# STOCKHOLM 1.0
#=GF ID 3.40.190.10/FF/203839
#=GF DE LysR family transcriptional regulator
#=GF AC 3.40.190.10/FF/203839
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 65.786
#=GS A4N0B9/60-163       AC A4N0B9
#=GS A4N0B9/60-163       OS Haemophilus influenzae 22.1-21
#=GS A4N0B9/60-163       DE DNA topoisomerase I
#=GS A4N0B9/60-163       DR GENE3D; 3268b3727f594c77dd9de72cb959cc40/60-163; 
#=GS A4N0B9/60-163       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae; 
#=GS A4N0B9/60-163       DR EC; 5.99.1.2; 
#=GS A0A121XXL0/163-263  AC A0A121XXL0
#=GS A0A121XXL0/163-263  OS Haemophilus influenzae
#=GS A0A121XXL0/163-263  DE HTH-type transcriptional regulator
#=GS A0A121XXL0/163-263  DR GENE3D; 3f89c73d1353e49dab0e1b194da6de16/163-263; 
#=GS A0A121XXL0/163-263  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae; 
#=GS A0A121XXL0/163-263  DR EC; 5.99.1.2; 
#=GS A0A0H3PMP1/163-263  AC A0A0H3PMP1
#=GS A0A0H3PMP1/163-263  OS Haemophilus influenzae 3655
#=GS A0A0H3PMP1/163-263  DE DNA topoisomerase I
#=GS A0A0H3PMP1/163-263  DR GENE3D; 3f89c73d1353e49dab0e1b194da6de16/163-263; 
#=GS A0A0H3PMP1/163-263  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae; 
#=GS A0A0H3PMP1/163-263  DR EC; 5.99.1.2; 
#=GS A4N5H7/163-263      AC A4N5H7
#=GS A4N5H7/163-263      OS Haemophilus influenzae R3021
#=GS A4N5H7/163-263      DE DNA topoisomerase I
#=GS A4N5H7/163-263      DR GENE3D; 5ebe98e70e7ff08a712eb94b1f21b22b/163-263; 
#=GS A4N5H7/163-263      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae; 
#=GS A4N5H7/163-263      DR EC; 5.99.1.2; 
#=GS A0A0E1SNN9/163-263  AC A0A0E1SNN9
#=GS A0A0E1SNN9/163-263  OS Haemophilus influenzae PittII
#=GS A0A0E1SNN9/163-263  DE DNA topoisomerase I
#=GS A0A0E1SNN9/163-263  DR GENE3D; 7270a612a66804c20c0a6550683983e7/163-263; 
#=GS A0A0E1SNN9/163-263  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae; 
#=GS A0A0E1SNN9/163-263  DR EC; 5.99.1.2; 
#=GS P43011/163-263      AC P43011
#=GS P43011/163-263      OS Haemophilus influenzae Rd KW20
#=GS P43011/163-263      DE Uncharacterized HTH-type transcriptional regulator HI_1364
#=GS P43011/163-263      DR GENE3D; 3e1bdfc148668fdd8a26b78e5420994a/163-263; 
#=GS P43011/163-263      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae; 
#=GS A0A146TFE9/1-92     AC A0A146TFE9
#=GS A0A146TFE9/1-92     OS Fundulus heteroclitus
#=GS A0A146TFE9/1-92     DE The C-terminal substrate binding domain of an
#=GS A0A146TFE9/1-92     DR GENE3D; 96f5ca3db693f102fb4e2c64e13364b3/1-92; 
#=GS A0A146TFE9/1-92     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GS A0A146QAS2/1-99     AC A0A146QAS2
#=GS A0A146QAS2/1-99     OS Fundulus heteroclitus
#=GS A0A146QAS2/1-99     DE LysR-family transcriptional regulator
#=GS A0A146QAS2/1-99     DR GENE3D; e8e4a779504bba7e080048d2322397a3/1-99; 
#=GS A0A146QAS2/1-99     DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; 
#=GS F9H5P9/163-263      AC F9H5P9
#=GS F9H5P9/163-263      OS Haemophilus haemolyticus M21639
#=GS F9H5P9/163-263      DE Putative winged helix-turn-helix transcription repressor DNA-binding protein
#=GS F9H5P9/163-263      DR GENE3D; 60fc8b21572ced5e0f9cb16d1e4ceca3/163-263; 
#=GS F9H5P9/163-263      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus haemolyticus; 
#=GS A0A1B3JKC0/163-263  AC A0A1B3JKC0
#=GS A0A1B3JKC0/163-263  OS Pasteurellaceae bacterium NI1060
#=GS A0A1B3JKC0/163-263  DE Transcriptional regulator
#=GS A0A1B3JKC0/163-263  DR GENE3D; fccad0d12c40b45fd7273a807163a50a/163-263; 
#=GS A0A1B3JKC0/163-263  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurellaceae bacterium NI1060; 
#=GF TC 227.7 2.5E-72
#=GF SQ 10
A4N0B9/60-163               GTTTVHFAASPNYLETNGIPQTPDDLEHHNGLLYKNAM--NQVNWVGSRINQTQRFKIQSKVVSNSGFALLNMAKAGLGIANLPKFILGRAFEKGELIEILPEYKQ-
A0A121XXL0/163-263          ----VHFAASPNYLETNGIPQTPDDLEHHNGLLYKNAM--NQVNWVGSRINQTQRFKIQSKVVSNSGFALLNMAKAGLGIANLPKFILGRAFEKGELIEILPEYKQQ
A0A0H3PMP1/163-263          ----VHFAASPNYLETNGIPQTPDDLEHHNGLLYKNAM--NQVNWVGSRINQTQRFKIQSKVVSNSGFALLNMAKAGLGIANLPKFILGRAFEKGELIEILPEYKQQ
A4N5H7/163-263              ----VHFVASPNYLEANGIPQTPDDLEHHNGLLYKNSM--NQVNWVGSRINQTQRFKIQSKVVSNSGFALLNMAKAGLGIANLPKFILGSAFEKGELIELLPEYKQQ
A0A0E1SNN9/163-263          ----VHFAASPNYLETNGIPQTPDDLEHHNGLLYKNAM--NQVNWVGSRINQTQRFKIQSKVVSNSGFALLNMAKAGLGIANLPKFILGSAFEKGELIELLPEYKQQ
P43011/163-263              ----VHFAASPNYLETNGIPQTPDDLEHHNGLLYKNAM--NQVNWVGSRINQTQRFKIQSKVVSNSGFALLNMAKAGLGIANLPKFILGRAFEKGELIEILPEYKQQ
A0A146TFE9/1-92             ----MVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRXXX-----------
A0A146QAS2/1-99             ----MVNCASPHYLTRFGYPQSPDDLTSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLTAGLAGLGIIQIPRIAVREALRAGRLIEVXXX----
F9H5P9/163-263              ----LHFVASPSYLEANGIPQTPDDLEHHNGLLYKNVM--NQVNWVGSRINQTQRFKIQSKVVSNSGLALLEMAKAGLGIVNLPRFIIGQSLEKGELIEILPEYKQQ
A0A1B3JKC0/163-263          ----IHFAASPRYLERYGMPTTPNDLEHHEGLLYKSTL--NQVNWQGARPNQTQRFKIKSKVVSNNGLALLDMAKAGLGIVNLPRFILADAFESGELVEILPEYKQQ
#=GC scorecons              00005444999499544949769899559546495436006565545555955959954656559763559456499999556975555486535354533333332
#=GC scorecons_70           ________***_**___*_**_****__*__*_*___*____*_______*__*_**____*__**____*____*****__***_____*________________
#=GC scorecons_80           ________***_**___*_**_****__*____*________________*__*_**_______**____*____*****___*______*________________
#=GC scorecons_90           ________***_**___*_*__*_**__*____*________________*__*_**_______*_____*____*****___*_______________________
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