# STOCKHOLM 1.0 #=GF ID 3.40.190.10/FF/122900 #=GF DE Predicted DNA-binding transcriptional regulator #=GF AC 3.40.190.10/FF/122900 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 49.976 #=GS P76250/94-165_268-292 AC P76250 #=GS P76250/94-165_268-292 OS Escherichia coli K-12 #=GS P76250/94-165_268-292 DE HTH-type transcriptional regulator DmlR #=GS P76250/94-165_268-292 DR GENE3D; 672e56be62df4db0b4e7aeebbac33972/94-165_268-292; #=GS P76250/94-165_268-292 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS P76250/94-165_268-292 DR GO; GO:0003700; GO:0006108; GO:0045892; GO:0045893; #=GS Q32FT4/101-172_275-299 AC Q32FT4 #=GS Q32FT4/101-172_275-299 OS Shigella dysenteriae Sd197 #=GS Q32FT4/101-172_275-299 DE Putative transcriptional regulator LYSR-type #=GS Q32FT4/101-172_275-299 DR GENE3D; e187cb41d0f38b4ac6174021aca22269/101-172_275-299; #=GS Q32FT4/101-172_275-299 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella dysenteriae; #=GS A0A1M2U9N4/94-165_268-292 AC A0A1M2U9N4 #=GS A0A1M2U9N4/94-165_268-292 OS Escherichia coli #=GS A0A1M2U9N4/94-165_268-292 DE D-malate degradation protein R #=GS A0A1M2U9N4/94-165_268-292 DR GENE3D; 672e56be62df4db0b4e7aeebbac33972/94-165_268-292; #=GS A0A1M2U9N4/94-165_268-292 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A1J0HJB6/94-165_268-292 AC A0A1J0HJB6 #=GS A0A1J0HJB6/94-165_268-292 OS Escherichia coli str. K-12 substr. W3110 #=GS A0A1J0HJB6/94-165_268-292 DE LysR family transcriptional regulator #=GS A0A1J0HJB6/94-165_268-292 DR GENE3D; 672e56be62df4db0b4e7aeebbac33972/94-165_268-292; #=GS A0A1J0HJB6/94-165_268-292 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS A0A1J7Y507/94-165_268-291 AC A0A1J7Y507 #=GS A0A1J7Y507/94-165_268-291 OS Citrobacter freundii #=GS A0A1J7Y507/94-165_268-291 DE LysR family transcriptional regulator #=GS A0A1J7Y507/94-165_268-291 DR GENE3D; 6955d9bb87e373449409d853f9bf7bfc/94-165_268-291; #=GS A0A1J7Y507/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex; Citrobacter freundii; #=GS A0A0J1NRM0/94-165_268-291 AC A0A0J1NRM0 #=GS A0A0J1NRM0/94-165_268-291 OS Citrobacter sp. MGH105 #=GS A0A0J1NRM0/94-165_268-291 DE HTH-type transcriptional regulator DmlR #=GS A0A0J1NRM0/94-165_268-291 DR GENE3D; 6955d9bb87e373449409d853f9bf7bfc/94-165_268-291; #=GS A0A0J1NRM0/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex; Citrobacter sp. MGH105; #=GS A0A090TYC1/94-165_268-291 AC A0A090TYC1 #=GS A0A090TYC1/94-165_268-291 OS Citrobacter werkmanii NBRC 105721 #=GS A0A090TYC1/94-165_268-291 DE Transcriptional regulator DmlR #=GS A0A090TYC1/94-165_268-291 DR GENE3D; a55b16718dcf64741bc6e122fdb20a57/94-165_268-291; #=GS A0A090TYC1/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex; Citrobacter werkmanii; #=GS A0A124DVW0/94-165_268-291 AC A0A124DVW0 #=GS A0A124DVW0/94-165_268-291 OS Salmonella enterica #=GS A0A124DVW0/94-165_268-291 DE HTH-type transcriptional regulator DmlR #=GS A0A124DVW0/94-165_268-291 DR GENE3D; a55b16718dcf64741bc6e122fdb20a57/94-165_268-291; #=GS A0A124DVW0/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; #=GS A0A0A6ZSS5/101-172_275-299 AC A0A0A6ZSS5 #=GS A0A0A6ZSS5/101-172_275-299 OS Shigella dysenteriae 1617 #=GS A0A0A6ZSS5/101-172_275-299 DE Transcriptional regulator, LysR family protein #=GS A0A0A6ZSS5/101-172_275-299 DR GENE3D; e187cb41d0f38b4ac6174021aca22269/101-172_275-299; #=GS A0A0A6ZSS5/101-172_275-299 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella dysenteriae; #=GS A0A090NCF0/101-172_275-299 AC A0A090NCF0 #=GS A0A090NCF0/101-172_275-299 OS Shigella dysenteriae WRSd3 #=GS A0A090NCF0/101-172_275-299 DE Transcriptional regulator, LysR family protein #=GS A0A090NCF0/101-172_275-299 DR GENE3D; e187cb41d0f38b4ac6174021aca22269/101-172_275-299; #=GS A0A090NCF0/101-172_275-299 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella; Shigella dysenteriae; #=GS A0A084ZP24/94-165_267-291 AC A0A084ZP24 #=GS A0A084ZP24/94-165_267-291 OS Trabulsiella guamensis ATCC 49490 #=GS A0A084ZP24/94-165_267-291 DE Transcriptional regulator #=GS A0A084ZP24/94-165_267-291 DR GENE3D; 46ab7ba1e788eef61e922e5629002db6/94-165_267-291; #=GS A0A084ZP24/94-165_267-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Trabulsiella; Trabulsiella guamensis; #=GS M1KGJ6/94-165_268-291 AC M1KGJ6 #=GS M1KGJ6/94-165_268-291 OS Citrobacter amalonaticus Y19 #=GS M1KGJ6/94-165_268-291 DE LysR family transcriptional regulator #=GS M1KGJ6/94-165_268-291 DR GENE3D; 787656039f5adf996d8a78c9a75fe6b6/94-165_268-291; #=GS M1KGJ6/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter amalonaticus; #=GS I2B7K6/94-165_269-292 AC I2B7K6 #=GS I2B7K6/94-165_269-292 OS Shimwellia blattae DSM 4481 = NBRC 105725 #=GS I2B7K6/94-165_269-292 DE Putative uncharacterized HTH-type transcriptional regulator #=GS I2B7K6/94-165_269-292 DR GENE3D; a89fe9d5171ac706cdfae7a21001071d/94-165_269-292; #=GS I2B7K6/94-165_269-292 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shimwellia; Shimwellia blattae; #=GS A0A069CMP5/94-165_268-292 AC A0A069CMP5 #=GS A0A069CMP5/94-165_268-292 OS Serratia liquefaciens FK01 #=GS A0A069CMP5/94-165_268-292 DE Transcriptional regulator #=GS A0A069CMP5/94-165_268-292 DR GENE3D; b55ddc5fa9397e915984e69078bf5656/94-165_268-292; #=GS A0A069CMP5/94-165_268-292 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Serratia; Serratia liquefaciens; #=GS W1G2W0/101-172_275-298 AC W1G2W0 #=GS W1G2W0/101-172_275-298 OS Escherichia coli ISC11 #=GS W1G2W0/101-172_275-298 DE Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme #=GS W1G2W0/101-172_275-298 DR GENE3D; 6261c9c4caa807c4ee464f5c35fa35f8/101-172_275-298; #=GS W1G2W0/101-172_275-298 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; #=GS E3GD43/94-165_268-292 AC E3GD43 #=GS E3GD43/94-165_268-292 OS Enterobacter lignolyticus SCF1 #=GS E3GD43/94-165_268-292 DE Transcriptional regulator, LysR family #=GS E3GD43/94-165_268-292 DR GENE3D; 0a103ff44f2786c6495900d17a5920fe/94-165_268-292; #=GS E3GD43/94-165_268-292 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter lignolyticus; #=GS A0A0S3JA20/94-165_268-292 AC A0A0S3JA20 #=GS A0A0S3JA20/94-165_268-292 OS #=GS A0A0S3JA20/94-165_268-292 DE LysR family transcriptional regulator #=GS A0A0S3JA20/94-165_268-292 DR GENE3D; 0a103ff44f2786c6495900d17a5920fe/94-165_268-292; #=GS A0A0S3JA20/94-165_268-292 DR ORG; #=GS D2TM19/94-165_268-291 AC D2TM19 #=GS D2TM19/94-165_268-291 OS Citrobacter rodentium ICC168 #=GS D2TM19/94-165_268-291 DE LysR-family transcriptional regulator #=GS D2TM19/94-165_268-291 DR GENE3D; 39d44028d1dc6226ee39e32e626add2a/94-165_268-291; #=GS D2TM19/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter rodentium; #=GS A0A1F2JCH0/94-165_268-291 AC A0A1F2JCH0 #=GS A0A1F2JCH0/94-165_268-291 OS Salmonella sp. HMSC13B08 #=GS A0A1F2JCH0/94-165_268-291 DE LysR family transcriptional regulator #=GS A0A1F2JCH0/94-165_268-291 DR GENE3D; d2b8526ff42f9936bd97488fe6526f8f/94-165_268-291; #=GS A0A1F2JCH0/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella sp. HMSC13B08; #=GS A8AFQ6/94-165_268-291 AC A8AFQ6 #=GS A8AFQ6/94-165_268-291 OS Citrobacter koseri ATCC BAA-895 #=GS A8AFQ6/94-165_268-291 DE Uncharacterized protein #=GS A8AFQ6/94-165_268-291 DR GENE3D; d2b8526ff42f9936bd97488fe6526f8f/94-165_268-291; #=GS A8AFQ6/94-165_268-291 DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter koseri; #=GF TC 184.3 2.0E-58 #=GF SQ 20 P76250/94-165_268-292 QGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANVWAVYVSRLATSAKVRITVEFLR Q32FT4/101-172_275-299 QGMLRIISSFGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANVWAVYVSRLATSAKVRITVEFLR A0A1M2U9N4/94-165_268-292 QGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANVWAVYVSRLATSAKVRITVEFLR A0A1J0HJB6/94-165_268-292 QGMLRIISSFGFGRQVVAPALLALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANVWAVYVSRLATSAKVRITVEFLR A0A1J7Y507/94-165_268-291 QGMLRIISSFGFGRRVVAPALSALAKEYPQLELRFDVEDRLVDMVNEGVDLDIRIGDDIAPNLIARKLATNY-ANIWAVYVSRLATSAKIRITVEYL- A0A0J1NRM0/94-165_268-291 QGMLRIISSFGFGRRVVAPALSALAKEYPQLELRFDVEDRLVDMVNEGVDLDIRIGDDIAPNLIARKLATNY-ANIWAVYVSRLATSAKIRITVEYL- A0A090TYC1/94-165_268-291 QGMLRIISSFGFGRRVVAPALSALAKEYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANIWAVYVSRLATSAKIRITVEYL- A0A124DVW0/94-165_268-291 QGMLRIISSFGFGRRVVAPALSALAKEYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANIWAVYVSRLATSAKIRITVEYL- A0A0A6ZSS5/101-172_275-299 QGMLRIISSFGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANVWAVYVSRLATSAKVRITVEFLR A0A090NCF0/101-172_275-299 QGMLRIISSFGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLATNY-ANVWAVYVSRLATSAKVRITVEFLR A0A084ZP24/94-165_267-291 QGTLRIISSFGFGRRVVAPALSALARQYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARKLANNHPANIWAVYVSRLATSAKIRTTVEFL- M1KGJ6/94-165_268-291 QGMLRIISSFGFGRQVVAPALSALARQYPQLELRFDVEDRLVDLANEGVDLDIRIGDDIAPNLIARKLGTNY-ANIWAVYVSRLATSAKVRITVEFL- I2B7K6/94-165_269-292 QGTLRVVSSFGFGRRFVAPALSALSREYPNLEIRFDVQDKIVDLVNEGVDLDIRVGDDIDPNLIARKLGANQ-ANIWAVYVTRLAMSARVRVTVEFL- A0A069CMP5/94-165_268-292 QGTLRIVSSFGFGRRFVGPALSALALQYPALELRLDVSDRLVDLVSEGFDLDIRIGDDIAPNLIARKLAQNQ-ADIWAVYVSRLATSAKVRVTVEFLR W1G2W0/101-172_275-298 RGMLRIISSFGFGRRVVAPALSALAKEYPQLELRFDVEDRLVDMVNEGIDLDIRIGDDIAPNLIARKLATNY-ANIWAVYVSRLATSAKIRITVEYL- E3GD43/94-165_268-292 QGTLRIISSMGFGRRIVAPALSALSRQYPQLELRFDVEDRIIDLVNEGVDLDIRVGDEIAPNLIARKLADNH-ANIWAVYVSRLATSAKIRTTVEFLR A0A0S3JA20/94-165_268-292 QGTLRIISSMGFGRRIVAPALSALSRQYPQLELRFDVEDRIIDLVNEGVDLDIRVGDEIAPNLIARKLADNH-ANIWAVYVSRLATSAKIRTTVEFLR D2TM19/94-165_268-291 QGMLRIISSFGFGRRVVAPALSALAKQYPQLELRFDVADRLVDLANEGVDLDIRIGDDIAPNLIARKLGTNY-ANIWAVYVSRLAASAKVRITVEFL- A0A1F2JCH0/94-165_268-291 QGMLRIISSFGFGRRIVAPALSALAKQYPQLELRFDVEDRLVDLVNEGVDLDIRIGDEIASNLIAHKLGTNY-ANIWAVSASRLSSSAKIRITVEFL- A8AFQ6/94-165_268-291 QGMLRIISSFGFGRRIVAPALSALAKQYPQLELRFDVEDRLVDLVNEGVDLDIRIGDEIASNLIAHKLGTNY-ANIWAVSASRLSSSAKIRITVEFL- #=GC scorecons 89699879979999669899979966599699898996987898889979999979979779999799659609879997789976998796999891 #=GC scorecons_70 **_************_*********__******************************************_*__************************_ #=GC scorecons_80 **_***********__********___**_*******_******************************__*__************_***_*_*****_ #=GC scorecons_90 **_***_**_****__*_***_**___**_*******_**_**___**_*****_**_*__****_**__*__**_***___**__***_*_***_*_ //