# STOCKHOLM 1.0
#=GF ID 3.40.220.10/FF/2631
#=GF DE Replicase polyprotein 1a
#=GF AC 3.40.220.10/FF/2631
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 5.284
#=GS P0C6Y4/1289-1451      AC P0C6Y4
#=GS P0C6Y4/1289-1451      OS Porcine epidemic diarrhea virus CV777
#=GS P0C6Y4/1289-1451      DE Replicase polyprotein 1ab
#=GS P0C6Y4/1289-1451      DR GENE3D; fc7cea9ed26ec9f7bf280d7f9f4b95e1/1289-1451; 
#=GS P0C6Y4/1289-1451      DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Porcine epidemic diarrhea virus; 
#=GS P0C6Y4/1289-1451      DR EC; 2.7.7.48; 3.4.19.12; 3.6.4.12; 3.6.4.13; 
#=GS P0C6V6/1289-1451      AC P0C6V6
#=GS P0C6V6/1289-1451      OS Porcine epidemic diarrhea virus CV777
#=GS P0C6V6/1289-1451      DE Replicase polyprotein 1a
#=GS P0C6V6/1289-1451      DR GENE3D; c1654e985dc75502651e9a0bd6d30c66/1289-1451; 
#=GS P0C6V6/1289-1451      DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Porcine epidemic diarrhea virus; 
#=GS P0C6V6/1289-1451      DR EC; 3.4.19.12; 
#=GS A0A067YRM0/1281-1443  AC A0A067YRM0
#=GS A0A067YRM0/1281-1443  OS Porcine epidemic diarrhea virus
#=GS A0A067YRM0/1281-1443  DE Polyprotein
#=GS A0A067YRM0/1281-1443  DR GENE3D; 3790cbb4d2c2f619b91d80a4bc3cc823/1281-1443; 
#=GS A0A067YRM0/1281-1443  DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Porcine epidemic diarrhea virus; 
#=GS U6BPB2/1289-1451      AC U6BPB2
#=GS U6BPB2/1289-1451      OS Porcine epidemic diarrhea virus
#=GS U6BPB2/1289-1451      DE Polyprotein 1a
#=GS U6BPB2/1289-1451      DR GENE3D; 82067c7f46d63a983eabbd66fc2b41c3/1289-1451; 
#=GS U6BPB2/1289-1451      DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Porcine epidemic diarrhea virus; 
#=GS A0A0N9DV71/394-556    AC A0A0N9DV71
#=GS A0A0N9DV71/394-556    OS Porcine epidemic diarrhea virus
#=GS A0A0N9DV71/394-556    DE Non-structural protein 3
#=GS A0A0N9DV71/394-556    DR GENE3D; a0112c2fea16a269c4100ee39dcb127c/394-556; 
#=GS A0A0N9DV71/394-556    DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Porcine epidemic diarrhea virus; 
#=GS R4JK63/1289-1451      AC R4JK63
#=GS R4JK63/1289-1451      OS Porcine epidemic diarrhea virus
#=GS R4JK63/1289-1451      DE Polyprotein
#=GS R4JK63/1289-1451      DR GENE3D; b01ff46052e3214571b7a3669d6bafb3/1289-1451; 
#=GS R4JK63/1289-1451      DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Porcine epidemic diarrhea virus; 
#=GS K4L9I6/1289-1451      AC K4L9I6
#=GS K4L9I6/1289-1451      OS Porcine epidemic diarrhea virus
#=GS K4L9I6/1289-1451      DE Polyprotein 1ab
#=GS K4L9I6/1289-1451      DR GENE3D; ba8410d9814a58864ad325aa5952a926/1289-1451; 
#=GS K4L9I6/1289-1451      DR ORG; Viruses; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; Porcine epidemic diarrhea virus; 
#=GF TC 378.2 1.2E-117
#=GF SQ 7
P0C6Y4/1289-1451              VVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANEKLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYGDKEREAIIKYMDG
P0C6V6/1289-1451              VVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANEKLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYGDKEREAIIKYMDG
A0A067YRM0/1281-1443          VVKPFYSYKNVDFYQGDFNDLVRLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDG
U6BPB2/1289-1451              VVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDG
A0A0N9DV71/394-556            VVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLEALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDG
R4JK63/1289-1451              VVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGPIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREATINYMDG
K4L9I6/1289-1451              VVKPFYSYKNVDFYQGDFSDLVKLPCDFVVNAANENLSHGGGIAKAIDVYTKGMLQKCSNDYIKAHGSIKVGRGVMLDALGLKVFNVVGPRKGKHAPELLVKAYKSVFANSGVALTPLISVGIFSVPLEESLSAFLACVGDRHCKCFCYSDKEREAIINYMDG
#=GC scorecons                9999999999999999997999799999999999969999999999999999999999999999999799999999979999999999999999999999999999999999999999999999999999999999999999999999969999997969999
#=GC scorecons_70             ***********************************_*****************************************************************************************************************_********_****
#=GC scorecons_80             ***********************************_*****************************************************************************************************************_********_****
#=GC scorecons_90             ******************_***_************_*******************************_*********_***********************************************************************_******_*_****
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