A663/61-160_292-307 DR GENE3D; fdccd3c42b0763ee3b43150bcc9ff98e/61-160_292-307; #=GS A0A0M0A663/61-160_292-307 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS N9XWW4/61-160_292-307 AC N9XWW4 #=GS N9XWW4/61-160_292-307 OS Clostridium colicanis 209318 #=GS N9XWW4/61-160_292-307 DE Catabolite control protein A #=GS N9XWW4/61-160_292-307 DR GENE3D; b5d09e0061952ede05d59b97d6f83bbb/61-160_292-307; #=GS N9XWW4/61-160_292-307 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium colicanis; #=GS M1MBS4/61-160_292-307 AC M1MBS4 #=GS M1MBS4/61-160_292-307 OS Clostridium saccharoperbutylacetonicum N1-4(HMT) #=GS M1MBS4/61-160_292-307 DE HTH-type transcriptional regulator RegA #=GS M1MBS4/61-160_292-307 DR GENE3D; 71493bd785357f6da083c7feb1be1120/61-160_292-307; #=GS M1MBS4/61-160_292-307 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium saccharoperbutylacetonicum; #=GF TC 222.5 5.9E-70 #=GF SQ 20 A0A1C8FPZ5/63-160_292-310 --IGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLREKMVDGVIYMSSSLNEEILELINELDIKTVLVETKDK--EGVLPSVTIDQPTYDMGSVAMRMLIKLLN A6LPF7/63-160_292-310 --IGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLREKMVDGVIYMSSSLNEEILELINELDIKTVLVETKDK--EGVLPSVTIDQPTYDMGSVAMRMLIKLLN A0A0B5QEQ2/63-160_292-310 --IGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLREKMVDGVIYMSSSLNEEILELINELDIKTVLVETKDK--EGVLPSVTIDQPTYDMGSVAMRMLIKLLN A0A0K2ML67/63-160_292-310 --IGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLREKMVDGVIYMSSSLNEEILELINELDIKTVLVETKDK--EGVLPSVTIDQPTYDMGSVAMRMLIKLLN K6U538/61-160_292-307 KTIGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLKEKMVDGVIYMSSSLNEEILELINELDLKTVLVETKDK--DGVLPSVTIDQPTYDMGSVAMRMLIK--- R0AA86/63-160_292-310 --IGILVPDISNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIDKEKEYLRVLKEKMVDGVIYMSSSLQDEILELINELDLKTVLVETKDK--NGLLPSVTIDQPTYDMGSVAMRMLIKLLN A0A0A6PXM4/63-160_292-310 --IGILVPDISNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIDKEKEYLRVLKEKMVDGVIYMSSSLQDEILELINELDLKTVLVETKDK--NGLLPSVTIDQPTYDMGSVAMRMLIKLLN W1WEF5/63-160_292-310 --IGILVPDISNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIDKEKEYLRVLKEKMVDGVIYMSSSLQDEILELINELDLKTVLVETKDK--NGLLPSVTIDQPTYDMGSVAMRMLIKLLN C4IMH7/63-160_292-310 --IGILVPDISNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIDKEKEYLRVLKEKMVDGVIYMSSSLQDEILELINELDLKTVLVETKDK--NGLLPSVTIDQPTYDMGSVAMRMLIKLLN A0A0Q1DF19/63-160_292-310 --IGILVPDISNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIDKEKEYLRVLKEKMVDGVIYMSSSLQDEILELINELDLKTVLVETKDK--NGLLPSVTIDQPTYDMGSVAMRMLIKLLN A0A1F1LC21/63-160_292-310 --IGILVPDISNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIDKEKEYLRVLKEKMVDGVIYMSSSLQDEILELINELDLKTVLVETKDK--NGLLPSVTIDQPTYDMGSVAMRMLIKLLN P58258/61-162_294-309 RTIGIVIPDISSQFYPEIVRGAEDVSNIYNYNVILCNTDLDISKEKDYIRVLKEKMVDGVIYMSNSLAPEILQLLRDLKIPTVLVETRESEDENAFPSVTIDQPTYDMGSVGMRMLIK--- G7LXE3/61-160_292-307 KTIGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLKEKMVDGVIYMSSSLNEEILELINELDLKTVLVETKDK--EGLLPSVTIDQPTYDMGSVAMRMLIK--- Q45831/63-160_292-310 --IGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLKEKMVDGVIYMSSSLRDEILELINELDLKTVLVETRDK--DGVLPSVTIDQPTYDMGSVAMRMLIKLLN U5MN70/63-160_292-310 --IGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLKEKMVDGVIYMSSSLRDEILELINELDLKTVLVETRDK--DGVLPSVTIDQPTYDMGSVAMRMLIKLLN A0A0A7FWS8/63-160_292-310 --IGILIPDISSQFYPEIVRGAEDVSNIYDYNIILGNSDFDVEKEKEYLRVLKEKMVDGVIYMSSSLQDEILDLINELDLKTILVETKDK--EGKLPSVTIDQPSYDMGSVAMRMLIKLLN B2THV3/61-160_292-307 KTIGILLPDVSNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIEKEKEYLRVLKEKMVDGVLYMSSSLQEEILELINELNLKTVLVETKDK--ESRLPSVTIDQPTYDMGSVAMRMLIK--- A0A0M0A663/61-160_292-307 KTIGILLPDVSNQLYPEIVRGAEDVSNIYDYNVILCNSDLDIEKEKEYLRVLKEKMVDGVLYMSSSLQEEILELINELNLKTVLVETKDK--ESRLPSVTIDQPTYDMGSVAMRMLIK--- N9XWW4/61-160_292-307 KTIGILIPDISSQFYPEIVRGAEDVSNIYDYNIILGNSDFDIQKEKEYLRVLKEKMVDGVIYMSSSLQEEILDLINELDITTVLVETEDK--NGKLPSVTIDQPSYDMGSVAMRMLIK--- M1MBS4/61-160_292-307 KTIGILLPDISNQFYPEIVRGAEDVSNIYDYNIILCNSDLDIEKEKEYLRVLKEKMVDGVIYMSISLNSEILDLINELDVKTVLVETKDR--EGVLPSVTIDQPTYDMGSVAMRMLIK--- #=GC scorecons 1199975998969699999999999999979979979797985999897999799999997999799459996977896669899997870066379999999979999997999999222 #=GC scorecons_70 __****_***********************************_************************__*********************___*_***********************___ #=GC scorecons_80 __****_****_*_******************_*********_*********************_**__***_*****___******_*______***********************___ #=GC scorecons_90 __***__****_*_***************_**_**_*_*_**_*****_***_*******_***_**__***_*__**___******_*_______********_******_******___ //