# STOCKHOLM 1.0 #=GF ID 3.40.190.10/FF/204155 #=GF DE Putative transcriptional regulator, LysR family #=GF AC 3.40.190.10/FF/204155 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 86.003 #=GS A0A1H1T017/94-166_268-285 AC A0A1H1T017 #=GS A0A1H1T017/94-166_268-285 OS Pseudomonas xinjiangensis #=GS A0A1H1T017/94-166_268-285 DE DNA-binding transcriptional regulator, LysR family #=GS A0A1H1T017/94-166_268-285 DR GENE3D; 0376b338900c8a9b54f59b89ef149faf/94-166_268-285; #=GS A0A1H1T017/94-166_268-285 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas xinjiangensis; #=GS A0A0T6UPJ2/94-166_266-284 AC A0A0T6UPJ2 #=GS A0A0T6UPJ2/94-166_266-284 OS Pseudomonas sp. TTU2014-080ASC #=GS A0A0T6UPJ2/94-166_266-284 DE LysR family transcriptional regulator #=GS A0A0T6UPJ2/94-166_266-284 DR GENE3D; 071f100fc316a492e65a44bc5dc7d0fa/94-166_266-284; #=GS A0A0T6UPJ2/94-166_266-284 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. TTU2014-080ASC; #=GS S6BL95/94-166_267-284 AC S6BL95 #=GS S6BL95/94-166_267-284 OS Pseudomonas resinovorans NBRC 106553 #=GS S6BL95/94-166_267-284 DE Putative LysR family transcriptional regulator #=GS S6BL95/94-166_267-284 DR GENE3D; 07d5140c498db619d36032629a6bad52/94-166_267-284; #=GS S6BL95/94-166_267-284 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas resinovorans; #=GS A0A0D6SSL4/94-166_268-287 AC A0A0D6SSL4 #=GS A0A0D6SSL4/94-166_268-287 OS Pseudomonas sp. FeS53a #=GS A0A0D6SSL4/94-166_268-287 DE LysR family transcriptional regulator #=GS A0A0D6SSL4/94-166_268-287 DR GENE3D; 12591dea852c363744520cf0dc7fd386/94-166_268-287; #=GS A0A0D6SSL4/94-166_268-287 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. FeS53a; #=GS U2BCY9/94-166_266-285 AC U2BCY9 #=GS U2BCY9/94-166_266-285 OS Pseudomonas sp. EGD-AK9 #=GS U2BCY9/94-166_266-285 DE LysR family transcriptional regulator #=GS U2BCY9/94-166_266-285 DR GENE3D; 2242139365895177425508a754be5cc1/94-166_266-285; #=GS U2BCY9/94-166_266-285 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. EGD-AK9; #=GS A0A127MVK8/94-166_271-288 AC A0A127MVK8 #=GS A0A127MVK8/94-166_271-288 OS Pseudomonas citronellolis #=GS A0A127MVK8/94-166_271-288 DE HTH-type transcriptional regulator GbpR #=GS A0A127MVK8/94-166_271-288 DR GENE3D; 3404f4616a82c2275c8a8849b0085be6/94-166_271-288; #=GS A0A127MVK8/94-166_271-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas citronellolis; #=GS A0A1G3E0P1/94-166_267-285 AC A0A1G3E0P1 #=GS A0A1G3E0P1/94-166_267-285 OS Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43 #=GS A0A1G3E0P1/94-166_267-285 DE LysR family transcriptional regulator #=GS A0A1G3E0P1/94-166_267-285 DR GENE3D; 405b9558ea3edd4ae2a7f8951a48bf17/94-166_267-285; #=GS A0A1G3E0P1/94-166_267-285 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43; #=GS P52686/94-166_268-287 AC P52686 #=GS P52686/94-166_268-287 OS Pseudomonas sp. ATCC19151 #=GS P52686/94-166_268-287 DE SDS degradation transcriptional activation protein #=GS P52686/94-166_268-287 DR GENE3D; 431ee45d6a39e6b1de7a36cd8494ca9d/94-166_268-287; #=GS P52686/94-166_268-287 DR ORG; Bacteria; Proteobacteria; Pseudomonas sp. ATCC19151; #=GS U3HDQ7/94-166_267-284 AC U3HDQ7 #=GS U3HDQ7/94-166_267-284 OS Pseudomonas alcaligenes OT 69 #=GS U3HDQ7/94-166_267-284 DE Uncharacterized protein #=GS U3HDQ7/94-166_267-284 DR GENE3D; 7b328c2d7e66194261008379d4308a25/94-166_267-284; #=GS U3HDQ7/94-166_267-284 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas alcaligenes; #=GS Q9I5J0/96-166_267-288 AC Q9I5J0 #=GS Q9I5J0/96-166_267-288 OS Pseudomonas aeruginosa PAO1 #=GS Q9I5J0/96-166_267-288 DE Probable transcriptional regulator #=GS Q9I5J0/96-166_267-288 DR GENE3D; 9ab8e2e0cc71eb4abb0e7be7555f0738/96-166_267-288; #=GS Q9I5J0/96-166_267-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A1B3EBH6/94-166_267-284 AC A0A1B3EBH6 #=GS A0A1B3EBH6/94-166_267-284 OS Pseudomonas sp. TCU-HL1 #=GS A0A1B3EBH6/94-166_267-284 DE LysR family transcriptional regulator #=GS A0A1B3EBH6/94-166_267-284 DR GENE3D; ab57d4977c57aff5b7e719330c93104e/94-166_267-284; #=GS A0A1B3EBH6/94-166_267-284 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. TCU-HL1; #=GS A0A0A8RIC7/94-166_271-288 AC A0A0A8RIC7 #=GS A0A0A8RIC7/94-166_271-288 OS Pseudomonas aeruginosa #=GS A0A0A8RIC7/94-166_271-288 DE SDS degradation transcriptional activation protein #=GS A0A0A8RIC7/94-166_271-288 DR GENE3D; c081c1e3c627ece7b11004135173eafe/94-166_271-288; #=GS A0A0A8RIC7/94-166_271-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; #=GS A0A0T7PSI9/55-104 AC A0A0T7PSI9 #=GS A0A0T7PSI9/55-104 OS Mycobacterium tuberculosis #=GS A0A0T7PSI9/55-104 DE LysR family transcriptional regulator #=GS A0A0T7PSI9/55-104 DR GENE3D; d616420bc1b5ce3215d13e27364c6f21/55-104; #=GS A0A0T7PSI9/55-104 DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; #=GS U3AVW9/93-166_266-283 AC U3AVW9 #=GS U3AVW9/93-166_266-283 OS Pseudomonas alcaligenes NBRC 14159 #=GS U3AVW9/93-166_266-283 DE Putative LysR family transcriptional regulator #=GS U3AVW9/93-166_266-283 DR GENE3D; d65dabba82a5f191a91872c4b150d8e3/93-166_266-283; #=GS U3AVW9/93-166_266-283 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas alcaligenes; #=GS A0A024HM54/94-166_271-287 AC A0A024HM54 #=GS A0A024HM54/94-166_271-287 OS Pseudomonas knackmussii B13 #=GS A0A024HM54/94-166_271-287 DE SDS degradation transcriptional activation protein #=GS A0A024HM54/94-166_271-287 DR GENE3D; d8c29cd59c1f154c95b9c5ecf9f509cc/94-166_271-287; #=GS A0A024HM54/94-166_271-287 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas knackmussii; #=GS M4WVG3/94-166_268-285 AC M4WVG3 #=GS M4WVG3/94-166_268-285 OS Pseudomonas denitrificans ATCC 13867 #=GS M4WVG3/94-166_268-285 DE Putative transcriptional regulator #=GS M4WVG3/94-166_268-285 DR GENE3D; f2f0d9f51ea817db630c82cef0d291da/94-166_268-285; #=GS M4WVG3/94-166_268-285 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas pertucinogena group; Pseudomonas denitrificans; #=GS W6QZY5/94-166_268-285 AC W6QZY5 #=GS W6QZY5/94-166_268-285 OS Pseudomonas pseudoalcaligenes CECT 5344 #=GS W6QZY5/94-166_268-285 DE LysR family transcriptional regulator #=GS W6QZY5/94-166_268-285 DR GENE3D; 8f019d416ca37706c4e718bb1586f810/94-166_268-285; #=GS W6QZY5/94-166_268-285 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas oleovorans/pseudoalcaligenes group; Pseudomonas pseudoalcaligenes; #=GS A0A061CU84/94-166_268-285 AC A0A061CU84 #=GS A0A061CU84/94-166_268-285 OS Pseudomonas pseudoalcaligenes #=GS A0A061CU84/94-166_268-285 DE LysR family transcriptional regulator #=GS A0A061CU84/94-166_268-285 DR GENE3D; 8f019d416ca37706c4e718bb1586f810/94-166_268-285; #=GS A0A061CU84/94-166_268-285 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas oleovorans/pseudoalcaligenes group; Pseudomonas pseudoalcaligenes; #=GS E4PMK1/84-156_259-275 AC E4PMK1 #=GS E4PMK1/84-156_259-275 OS Marinobacter adhaerens HP15 #=GS E4PMK1/84-156_259-275 DE Transcriptional regulator, LysR family #=GS E4PMK1/84-156_259-275 DR GENE3D; 8cbd112fc927764c0a76f111f7f1533f/84-156_259-275; #=GS E4PMK1/84-156_259-275 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter; Marinobacter adhaerens; #=GS Q4KK78/93-165_271-288 AC Q4KK78 #=GS Q4KK78/93-165_271-288 OS Pseudomonas protegens Pf-5 #=GS Q4KK78/93-165_271-288 DE Transcriptional regulator SftR-related protein #=GS Q4KK78/93-165_271-288 DR GENE3D; 94fbc22ba8d93f1fdffba636e34fbdc9/93-165_271-288; #=GS Q4KK78/93-165_271-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas protegens; #=GS A0A1K2BBE6/93-165_271-288 AC A0A1K2BBE6 #=GS A0A1K2BBE6/93-165_271-288 OS Pseudomonas sp. NFPP09 #=GS A0A1K2BBE6/93-165_271-288 DE Transcriptional regulator, LysR family #=GS A0A1K2BBE6/93-165_271-288 DR GENE3D; 94fbc22ba8d93f1fdffba636e34fbdc9/93-165_271-288; #=GS A0A1K2BBE6/93-165_271-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. NFPP09; #=GS A0A1K2CNX0/93-165_271-288 AC A0A1K2CNX0 #=GS A0A1K2CNX0/93-165_271-288 OS Pseudomonas sp. NFPP14 #=GS A0A1K2CNX0/93-165_271-288 DE Transcriptional regulator, LysR family #=GS A0A1K2CNX0/93-165_271-288 DR GENE3D; 94fbc22ba8d93f1fdffba636e34fbdc9/93-165_271-288; #=GS A0A1K2CNX0/93-165_271-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. NFPP14; #=GS A0A1K2ABL2/93-165_271-288 AC A0A1K2ABL2 #=GS A0A1K2ABL2/93-165_271-288 OS Pseudomonas sp. NFPP16 #=GS A0A1K2ABL2/93-165_271-288 DE Transcriptional regulator, LysR family #=GS A0A1K2ABL2/93-165_271-288 DR GENE3D; 94fbc22ba8d93f1fdffba636e34fbdc9/93-165_271-288; #=GS A0A1K2ABL2/93-165_271-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. NFPP16; #=GS S6KM06/93-165_271-288 AC S6KM06 #=GS S6KM06/93-165_271-288 OS Pseudomonas sp. CF161 #=GS S6KM06/93-165_271-288 DE LysR family transcriptional regulator #=GS S6KM06/93-165_271-288 DR GENE3D; 710eb99dfffaf69376bb9fa8f671acf5/93-165_271-288; #=GS S6KM06/93-165_271-288 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. CF161; #=GS A4XS17/94-166_266-285 AC A4XS17 #=GS A4XS17/94-166_266-285 OS Pseudomonas mendocina ymp #=GS A4XS17/94-166_266-285 DE Transcriptional regulator, LysR family #=GS A4XS17/94-166_266-285 DR GENE3D; e5e227e7b2ad01a8fb2f713ba8790c40/94-166_266-285; #=GS A4XS17/94-166_266-285 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas mendocina; #=GF TC 132.4 4.1E-42 #=GF SQ 25 A0A1H1T017/94-166_268-285 ------------IRIGAGPFPAAALVPRALARLLGDYPKLQVEVVVESWEALHQRLLDEDIELFVADIRELRDDPQLSVEPLPVH----SAYGLVSRQGRQLSPAAQ A0A0T6UPJ2/94-166_266-284 ------------LRLGSGPYPAARLIPNAIGRMAKRYPRVRIKLQINNWLELRDLLLDDALELFVADSRELLDDPQLKVEPLRPY---YSAYALISRAGRSLSPAAQ S6BL95/94-166_267-284 ------------LRLGAGPYPAARLVPRALGRFASRHPGVRVQLSLENWHSLHQRLLDDAIELFVADIRELADDPLLDITPLRRH----SAYGVVSHAARSLSPAAR A0A0D6SSL4/94-166_268-287 ------------LRLGAGPYPAARLVPRALGRFAGAHPGVRVQLAIDTWYSLHQRLLDDALELFVADVRELRDDPQLEVTPLRSW--QRSAYGLVSRAGRTLSPAAE U2BCY9/94-166_266-285 ------------LRLGAGPYPAARLVPQAVGRLLQRYPRVQVRLEIGNWLELRERLLEAGVELFVADVRELQDDPQLQIEALQTH--QQSAYGLVSRAGHSLSPAAQ A0A127MVK8/94-166_271-288 ------------LRLGAGPFPAARLLPQTLAAFSRAHPRVSVALAIENWQLLHRRLLDDELELFVADCRELQGDPRLDIQPLREH----SAYGLVRHASRSLSPAAQ A0A1G3E0P1/94-166_267-285 ------------LRLGAGPYPAARLIPRAVGRMALRYPRVRVNLQISNWLDLRSSLLDDALELFVADSRELIGDPLLCIEPLQRH---QSAYALISRAGHSLSPAAQ P52686/94-166_268-287 ------------LRLGAGPYPGARLVPRALGRFAGAHPGVRVQLAIDTWYSLHQRLLDDALELFVADVRELRDDPQLEVTPLRSW--QRSAYGLVSRAGRTLSPAAE U3HDQ7/94-166_267-284 ------------LRLGAGPYPAARLVPRTLGRFAGAHPGVQVQLRIEDWHSLRSQLLGDAIELFVADVREFEGDPLLHITPLRRH----SAYGIVSHAGRSLSPAAR Q9I5J0/96-166_267-288 --------------LGGGPFPAARLLPEALAGFSSAHPRVRVVLLIEDWQTLRQRLLDDAVELFVADIRELQGDPQLRIHPLREYRAKGSAYGLVSRAGRSLSPAAA A0A1B3EBH6/94-166_267-284 ------------LRLGAGPYPAARLVPHALGRFASQHPGVRVQLCLENWHTLRQRLLDDAIELFVADVREFDGDPMLDIVPLRRH----SAYGVVSHAARSLSPAAR A0A0A8RIC7/94-166_271-288 ------------LRLGGGPFPAARLLPEALAGFSSAHPRVRVVLLIEDWQTLRQRLLDDAVELFVADIRELQGDPQLRIHPLREY----SAYGLVSRAGRSLSPAAA A0A0T7PSI9/55-104 EVDAVRSGITGTLRLGTVP-TASTTASLVLSAFCSAHPLAKVQVC--------------------------------------------SRLAAT------------ U3AVW9/93-166_266-283 E-----------VRLGAGPYPAARRVPQAMGSFAERFPRVRLHLLIDNWQQLRRRLLDDEIELFVADIREFEGDPQLHIEPLRVH---HSAYGIVSRAGHSLSPGA- A0A024HM54/94-166_271-287 ------------LRLGSGPFPAARLMPQVLAAFSRAHPKVSLVLSIENWGELHQRLLDDELELFVADCRELMDDPRLDILPLREH----SAYGLVRHASRSLSPAA- M4WVG3/94-166_268-285 ------------LRLGAGPFPAARLMPQVLARYSSAHPRVSILLSIENWIELHQRLLDDELELFIADYRELEGDSRLDILPLRVH---GSAYALVRHASRSLSPAA- W6QZY5/94-166_268-285 ------------LRLGAGPYPAARLIPQALGQLLQRYPRVQVKLDIANWLELRDSLLDSTIELFVADIRELQDDAQLRIEPLRVH----SAYGLVSRAGHSLSPAAQ A0A061CU84/94-166_268-285 ------------LRLGAGPYPAARLIPQALGQLLQRYPRVQVKLDIANWLELRDSLLDSTIELFVADIRELQDDAQLRIEPLRVH----SAYGLVSRAGHSLSPAAQ E4PMK1/84-156_259-275 ------------LSIGTGPYPALALMDKVCARFVDQYPGIRLNIRTDNWQDLRLALLDHEIELFVADTGELSGDPDLDITHLPQP----TRYGVLQRCGRPLSPAA- Q4KK78/93-165_271-288 ------------VRFGCGPAPAVKLVPDAVAQFTSAHPKVRTCFAVDNWEKLSRSLNREEIEFFIADIRHFEADPNYQTQPLTPK----ARCGIVSRSGFRLSPAAR A0A1K2BBE6/93-165_271-288 ------------VRFGCGPAPAVKLVPDAVAQFTSAHPKVRTCFAVDNWEKLSRSLNREEIEFFIADIRHFEADPNYQTQPLTPK----ARCGIVSRSGFRLSPAAR A0A1K2CNX0/93-165_271-288 ------------VRFGCGPAPAVKLVPDAVAQFTSAHPKVRTCFAVDNWEKLSRSLNREEIEFFIADIRHFEADPNYQTQPLTPK----ARCGIVSRSGFRLSPAAR A0A1K2ABL2/93-165_271-288 ------------VRFGCGPAPAVKLVPDAVAQFTSAHPKVRTCFAVDNWEKLSRSLNREEIEFFIADIRHFEADPNYQTQPLTPK----ARCGIVSRSGFRLSPAAR S6KM06/93-165_271-288 ------------LRFGCGPAPAVKLVPDALAQFTSAHPKVRICLEVDNWEKLSRSLSREEIEFFIADIRHFEADPNFQTQALTPK----ARCGIVSRTGFRLSPAAR A4XS17/94-166_266-285 ------------LRLGAGPYPAARLIPQALGQLLQRYPRVQVKLDIGNWLELRDSLLDSAIELFVADIRELQGDTQLQIEPLRVH--QQSAYGLVSRAGHSLSPAAQ #=GC scorecons 00000000000067694794785575736654634579475536354572374337444457576774655347635353674230000656757554534777672 #=GC scorecons_70 ____________****_**_**__*_*_*___*___**_*________*__*___*_____*_*_**_*____*_______*_______*__*_*______*****_ #=GC scorecons_80 _____________*_*_**_**__*_*__________*_*________*__*___*_____*_*_**______*_______*___________________***_*_ #=GC scorecons_90 _______________*__*__*_______________*_____________________________________________________________________ //