# STOCKHOLM 1.0 #=GF ID 3.40.250.10/FF/16052 #=GF DE Ubiquitin carboxyl-terminal hydrolase 4 #=GF AC 3.40.250.10/FF/16052 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 58.010 #=GS P32571/185-331 AC P32571 #=GS P32571/185-331 OS Saccharomyces cerevisiae S288C #=GS P32571/185-331 DE Ubiquitin carboxyl-terminal hydrolase 4 #=GS P32571/185-331 DR GENE3D; 651b0b083a7b3aaa021d724cb70e6cbb/185-331; #=GS P32571/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS P32571/185-331 DR GO; GO:0000502; GO:0004843; GO:0005515; GO:0005768; GO:0006275; GO:0006511; GO:0006897; GO:0010992; GO:0010995; GO:0043162; GO:0070676; GO:1904669; #=GS P32571/185-331 DR EC; 3.4.19.12; #=GS A6ZY34/185-331 AC A6ZY34 #=GS A6ZY34/185-331 OS Saccharomyces cerevisiae YJM789 #=GS A6ZY34/185-331 DE Ubiquitin carboxyl-terminal hydrolase 4 #=GS A6ZY34/185-331 DR GENE3D; 2c1c3f4ffa3ece2c97bb67c178fdcd03/185-331; #=GS A6ZY34/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS A6ZY34/185-331 DR EC; 3.4.19.12; #=GS C8Z4Y7/185-331 AC C8Z4Y7 #=GS C8Z4Y7/185-331 OS Saccharomyces cerevisiae EC1118 #=GS C8Z4Y7/185-331 DE Doa4p #=GS C8Z4Y7/185-331 DR GENE3D; 651b0b083a7b3aaa021d724cb70e6cbb/185-331; #=GS C8Z4Y7/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS C8Z4Y7/185-331 DR EC; 3.4.19.12; #=GS B3LGK1/185-331 AC B3LGK1 #=GS B3LGK1/185-331 OS Saccharomyces cerevisiae RM11-1a #=GS B3LGK1/185-331 DE Ubiquitin carboxyl-terminal hydrolase 4 #=GS B3LGK1/185-331 DR GENE3D; c111890bd9ccec401aa2417ee4ac340f/185-331; #=GS B3LGK1/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS B3LGK1/185-331 DR EC; 3.4.19.12; #=GS A0A0L8VSW5/185-331 AC A0A0L8VSW5 #=GS A0A0L8VSW5/185-331 OS Saccharomyces sp. 'boulardii' #=GS A0A0L8VSW5/185-331 DE DOA4p Ubiquitin hydrolase #=GS A0A0L8VSW5/185-331 DR GENE3D; c111890bd9ccec401aa2417ee4ac340f/185-331; #=GS A0A0L8VSW5/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; #=GS A0A0L8VSW5/185-331 DR EC; 3.4.19.12; #=GS H0GE29/185-331 AC H0GE29 #=GS H0GE29/185-331 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GE29/185-331 DE Doa4p #=GS H0GE29/185-331 DR GENE3D; c111890bd9ccec401aa2417ee4ac340f/185-331; #=GS H0GE29/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS H0GE29/185-331 DR EC; 3.4.19.12; #=GS Q6FQF0/188-331 AC Q6FQF0 #=GS Q6FQF0/188-331 OS Candida glabrata CBS 138 #=GS Q6FQF0/188-331 DE Ubiquitin carboxyl-terminal hydrolase 4 #=GS Q6FQF0/188-331 DR GENE3D; d8acfd5bcd908ec152dcf8bd6942855c/188-331; #=GS Q6FQF0/188-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; [Candida] glabrata; #=GS Q6FQF0/188-331 DR EC; 3.4.19.12; #=GS A0A0W0D0V1/188-331 AC A0A0W0D0V1 #=GS A0A0W0D0V1/188-331 OS [Candida] glabrata #=GS A0A0W0D0V1/188-331 DE Ubiquitin carboxyl-terminal hydrolase 4 #=GS A0A0W0D0V1/188-331 DR GENE3D; d8acfd5bcd908ec152dcf8bd6942855c/188-331; #=GS A0A0W0D0V1/188-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; [Candida] glabrata; #=GS A0A0W0D0V1/188-331 DR EC; 3.4.19.12; #=GS A0A0L8RP28/185-329 AC A0A0L8RP28 #=GS A0A0L8RP28/185-329 OS Saccharomyces eubayanus #=GS A0A0L8RP28/185-329 DE DOA4-like protein #=GS A0A0L8RP28/185-329 DR GENE3D; 013c27e268738fadc96ed545541b91b3/185-329; #=GS A0A0L8RP28/185-329 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; #=GS G2WAH3/185-331 AC G2WAH3 #=GS G2WAH3/185-331 OS Saccharomyces cerevisiae Kyokai no. 7 #=GS G2WAH3/185-331 DE K7_Doa4p #=GS G2WAH3/185-331 DR GENE3D; 120af5cea4d4b24677e59c267eab3a87/185-331; #=GS G2WAH3/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS E7KAR1/98-244 AC E7KAR1 #=GS E7KAR1/98-244 OS Saccharomyces cerevisiae AWRI796 #=GS E7KAR1/98-244 DE Doa4p #=GS E7KAR1/98-244 DR GENE3D; 19578f5b5d41a2605ae56f7502acac5c/98-244; #=GS E7KAR1/98-244 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GS H0GSN1/184-327 AC H0GSN1 #=GS H0GSN1/184-327 OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 #=GS H0GSN1/184-327 DE Doa4p #=GS H0GSN1/184-327 DR GENE3D; 30d02a1b785a876bed0675043bd2b45e/184-327; #=GS H0GSN1/184-327 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; #=GS J5RHM3/185-327 AC J5RHM3 #=GS J5RHM3/185-327 OS Saccharomyces kudriavzevii IFO 1802 #=GS J5RHM3/185-327 DE DOA4-like protein #=GS J5RHM3/185-327 DR GENE3D; 31dc1f1c9893d6310da64a2e675fd0a5/185-327; #=GS J5RHM3/185-327 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; #=GS J8PQ51/185-327 AC J8PQ51 #=GS J8PQ51/185-327 OS Saccharomyces arboricola H-6 #=GS J8PQ51/185-327 DE Doa4p #=GS J8PQ51/185-327 DR GENE3D; 34e132b3a7c2a6c7dd1aeee9383e1e58/185-327; #=GS J8PQ51/185-327 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces arboricola; #=GS N1P6I0/185-331 AC N1P6I0 #=GS N1P6I0/185-331 OS Saccharomyces cerevisiae CEN.PK113-7D #=GS N1P6I0/185-331 DE Doa4p #=GS N1P6I0/185-331 DR GENE3D; 82341ae6a883ff31f1c1a0cfcad94fe1/185-331; #=GS N1P6I0/185-331 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; #=GF TC 220.2 4.4E-69 #=GF SQ 15 P32571/185-331 -SYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSS-- A6ZY34/185-331 -SYITSNQLNSLISSSANSTSSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGSQVSSS-- C8Z4Y7/185-331 -SYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSS-- B3LGK1/185-331 -SYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSS-- A0A0L8VSW5/185-331 -SYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSS-- H0GE29/185-331 -SYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSS-- Q6FQF0/188-331 -SGISCSELLSLMKMKEDS------LLLIDVRPKLEYDAHHIKTKNIICIEPISFKESYSDQQIEKTSMIPSPKHEIQLFQRRSEFQYIILYTDLEEKSNFYFQQLKSLLEILLQRSFLRPIDDRKTKVLFLSDSLQNWIKN--GGEIDKSQE A0A0W0D0V1/188-331 -SGISCSELLSLMKMKEDS------LLLIDVRPKLEYDAHHIKTKNIICIEPISFKESYSDQQIEKTSMIPSPKHEIQLFQRRSEFQYIILYTDLEEKSNFYFQQLKSLLEILLQRSFLRPIDDRKTKVLFLSDSLQNWIKN--GGEIDKSQE A0A0L8RP28/185-329 -SHITPDQLNSLIVLSTSSSSSQMETLLIDIRSRLEFKKSHIDFKNIICLEPVSFKMSYSDRDLEKKSLITSPNDEIKLFQSRNLFKFIILYTDSND---YNVRQQAVLLDILLNRSFEKPISNDFTKIFILQSGFPGWLSSNHVNQTS---- G2WAH3/185-331 -SYITSNQLNSLISSSANSTSSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGSQVSSS-- E7KAR1/98-244 -SYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSS-- H0GSN1/184-327 GSYITPDQLNSLIISSTSSSSSQMETLLIDIRSRLEFDKSHIASKNIICLEPISFKISYSDHDLEKKSLITSPNNEIKLFQSRNLFKFIILYTDSNE---YNIKQQSALLDILLNHSFEKPISSDFTKVFILKSGFPSWLNSNHGKQ------ J5RHM3/185-327 -SYITPDQLNSLIISSTSSSSSQMETLLIDIRSRLEFDKSHIASKNIICLEPISFKISYSDHDLEKKSLITSPNNEIKLFQSRNLFKFIILYTDSNE---YNIKQQSALLDILLNHSFEKPISSDFTKVFILKSGFPSWLNSNHGKQ------ J8PQ51/185-327 -SYITPDQLNSLVISSTSSPSSQMESLLIDIRPRLEFNRSHIDSKNIICLEPISFKMSYSDHDLEKKSLITSPNDEIKLFQSRNLFKFIILYTDSNE---YNIKQQSVLLDILLNHSFEKPISNDFTKIFILKAGFPNWLNSNHGNQ------ N1P6I0/185-331 -SYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFKKSHIDTKNIICLEPISFKMTYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANE---YNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSS-- #=GC scorecons 094964569599635545924444449999796799755599469999969989994899966699596969964996699596496799999946800075569555997996669947996654997669456665966643746332400 #=GC scorecons_70 _*_**__**_***_____*_______******_****___**__************_*****_***_*******_******_**_*********_**___*__**___******_***_***_*__****_*__**__**_*__*_*______ #=GC scorecons_80 _*_*____*_**______*_______******_****___**__*****_******_****___**_*_*_**__**__**_*__*_*******__*___*___*___*****___**_***____**___*______*_____*________ #=GC scorecons_90 _*_*____*_**______*_______****_*__**____**__*****_******_****___**_*_*_**__**__**_*__*__******__*_______*___**_**___**__**____**___*______*______________ //