# STOCKHOLM 1.0 #=GF ID 3.40.50.2300/FF/151173 #=GF DE Sporulation transcription factor Spo0A #=GF AC 3.40.50.2300/FF/151173 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 56.464 #=GS Q18B74/5-137 AC Q18B74 #=GS Q18B74/5-137 OS Clostridioides difficile 630 #=GS Q18B74/5-137 DE Stage 0 sporulation protein A homolog #=GS Q18B74/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS Q18B74/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS Q18B74/5-137 DR GO; GO:0032993; GO:0043565; #=GS U2CLF1/1-139 AC U2CLF1 #=GS U2CLF1/1-139 OS Clostridiales bacterium oral taxon 876 str. F0540 #=GS U2CLF1/1-139 DE Stage 0 sporulation protein A homolog #=GS U2CLF1/1-139 DR GENE3D; 034d65020bdbc8ef62c751877e36137a/1-139; #=GS U2CLF1/1-139 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales bacterium oral taxon 876; #=GS J7FTL3/1-138 AC J7FTL3 #=GS J7FTL3/1-138 OS Clostridium saccharoperbutylacetonicum N1-4(HMT) #=GS J7FTL3/1-138 DE Stage 0 sporulation protein A homolog #=GS J7FTL3/1-138 DR GENE3D; 24302ac97b3bc2797d50fb5493134e75/1-138; #=GS J7FTL3/1-138 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium saccharoperbutylacetonicum; #=GS Q9L340/1-140 AC Q9L340 #=GS Q9L340/1-140 OS Clostridium beijerinckii #=GS Q9L340/1-140 DE Stage 0 sporulation protein A homolog #=GS Q9L340/1-140 DR GENE3D; 5a504db0b175625c6c3374685c180435/1-140; #=GS Q9L340/1-140 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium beijerinckii; #=GS P52936/1-140 AC P52936 #=GS P52936/1-140 OS Clostridium beijerinckii NCIMB 8052 #=GS P52936/1-140 DE Stage 0 sporulation protein A homolog #=GS P52936/1-140 DR GENE3D; 5a504db0b175625c6c3374685c180435/1-140; #=GS P52936/1-140 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium beijerinckii; #=GS A0A0A6Q263/1-142 AC A0A0A6Q263 #=GS A0A0A6Q263/1-142 OS Clostridium butyricum #=GS A0A0A6Q263/1-142 DE Stage 0 sporulation protein A homolog #=GS A0A0A6Q263/1-142 DR GENE3D; 5faeb889bf163b77bd730f03be66aa46/1-142; #=GS A0A0A6Q263/1-142 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum; #=GS C4IL90/1-142 AC C4IL90 #=GS C4IL90/1-142 OS Clostridium butyricum E4 str. BoNT E BL5262 #=GS C4IL90/1-142 DE Stage 0 sporulation protein A homolog #=GS C4IL90/1-142 DR GENE3D; 5faeb889bf163b77bd730f03be66aa46/1-142; #=GS C4IL90/1-142 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium butyricum; #=GS U5MS68/1-131 AC U5MS68 #=GS U5MS68/1-131 OS Clostridium saccharobutylicum DSM 13864 #=GS U5MS68/1-131 DE Stage 0 sporulation protein A homolog #=GS U5MS68/1-131 DR GENE3D; 6a1580dc9595da2f3a8481b692db967a/1-131; #=GS U5MS68/1-131 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium saccharobutylicum; #=GS G7M129/1-138 AC G7M129 #=GS G7M129/1-138 OS Clostridium sp. DL-VIII #=GS G7M129/1-138 DE Stage 0 sporulation protein A homolog #=GS G7M129/1-138 DR GENE3D; abb2e88f2866ac6ef29587832c3dffb5/1-138; #=GS G7M129/1-138 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. DL-VIII; #=GS K6TE23/1-135 AC K6TE23 #=GS K6TE23/1-135 OS Clostridium sp. Maddingley MBC34-26 #=GS K6TE23/1-135 DE Stage 0 sporulation protein A homolog #=GS K6TE23/1-135 DR GENE3D; cc444b4ca0d88e06cc9d275c31fa4a07/1-135; #=GS K6TE23/1-135 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. Maddingley MBC34-26; #=GS P58253/1-142 AC P58253 #=GS P58253/1-142 OS Clostridium acetobutylicum ATCC 824 #=GS P58253/1-142 DE Stage 0 sporulation protein A homolog #=GS P58253/1-142 DR GENE3D; ce9252063bf3afc9bfc995b5235abce1/1-142; #=GS P58253/1-142 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium acetobutylicum; #=GS W6NDD6/1-140 AC W6NDD6 #=GS W6NDD6/1-140 OS Clostridium tyrobutyricum DIVETGP #=GS W6NDD6/1-140 DE Stage 0 sporulation protein A homolog #=GS W6NDD6/1-140 DR GENE3D; d11c3ded4b2a72138c818420348279ea/1-140; #=GS W6NDD6/1-140 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium tyrobutyricum; #=GS A0A1M2Y928/5-137 AC A0A1M2Y928 #=GS A0A1M2Y928/5-137 OS Clostridioides difficile #=GS A0A1M2Y928/5-137 DE Sporulation transcription factor Spo0A #=GS A0A1M2Y928/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS A0A1M2Y928/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS A0A0H3N5N4/5-137 AC A0A0H3N5N4 #=GS A0A0H3N5N4/5-137 OS Clostridioides difficile CD196 #=GS A0A0H3N5N4/5-137 DE Stage 0 sporulation protein A homolog #=GS A0A0H3N5N4/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS A0A0H3N5N4/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS G6BMU9/5-137 AC G6BMU9 #=GS G6BMU9/5-137 OS Clostridioides difficile 050-P50-2011 #=GS G6BMU9/5-137 DE Stage 0 sporulation protein A homolog #=GS G6BMU9/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS G6BMU9/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS G6B7U1/5-137 AC G6B7U1 #=GS G6B7U1/5-137 OS Clostridioides difficile 002-P50-2011 #=GS G6B7U1/5-137 DE Stage 0 sporulation protein A homolog #=GS G6B7U1/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS G6B7U1/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS D5S2Z8/5-137 AC D5S2Z8 #=GS D5S2Z8/5-137 OS Clostridioides difficile NAP07 #=GS D5S2Z8/5-137 DE Stage 0 sporulation protein A homolog #=GS D5S2Z8/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS D5S2Z8/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS T4HYN8/5-137 AC T4HYN8 #=GS T4HYN8/5-137 OS Clostridioides difficile Y384 #=GS T4HYN8/5-137 DE Stage 0 sporulation protein A homolog #=GS T4HYN8/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS T4HYN8/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS A0A1F2D6E3/5-137 AC A0A1F2D6E3 #=GS A0A1F2D6E3/5-137 OS Clostridium sp. HMSC19B10 #=GS A0A1F2D6E3/5-137 DE Stage 0 sporulation protein A homolog #=GS A0A1F2D6E3/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS A0A1F2D6E3/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. HMSC19B10; #=GS C9YKF1/5-137 AC C9YKF1 #=GS C9YKF1/5-137 OS Clostridioides difficile R20291 #=GS C9YKF1/5-137 DE Stage 0 sporulation protein A homolog #=GS C9YKF1/5-137 DR GENE3D; 3ee9696e0120d4dbc11c65d9e42c9857/5-137; #=GS C9YKF1/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS R4KAW5/2-138 AC R4KAW5 #=GS R4KAW5/2-138 OS Clostridium pasteurianum BC1 #=GS R4KAW5/2-138 DE Stage 0 sporulation protein A homolog #=GS R4KAW5/2-138 DR GENE3D; 45bac98f43e4e2cff94e29d1c399ef3b/2-138; #=GS R4KAW5/2-138 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium pasteurianum; #=GS P52938/5-137 AC P52938 #=GS P52938/5-137 OS Clostridioides difficile #=GS P52938/5-137 DE Stage 0 sporulation protein A homolog #=GS P52938/5-137 DR GENE3D; 7c9d2a12da9ebd1308e5019d77dfa1ea/5-137; #=GS P52938/5-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile; #=GS B2TRL8/1-139 AC B2TRL8 #=GS B2TRL8/1-139 OS Clostridium botulinum B str. Eklund 17B (NRP) #=GS B2TRL8/1-139 DE Stage 0 sporulation protein A homolog #=GS B2TRL8/1-139 DR GENE3D; 80dc65cb28a5c35f997570f6459ddc58/1-139; #=GS B2TRL8/1-139 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium botulinum; #=GS A0A099SB77/2-137 AC A0A099SB77 #=GS A0A099SB77/2-137 OS Clostridium sp. HMP27 #=GS A0A099SB77/2-137 DE Stage 0 sporulation protein A homolog #=GS A0A099SB77/2-137 DR GENE3D; c44945359e0eb15eeef6f7607bcd23b9/2-137; #=GS A0A099SB77/2-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium sp. HMP27; #=GS A0A037Z5P9/1-137 AC A0A037Z5P9 #=GS A0A037Z5P9/1-137 OS Clostridium tetanomorphum DSM 665 #=GS A0A037Z5P9/1-137 DE Stage 0 sporulation protein A homolog #=GS A0A037Z5P9/1-137 DR GENE3D; 73e86fa38e5a9dcd7c08e48a73e1e8d6/1-137; #=GS A0A037Z5P9/1-137 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium tetanomorphum; #=GS A0A0H3J7V5/2-139 AC A0A0H3J7V5 #=GS A0A0H3J7V5/2-139 OS Clostridium pasteurianum DSM 525 = ATCC 6013 #=GS A0A0H3J7V5/2-139 DE Stage 0 sporulation protein A homolog #=GS A0A0H3J7V5/2-139 DR GENE3D; f67c3e37031d38f0d8e7e9661030f7c7/2-139; #=GS A0A0H3J7V5/2-139 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium pasteurianum; #=GS S6ERM3/2-136 AC S6ERM3 #=GS S6ERM3/2-136 OS Clostridium chauvoei JF4335 #=GS S6ERM3/2-136 DE Stage 0 sporulation protein A homolog #=GS S6ERM3/2-136 DR GENE3D; be637c61c885e8c806ff7f5c5b7cc26d/2-136; #=GS S6ERM3/2-136 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium chauvoei; #=GF TC 238.5 1.5E-74 #=GF SQ 27 Q18B74/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- U2CLF1/1-139 MEDSKISVIIADDNKEFCNILNDYLLNQRDIVVTGIAKDGVEALKLIQEKKPDLVVLDIIMPHLDGLGVLERLNSMNINPMPRIIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIRQMFNNTISG-DETKRTVS--- J7FTL3/1-138 MEDSKISVLIADDNKEFCSILNDYLLNQKDIVVTGIAKDGREALDLIVERKPDLVILDIIMPHLDGLGVLEKLNTMNLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNGAPAQ-ESNVRAS---- Q9L340/1-140 MEDSKISVLIADDNKEFCSILNDYLLNQKDIVVTGIAKDGREALELIVERKPDLVILDIIMPHLDGLGVLEKLNTMQLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSSAAVQETNMRNSY--- P52936/1-140 MEDSKISVLIADDNKEFCSILNDYLLNQKDIVVTGIAKDGREALELIVERKPDLVILDIIMPHLDGLGVLEKLNTMQLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSSAAVQETNMRNSY--- A0A0A6Q263/1-142 MEDSKISVLIADDNKEFCSILNDYLLNQKDIVVTGIAKDGREALELIVERKPDLVILDIIMPHLDGLGVLEKLNTMDLEKTPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSAPTIQESSAQSNRVS- C4IL90/1-142 MEDSKISVLIADDNKEFCSILNDYLLNQKDIVVTGIAKDGREALELIVERKPDLVILDIIMPHLDGLGVLEKLNTMDLEKTPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSAPTIQESSAQSNRVS- U5MS68/1-131 MEDSKISVLIADDNKEFCSILNDYLLNQRDIVVTGIAKDGREALDLIVERKPDLVILDIIMPHLDGLGVLEKLNTMDLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSAPTS------------ G7M129/1-138 MEDSKISVLIADDNKEFCSILNDYLLNQRDIVVTGIAKDGREALELIVEKKPDLVILDIIMPHLDGLGVLEKLNTMDLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFSNNITR-ETSIRSS---- K6TE23/1-135 MEDSKISVLIADDNKEFCSILNDYLLNQRDIVVTGIAKDGREALDLIVEKKPDLVILDIIMPHLDGLGVLEKLNTMQLEKVPRIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFSVAPVQ-ESNI------- P58253/1-142 MESRKISVLIADDNKEFCNILNDYLLNQSDMIVVGIAKDGVEALKLIENKKPDLVVLDIIMPRLDGLGVLEKLNNKDAENLPRIIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTNRIREMFNNTISN-SEQKRSYQVEE W6NDD6/1-140 MEESKISVVIADDNKEFCNILNDYLLNQRDIVVTGTAKDGLEALELIQEKRPDLVVLDIIMPHLDGLGVLERLNNMDINPLPRVIVLSAVGQDKITQRAINLGADYYVVKPFDMDVFTKRIRQMFNNDIANSSESKKTVL--- A0A1M2Y928/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- A0A0H3N5N4/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- G6BMU9/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- G6B7U1/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- D5S2Z8/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- T4HYN8/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- A0A1F2D6E3/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- C9YKF1/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- R4KAW5/2-138 -EYSKISVLIADDNKEFCNILNDYLLNQSDIVVVGIAKDGIEALKLIEEKKPDLVILDIIMPHLDGLGVLERLGNMDINPVPNVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIRQMFNNTILD-SDTKKTM---- P52938/5-137 -LVEKIKIVLADDNKDFCQVLKEYLSNEDDIDILGIAKDGIEALDLVKKTQPDLLILDVIMPHLDGLGVIEKLNTMDIPKMPKIIVLSAVGQDKITQSAINLGADYYIVKPFDFVVFINRIRELVSNRVTQ-VEP-------- B2TRL8/1-139 MEDKKISVLIADDNKEFCSILNDYLLNQRNIIVTGIAKDGREALDLVVEKKPDLLILDIIMPHLDGLGVLERLNTMNLEKMPKIIILSAVGQDKITQQAITLGADYYTVKPFDMEVFTKRIREMFNSETDN-QSIRRTSS--- A0A099SB77/2-137 -VDSKINVVIADDNKEFCNILNDYLLNQRDIVVVGIAKDGLEALKLIEEKKPDLVVLDIIMPHLDGLGVLERLNGMNIDPMPRIIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIRQMFNNTISS-DEVKRS----- A0A037Z5P9/1-137 MEDSKISVVIADDNKEFCNILNDYLLNQRDIVVVGVAKDGVEALKLIEEKKPDLVVLDIIMPHLDGLGVLEKLNSMDIEPMPRIIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIRQMFNNTISSGDEVKR------ A0A0H3J7V5/2-139 -EYSKISVLIADDNKEFCNILNDYLLNQSDIVVVGIAKDGIEALKLIEEKKPDLVILDIIMPHLDGLGVLEKLANINIDPVPNVIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIRQMFNNTILD-SETKKTMP--- S6ERM3/2-136 -NGTKISVLIADDNKEFCSILNDYLLNQRDIVVTGVAKDGREALALIEEKKPDLVVLDIIMPHLDGLGVLEKLNTMNLEKMPRIIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIREMFNGAPTE--SIRKT----- #=GC scorecons 24459957669999979947967995964884759899994999597465699967997999899999969798686646596897999999999994996999999599999649966999766664453035312100000 #=GC scorecons_70 ____**_***********_******_**_**_*_******_***_**___**************************_*___****************_*********_*****__*********___________________ #=GC scorecons_80 ____**_*__********_**_***_*__**_*_******_***_**____***_**************_****_*_____*_**************_**_******_*****__**__****____________________ #=GC scorecons_90 ____**____*****_**__*__**_*__**___*_****_***_*_____***__**_**********_*_*________*_**_***********_**_******_*****__**__***_____________________ //