# STOCKHOLM 1.0
#=GF ID 3.40.190.10/FF/202597
#=GF DE HTH-type transcriptional regulator CatR
#=GF AC 3.40.190.10/FF/202597
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 35.699
#=GS Q88GK5/93-160_265-287      AC Q88GK5
#=GS Q88GK5/93-160_265-287      OS Pseudomonas putida KT2440
#=GS Q88GK5/93-160_265-287      DE HTH-type transcriptional regulator
#=GS Q88GK5/93-160_265-287      DR GENE3D; 1f3c8125a9ff4e47bb18106db6f08923/93-160_265-287; 
#=GS Q88GK5/93-160_265-287      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS Q88GK5/93-160_265-287      DR GO; GO:0000976; GO:0001216; GO:0032993; GO:0045893; 
#=GS V6AEH9/94-160_265-284      AC V6AEH9
#=GS V6AEH9/94-160_265-284      OS Pseudomonas aeruginosa MH27
#=GS V6AEH9/94-160_265-284      DE HTH-type transcriptional regulator CatR
#=GS V6AEH9/94-160_265-284      DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS V6AEH9/94-160_265-284      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0H3R8Z9/94-160_265-284  AC A0A0H3R8Z9
#=GS A0A0H3R8Z9/94-160_265-284  OS Pseudomonas aeruginosa str. Stone 130
#=GS A0A0H3R8Z9/94-160_265-284  DE Uncharacterized protein
#=GS A0A0H3R8Z9/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A0H3R8Z9/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A081HGL9/94-160_265-284  AC A0A081HGL9
#=GS A0A081HGL9/94-160_265-284  OS Pseudomonas aeruginosa
#=GS A0A081HGL9/94-160_265-284  DE Ben and cat operon transcriptional regulator
#=GS A0A081HGL9/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A081HGL9/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS Q79T09/94-160_265-284      AC Q79T09
#=GS Q79T09/94-160_265-284      OS Pseudomonas putida
#=GS Q79T09/94-160_265-284      DE Putative transcriptional regulatory protein CatR
#=GS Q79T09/94-160_265-284      DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS Q79T09/94-160_265-284      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A1D5BZS5/94-160_265-284  AC A0A1D5BZS5
#=GS A0A1D5BZS5/94-160_265-284  OS Pseudomonas sp. P179
#=GS A0A1D5BZS5/94-160_265-284  DE Uncharacterized protein
#=GS A0A1D5BZS5/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A1D5BZS5/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. P179; 
#=GS A0A1E9D3N0/94-160_265-284  AC A0A1E9D3N0
#=GS A0A1E9D3N0/94-160_265-284  OS Pseudomonas sp. HMSC066B11
#=GS A0A1E9D3N0/94-160_265-284  DE Transcriptional regulator
#=GS A0A1E9D3N0/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A1E9D3N0/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC066B11; 
#=GS A0A157WR98/94-160_265-284  AC A0A157WR98
#=GS A0A157WR98/94-160_265-284  OS Enterobacter cloacae
#=GS A0A157WR98/94-160_265-284  DE LysR family transcriptional regulator
#=GS A0A157WR98/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A157WR98/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; 
#=GS W1MHQ1/94-160_265-284      AC W1MHQ1
#=GS W1MHQ1/94-160_265-284      OS Pseudomonas aeruginosa VRFPA03
#=GS W1MHQ1/94-160_265-284      DE LysR family transcriptional regulator
#=GS W1MHQ1/94-160_265-284      DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS W1MHQ1/94-160_265-284      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0E1AUA8/94-160_265-284  AC A0A0E1AUA8
#=GS A0A0E1AUA8/94-160_265-284  OS Pseudomonas aeruginosa MTB-1
#=GS A0A0E1AUA8/94-160_265-284  DE LysR family transcriptional regulator
#=GS A0A0E1AUA8/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A0E1AUA8/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0H2ZBR0/94-160_265-284  AC A0A0H2ZBR0
#=GS A0A0H2ZBR0/94-160_265-284  OS Pseudomonas aeruginosa UCBPP-PA14
#=GS A0A0H2ZBR0/94-160_265-284  DE Transcriptional regulator CatR
#=GS A0A0H2ZBR0/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A0H2ZBR0/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1C7BHL7/94-160_265-284  AC A0A1C7BHL7
#=GS A0A1C7BHL7/94-160_265-284  OS Pseudomonas aeruginosa BL04
#=GS A0A1C7BHL7/94-160_265-284  DE Transcriptional regulator CatR
#=GS A0A1C7BHL7/94-160_265-284  DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS A0A1C7BHL7/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS Q9I0X2/94-160_265-284      AC Q9I0X2
#=GS Q9I0X2/94-160_265-284      OS Pseudomonas aeruginosa PAO1
#=GS Q9I0X2/94-160_265-284      DE Transcriptional regulator CatR
#=GS Q9I0X2/94-160_265-284      DR GENE3D; 86590bb891f63361d905949bc28225c7/94-160_265-284; 
#=GS Q9I0X2/94-160_265-284      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A6V4V3/94-160_265-284      AC A6V4V3
#=GS A6V4V3/94-160_265-284      OS Pseudomonas aeruginosa PA7
#=GS A6V4V3/94-160_265-284      DE Transcriptional regulator CatR
#=GS A6V4V3/94-160_265-284      DR GENE3D; 761a0ac353c97acbf10d99ce9e327cb2/94-160_265-284; 
#=GS A6V4V3/94-160_265-284      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0V2QHF7/94-160_265-284  AC A0A0V2QHF7
#=GS A0A0V2QHF7/94-160_265-284  OS Pseudomonas aeruginosa
#=GS A0A0V2QHF7/94-160_265-284  DE Transcriptional regulator
#=GS A0A0V2QHF7/94-160_265-284  DR GENE3D; 761a0ac353c97acbf10d99ce9e327cb2/94-160_265-284; 
#=GS A0A0V2QHF7/94-160_265-284  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS P20667/92-159_264-286      AC P20667
#=GS P20667/92-159_264-286      OS Pseudomonas putida
#=GS P20667/92-159_264-286      DE HTH-type transcriptional regulator CatR
#=GS P20667/92-159_264-286      DR GENE3D; 64ec093ad0b276e0f410d812835ceee7/92-159_264-286; 
#=GS P20667/92-159_264-286      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS S2KS70/93-160_265-287      AC S2KS70
#=GS S2KS70/93-160_265-287      OS Pseudomonas plecoglossicida NB2011
#=GS S2KS70/93-160_265-287      DE LysR family transcriptional regulator
#=GS S2KS70/93-160_265-287      DR GENE3D; 7951c246249a1a96905137f642191565/93-160_265-287; 
#=GS S2KS70/93-160_265-287      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas plecoglossicida; 
#=GS A0A024HEZ7/93-160_265-288  AC A0A024HEZ7
#=GS A0A024HEZ7/93-160_265-288  OS Pseudomonas knackmussii B13
#=GS A0A024HEZ7/93-160_265-288  DE HTH-type transcriptional regulator CatR
#=GS A0A024HEZ7/93-160_265-288  DR GENE3D; 3b2a812dc24a199dc0bda650447bd6f3/93-160_265-288; 
#=GS A0A024HEZ7/93-160_265-288  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas knackmussii; 
#=GF TC 175.6 5.3E-56
#=GF SQ 18
Q88GK5/93-160_265-287              GIGFAPSTLYTVLPELIRELRQDSELELGLNEMTTLQQVEALKSGRIDIGFGRIRIDDPVIHQQVLCEIILSRRKGDVSPIVQRCLALIEQ-
V6AEH9/94-160_265-284              -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A0H3R8Z9/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A081HGL9/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
Q79T09/94-160_265-284              -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A1D5BZS5/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A1E9D3N0/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A157WR98/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
W1MHQ1/94-160_265-284              -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A0E1AUA8/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A0H2ZBR0/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A1C7BHL7/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
Q9I0X2/94-160_265-284              -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGRIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A6V4V3/94-160_265-284              -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGHIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
A0A0V2QHF7/94-160_265-284          -IGFVPSALYGVLPELIRHLRGDPELELGLLEMTTLQQVEALKSGHIDIGFGRIRIDDPAIRQSVLSEIIVSRRQGDGSPHLRRCLAL----
P20667/92-159_264-286              GIGFAPSTLYKVLPELIRELRQDSELELGLNEMTTLQQVEALKSGRIDIAFGRIRIDDPAIHQQVLCEIILSRRKGDVSPIVQRCLTLIAQ-
S2KS70/93-160_265-287              GIGFAPSTLYTVLPELIRELRQDSELELSLSEMTTLQQVEALKSGRIDIAFGRIRVDDPAIVQQVLREIILSRRKGDMSPVVQRCLALIAQ-
A0A024HEZ7/93-160_265-288          GIGFAPSTLYAVLPELIRELRADSELELGLQEMTTLQQVEALKAGRIDIGFGRIRFDDPAIHQQVLREIVLSRRAGDVSAMVQRCLALIDQV
#=GC scorecons                     19996996994999999959949699997939999999999997989996999996999795959949986999599497466999791010
#=GC scorecons_70                  _***_*****_*******_**_*_******_******************************_*_**_*******_**_**_*******____
#=GC scorecons_80                  _***_**_**_*******_**_*_******_******************_*****_*****_*_**_***_***_**_**___*****____
#=GC scorecons_90                  _***_**_**_*******_**_*_****_*_************_*****_*****_***_*_*_**_**__***_**_*____***_*____
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