# STOCKHOLM 1.0
#=GF ID 3.40.190.10/FF/203931
#=GF DE Periplasmic substrate binding protein family 3
#=GF AC 3.40.190.10/FF/203931
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 92.935
#=GS Q8EEE8/30-113_210-246      AC Q8EEE8
#=GS Q8EEE8/30-113_210-246      OS Shewanella oneidensis MR-1
#=GS Q8EEE8/30-113_210-246      DE Bifunctional periplasmic substrate binding protein/cytoplasmic diguanylate cyclase
#=GS Q8EEE8/30-113_210-246      DR GENE3D; 76e7010024b1165715d97c6c084bc13a/30-113_210-246; 
#=GS Q8EEE8/30-113_210-246      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella oneidensis; 
#=GS Q8EEE8/30-113_210-246      DR GO; GO:0006810; 
#=GS Q8EEE8/30-113_210-246      DR EC; 2.7.7.65; 
#=GS Q8EGT8/41-110_208-245      AC Q8EGT8
#=GS Q8EGT8/41-110_208-245      OS Shewanella oneidensis MR-1
#=GS Q8EGT8/41-110_208-245      DE Periplasmic substrate binding protein family 3
#=GS Q8EGT8/41-110_208-245      DR GENE3D; 5076d02dee732544e9cec97c9831254b/41-110_208-245; 
#=GS Q8EGT8/41-110_208-245      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella oneidensis; 
#=GS Q8EGT8/41-110_208-245      DR GO; GO:0006810; GO:0042626; 
#=GS Q8EKN6/27-110_205-241      AC Q8EKN6
#=GS Q8EKN6/27-110_205-241      OS Shewanella oneidensis MR-1
#=GS Q8EKN6/27-110_205-241      DE ABC-type transport system substrate binding component
#=GS Q8EKN6/27-110_205-241      DR GENE3D; 83944de7e4f0c2f092df5b3cd1b35126/27-110_205-241; 
#=GS Q8EKN6/27-110_205-241      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella; Shewanella oneidensis; 
#=GS Q8EKN6/27-110_205-241      DR GO; GO:0005215; GO:0006810; 
#=GS Q9KKX2/29-103_200-240      AC Q9KKX2
#=GS Q9KKX2/29-103_200-240      OS Vibrio cholerae O1 biovar El Tor str. N16961
#=GS Q9KKX2/29-103_200-240      DE Amino acid ABC transporter, periplasmic amino acid-binding protein, putative
#=GS Q9KKX2/29-103_200-240      DR GENE3D; d56105f16730987f8430a7313d0dab77/29-103_200-240; 
#=GS Q9KKX2/29-103_200-240      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS Q9KKX2/29-103_200-240      DR GO; GO:0006865; GO:0015424; 
#=GS Q5LP13/28-108_205-234      AC Q5LP13
#=GS Q5LP13/28-108_205-234      OS Ruegeria pomeroyi DSS-3
#=GS Q5LP13/28-108_205-234      DE Polar amino acid uptake family ABC transporter, periplasmic substrate-binding protein, putative
#=GS Q5LP13/28-108_205-234      DR GENE3D; 0e759b2aae0193473edcd1ebc978c5ac/28-108_205-234; 
#=GS Q5LP13/28-108_205-234      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria pomeroyi; 
#=GS Q5LP13/28-108_205-234      DR GO; GO:0006865; GO:0016597; GO:0030288; GO:0042626; 
#=GS A0A1L9L0H1/28-102_202-239  AC A0A1L9L0H1
#=GS A0A1L9L0H1/28-102_202-239  OS Vibrio fluvialis
#=GS A0A1L9L0H1/28-102_202-239  DE Lysine-arginine-ornithine-binding periplasmic protein
#=GS A0A1L9L0H1/28-102_202-239  DR GENE3D; c9edefd9a9352e4c2f08afe4d47616f2/28-102_202-239; 
#=GS A0A1L9L0H1/28-102_202-239  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio fluvialis; 
#=GS A0A1L9IRJ0/28-102_202-239  AC A0A1L9IRJ0
#=GS A0A1L9IRJ0/28-102_202-239  OS Vibrio vulnificus
#=GS A0A1L9IRJ0/28-102_202-239  DE Lysine-arginine-ornithine-binding periplasmic protein
#=GS A0A1L9IRJ0/28-102_202-239  DR GENE3D; c9edefd9a9352e4c2f08afe4d47616f2/28-102_202-239; 
#=GS A0A1L9IRJ0/28-102_202-239  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio vulnificus; 
#=GS Q7MCU5/28-102_202-239      AC Q7MCU5
#=GS Q7MCU5/28-102_202-239      OS Vibrio vulnificus YJ016
#=GS Q7MCU5/28-102_202-239      DE Putative amino acid ABC transporter, periplasmic amino acid-binding protein
#=GS Q7MCU5/28-102_202-239      DR GENE3D; caa6cd6beb8a4e605bb2e88e2451f56a/28-102_202-239; 
#=GS Q7MCU5/28-102_202-239      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio vulnificus; 
#=GS A0A0X1L176/29-103_200-240  AC A0A0X1L176
#=GS A0A0X1L176/29-103_200-240  OS Vibrio cholerae MO10
#=GS A0A0X1L176/29-103_200-240  DE ABC-type amino acid transport/signal transduction system
#=GS A0A0X1L176/29-103_200-240  DR GENE3D; d56105f16730987f8430a7313d0dab77/29-103_200-240; 
#=GS A0A0X1L176/29-103_200-240  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3Q2J6/29-103_200-240  AC A0A0H3Q2J6
#=GS A0A0H3Q2J6/29-103_200-240  OS Vibrio cholerae B33
#=GS A0A0H3Q2J6/29-103_200-240  DE Uncharacterized protein
#=GS A0A0H3Q2J6/29-103_200-240  DR GENE3D; d56105f16730987f8430a7313d0dab77/29-103_200-240; 
#=GS A0A0H3Q2J6/29-103_200-240  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0K9UVL9/29-103_200-240  AC A0A0K9UVL9
#=GS A0A0K9UVL9/29-103_200-240  OS Vibrio cholerae 2740-80
#=GS A0A0K9UVL9/29-103_200-240  DE Polar amino acid transport system substrate-binding protein
#=GS A0A0K9UVL9/29-103_200-240  DR GENE3D; d56105f16730987f8430a7313d0dab77/29-103_200-240; 
#=GS A0A0K9UVL9/29-103_200-240  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS C3LWP2/29-103_200-240      AC C3LWP2
#=GS C3LWP2/29-103_200-240      OS Vibrio cholerae M66-2
#=GS C3LWP2/29-103_200-240      DE Putative amino acid ABC transporter, periplasmic amino acid-binding protein
#=GS C3LWP2/29-103_200-240      DR GENE3D; d56105f16730987f8430a7313d0dab77/29-103_200-240; 
#=GS C3LWP2/29-103_200-240      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3AG92/29-103_200-240  AC A0A0H3AG92
#=GS A0A0H3AG92/29-103_200-240  OS Vibrio cholerae O395
#=GS A0A0H3AG92/29-103_200-240  DE Putative amino acid ABC transporter, periplasmic amino acid-binding protein
#=GS A0A0H3AG92/29-103_200-240  DR GENE3D; d56105f16730987f8430a7313d0dab77/29-103_200-240; 
#=GS A0A0H3AG92/29-103_200-240  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H7DHC9/29-103_200-240  AC A0A0H7DHC9
#=GS A0A0H7DHC9/29-103_200-240  OS Vibrio cholerae
#=GS A0A0H7DHC9/29-103_200-240  DE Amino acid ABC transporter substrate-binding protein
#=GS A0A0H7DHC9/29-103_200-240  DR GENE3D; d56105f16730987f8430a7313d0dab77/29-103_200-240; 
#=GS A0A0H7DHC9/29-103_200-240  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0F2IS16/28-102_202-239  AC A0A0F2IS16
#=GS A0A0F2IS16/28-102_202-239  OS Vibrio sp. S234-5
#=GS A0A0F2IS16/28-102_202-239  DE Amino acid ABC transporter substrate-binding protein
#=GS A0A0F2IS16/28-102_202-239  DR GENE3D; fda5da23606a050985d30af19e5ac5dc/28-102_202-239; 
#=GS A0A0F2IS16/28-102_202-239  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio sp. S234-5; 
#=GS E8LWX8/28-102_202-239      AC E8LWX8
#=GS E8LWX8/28-102_202-239      OS Vibrio brasiliensis LMG 20546
#=GS E8LWX8/28-102_202-239      DE Putative amino acid ABC transporter, periplasmic amino acid-binding protein
#=GS E8LWX8/28-102_202-239      DR GENE3D; ee31cfe3489aae8c37b9f7ac64e489a1/28-102_202-239; 
#=GS E8LWX8/28-102_202-239      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio oreintalis group; Vibrio brasiliensis; 
#=GF TC 166.3 3.5E-53
#=GF SQ 16
Q8EEE8/30-113_210-246              LIVVMGEDSFPYQFVD-NDGEATGLLVDLWKEWGKRTHTPLVFVARHWNESLAQLQQGKAQVHIGMGKTPE-REQRFDFA-DAI--------------ANVMQFVPAVMKGNTELLNKIKAGFNGFDPKFIQQTERRW
Q8EGT8/41-110_208-245              -------------Q---SNGEYTGLGVDILNRFAKQQQVTIHYQITPWRRAQSMVERGQADILIGPYVSEE-RQKRLAFSAQPFYRDQDGFMAFPKS-TQFQALKQNFDHF----MQHMIQ--SGELATLAK------
Q8EKN6/27-110_205-241              --IGAEDDWAPYCALDKQSGQPLGLAPELVKAVFATEKLEIAFRPLPFARCMHDAKSGKVVGCFNATITEENRNQYYWHK-TPMFEEDGFWLAFSRTHPQGEAMSKQFEEG----LQKIKN--NGTYELL--------
Q9KKX2/29-103_200-240              -------PWPPFVM---ENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE-RTAYLTYS-DNYLTNNPLHVTSGKANPRSEELVAAFNKG----LAEIKA--NGTFDKLLA----DY
Q5LP13/28-108_205-234              --VGSMEGFAPFNY--SINGEYSGIDVQILNEAAERIGVTLDHRPLPWKRALLDFETGQLDAVFQLAPTPE-RFQKWNMV-GPLRRTHARYIGFHRT-PEGDDMARRLQAE----LERMQA--N--------------
A0A1L9L0H1/28-102_202-239          -------PWAPFVQ---QNNANPGISVEIVIEAFKTQGHDVDFKIMPWTRALNEVKDGRVDVLVATWFTQE-RTSYLNYS-QPYLEN---HVTSGLANAKNGEIIEAFNKG----LAEIKA--NGTFDKILM----KY
A0A1L9IRJ0/28-102_202-239          -------PWAPFVQ---QNNANPGISVEIVIEAFKTQGHDVDFKIMPWTRALNEVKDGRVDVLVATWFTQE-RTSYLNYS-QPYLEN---HVTSGLANAKNGEIIEAFNKG----LAEIKA--NGTFDKILM----KY
Q7MCU5/28-102_202-239              -------PWAPFVQ---QNNANPGISVEIVIEAFKTQGHDVDFKIMPWTRALNEVKDGRVDVLVATWFTQE-RTSYLNYS-QPYLEN---HVTSGLANAKNGEIIEAFNKG----LAEIKA--NGTFDKILM----KY
A0A0X1L176/29-103_200-240          -------PWPPFVM---ENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE-RTAYLTYS-DNYLTNNPLHVTSGKANPRSEELVAAFNKG----LAEIKA--NGTFDKLLA----DY
A0A0H3Q2J6/29-103_200-240          -------PWPPFVM---ENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE-RTAYLTYS-DNYLTNNPLHVTSGKANPRSEELVAAFNKG----LAEIKA--NGTFDKLLA----DY
A0A0K9UVL9/29-103_200-240          -------PWPPFVM---ENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE-RTAYLTYS-DNYLTNNPLHVTSGKANPRSEELVAAFNKG----LAEIKA--NGTFDKLLA----DY
C3LWP2/29-103_200-240              -------PWPPFVM---ENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE-RTAYLTYS-DNYLTNNPLHVTSGKANPRSEELVAAFNKG----LAEIKA--NGTFDKLLA----DY
A0A0H3AG92/29-103_200-240          -------PWPPFVM---ENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE-RTAYLTYS-DNYLTNNPLHVTSGKANPRSEELVAAFNKG----LAEIKA--NGTFDKLLA----DY
A0A0H7DHC9/29-103_200-240          -------PWPPFVM---ENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQE-RTAYLTYS-DNYLTNNPLHVTSGKANPRSEELVAAFNKG----LAEIKA--NGTFDKLLA----DY
A0A0F2IS16/28-102_202-239          -------PWPPFVQ---QDNMNKGISVEIVTEAFKTQGYDVDFKIMPWTRALTDVKEGRVDVLVATWFTQE-RTSYLNYS-QPYLEN---HVTSGVANARNGEIIAAFNKG----LAEIKA--NGTFDNILR----KY
E8LWX8/28-102_202-239              -------PWAPFVQ---KDNANPGVSVEIITEAFKTQGHSVDFKIMPWTRALNEVKSGKVDVLVATWFTSE-RTAFLKYS-EPYLEN---HVTSGLANPNNGQYIEAFNKG----LAEIKA--NGTFDKILA----KY
#=GC scorecons                     000000044376330003644339647675444445553464735577476645564965655455347490944453550454334111444443435434554356456000084576600774444432000023
#=GC scorecons_70                  __________*_______*____**_***_____________*___**_***_____**_________*_*_*__________________________________*_______*__***__**_____________
#=GC scorecons_80                  _______________________*__*_*_____________*___**_*_______*__________*_*_*__________________________________________*__*____*______________
#=GC scorecons_90                  _______________________*_________________________________*____________*_*__________________________________________*______________________
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