# STOCKHOLM 1.0
#=GF ID 3.40.220.10/FF/5045
#=GF DE Replicase polyprotein 1ab
#=GF AC 3.40.220.10/FF/5045
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 28.850
#=GS P0C6W4/1183-1349  AC P0C6W4
#=GS P0C6W4/1183-1349  OS Pipistrellus bat coronavirus HKU5
#=GS P0C6W4/1183-1349  DE Replicase polyprotein 1ab
#=GS P0C6W4/1183-1349  DR GENE3D; c893ff9d2f1541c963a57b2d384de049/1183-1349; 
#=GS P0C6W4/1183-1349  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Pipistrellus bat coronavirus HKU5; 
#=GS P0C6W4/1183-1349  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6T4/1148-1315  AC P0C6T4
#=GS P0C6T4/1148-1315  OS Tylonycteris bat coronavirus HKU4
#=GS P0C6T4/1148-1315  DE Replicase polyprotein 1a
#=GS P0C6T4/1148-1315  DR GENE3D; bd8bd803567895248f413f0030cc41c0/1148-1315; 
#=GS P0C6T4/1148-1315  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6T4/1148-1315  DR EC; 3.4.19.12; 3.4.22.69; 
#=GS P0C6W1/1155-1322  AC P0C6W1
#=GS P0C6W1/1155-1322  OS Bat coronavirus (BtCoV/133/2005)
#=GS P0C6W1/1155-1322  DE Replicase polyprotein 1ab
#=GS P0C6W1/1155-1322  DR GENE3D; f2aaf872be358d037d210bc664e4ced0/1155-1322; 
#=GS P0C6W1/1155-1322  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6W1/1155-1322  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6W3/1148-1315  AC P0C6W3
#=GS P0C6W3/1148-1315  OS Tylonycteris bat coronavirus HKU4
#=GS P0C6W3/1148-1315  DE Replicase polyprotein 1ab
#=GS P0C6W3/1148-1315  DR GENE3D; c7d2f681657730ba06b34638b88fcb9e/1148-1315; 
#=GS P0C6W3/1148-1315  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6W3/1148-1315  DR EC; 2.7.7.48; 3.4.19.12; 3.4.22.69; 3.6.4.12; 3.6.4.13; 
#=GS P0C6F7/1155-1322  AC P0C6F7
#=GS P0C6F7/1155-1322  OS Bat coronavirus (BtCoV/133/2005)
#=GS P0C6F7/1155-1322  DE Replicase polyprotein 1a
#=GS P0C6F7/1155-1322  DR GENE3D; 2f359ef34767c887f52c40b2c2f5394b/1155-1322; 
#=GS P0C6F7/1155-1322  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Tylonycteris bat coronavirus HKU4; 
#=GS P0C6F7/1155-1322  DR EC; 3.4.19.12; 3.4.22.69; 
#=GS P0C6T5/1183-1349  AC P0C6T5
#=GS P0C6T5/1183-1349  OS Pipistrellus bat coronavirus HKU5
#=GS P0C6T5/1183-1349  DE Replicase polyprotein 1a
#=GS P0C6T5/1183-1349  DR GENE3D; 0b06a63fae2c009a4391c1782317b19e/1183-1349; 
#=GS P0C6T5/1183-1349  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Betacoronavirus; Pipistrellus bat coronavirus HKU5; 
#=GS P0C6T5/1183-1349  DR EC; 3.4.19.12; 3.4.22.69; 
#=GF TC 337.5 5.0E-105
#=GF SQ 6
P0C6W4/1183-1349          -AENPLKNFKHIVLNNDVTLVFGDAIAVARATEDCILVNAANTHLKHGGGIAAAIDRASGGLVQAESDDYVNFYGPLNVGDSTLLKGHGLATGILHVVGPDARANQDIQLLKRCYKAFNKYPLVVSPLISAGIFCVEPRVSLEYLLSVVHTKTYVVVNSEKVYNDLAA
P0C6T4/1148-1315          KSKVDLSKYKHTVINNSVTLVLGDAIQIASLLPKCILVNAANRHLKHGGGIAGVINKASGGDVQEESDEYISNNGPLHVGDSVLLKGHGLADAILHVVGPDARNNEDAALLKRCYKAFNKHTIVVTPLISAGIFSVDPKVSFEYLLANVTTTTYVVVNNEDIYNTLAT
P0C6W1/1155-1322          KSKVDLSKYKHTVINNSVTLVLGDAIQIASLLPKCVLVNAANRHLKHGGGIAGAINKASGGDVQEESDEYISNSGPLHVGDSVLLKGYGLADAILRVVGPDARNNEDAALLKRCYKTFNKHTIVVTPLISSGIFSVDPKVSFEYLLANVTTTTYVVVNNEDIYNTLAT
P0C6W3/1148-1315          KSKVDLSKYKHTVINNSVTLVLGDAIQIASLLPKCILVNAANRHLKHGGGIAGVINKASGGDVQEESDEYISNNGPLHVGDSVLLKGHGLADAILHVVGPDARNNEDAALLKRCYKAFNKHTIVVTPLISAGIFSVDPKVSFEYLLANVTTTTYVVVNNEDIYNTLAT
P0C6F7/1155-1322          KSKVDLSKYKHTVINNSVTLVLGDAIQIASLLPKCVLVNAANRHLKHGGGIAGAINKASGGDVQEESDEYISNSGPLHVGDSVLLKGYGLADAILRVVGPDARNNEDAALLKRCYKTFNKHTIVVTPLISSGIFSVDPKVSFEYLLANVTTTTYVVVNNEDIYNTLAT
P0C6T5/1183-1349          -AENPLKNFKHIVLNNDVTLVFGDAIAVARATEDCILVNAANTHLKHGGGIAAAIDRASGGLVQAESDDYVNFYGPLNVGDSTLLKGHGLATGILHVVGPDARANQDIQLLKRCYKAFNKYPLVVSPLISAGIFCVEPRVSLEYLLSVVHTKTYVVVNSEKVYNDLAA
#=GC scorecons            255449457995969959999699994694444597999999499999999956966999939949996965449995999959999799945996999999959695499999996999656995999969995969699699995494949999995956994996
#=GC scorecons_70         _____*__***_*_**_****_****_**_____********_*********_**_*****_**_******___***_****_********__**********_*_*__************__**_********_******_****__*_*_******_*_***_**_
#=GC scorecons_80         _____*___**_*_**_****_****__*_____********_*********__*__****_**_***_*____***_****_********__**_*******_*_*__*******_***___**_****_***_*_*_**_****__*_*_******_*__**_**_
#=GC scorecons_90         _____*___**_*_**_****_****__*_____*_******_*********__*__****_**_***_*____***_****_****_***__**_*******_*_*__*******_***___**_****_***_*_*_**_****__*_*_******_*__**_**_
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