# STOCKHOLM 1.0
#=GF ID 3.40.1690.10/FF/941
#=GF DE Yop s translocation protein U
#=GF AC 3.40.1690.10/FF/941
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 25.917
#=GS 2w0rA00/1-144       AC Q56844
#=GS 2w0rA00/1-144       OS Yersinia enterocolitica
#=GS 2w0rA00/1-144       DE YscU
#=GS 2w0rA00/1-144       DR CATH; 2w0r; A:222-343; 
#=GS 2w0rA00/1-144       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; 
#=GS 2w0rA00/1-144       DR GO; GO:0005515; 
#=GS Q56844/211-354      AC Q56844
#=GS Q56844/211-354      OS Yersinia enterocolitica
#=GS Q56844/211-354      DE YscU
#=GS Q56844/211-354      DR GENE3D; a6a3e73d13d58b5faf23313a70f0f85a/211-354; 
#=GS Q56844/211-354      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; 
#=GS Q56844/211-354      DR GO; GO:0005515; 
#=GS A0A1F0I0E9/211-348  AC A0A1F0I0E9
#=GS A0A1F0I0E9/211-348  OS Pseudomonas sp. HMSC065H01
#=GS A0A1F0I0E9/211-348  DE EscU/YscU/HrcU family type III secretion system export apparatus switch protein
#=GS A0A1F0I0E9/211-348  DR GENE3D; 0ae3c64027dde2dd07da2a8f989713cf/211-348; 
#=GS A0A1F0I0E9/211-348  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; 
#=GS A0A0C7AFE7/211-348  AC A0A0C7AFE7
#=GS A0A0C7AFE7/211-348  OS Pseudomonas aeruginosa
#=GS A0A0C7AFE7/211-348  DE Yop proteins translocation protein U
#=GS A0A0C7AFE7/211-348  DR GENE3D; 0ae3c64027dde2dd07da2a8f989713cf/211-348; 
#=GS A0A0C7AFE7/211-348  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1G5LUR0/211-348  AC A0A1G5LUR0
#=GS A0A1G5LUR0/211-348  OS Acinetobacter baumannii
#=GS A0A1G5LUR0/211-348  DE Yop proteins translocation protein U
#=GS A0A1G5LUR0/211-348  DR GENE3D; 0ae3c64027dde2dd07da2a8f989713cf/211-348; 
#=GS A0A1G5LUR0/211-348  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex; Acinetobacter baumannii; 
#=GS Q9I337/211-348      AC Q9I337
#=GS Q9I337/211-348      OS Pseudomonas aeruginosa PAO1
#=GS Q9I337/211-348      DE Translocation protein in type III secretion
#=GS Q9I337/211-348      DR GENE3D; 0ae3c64027dde2dd07da2a8f989713cf/211-348; 
#=GS Q9I337/211-348      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1E9BTB8/211-348  AC A0A1E9BTB8
#=GS A0A1E9BTB8/211-348  OS Pseudomonas sp. HMSC066B11
#=GS A0A1E9BTB8/211-348  DE EscU/YscU/HrcU family type III secretion system export apparatus switch protein
#=GS A0A1E9BTB8/211-348  DR GENE3D; 0ae3c64027dde2dd07da2a8f989713cf/211-348; 
#=GS A0A1E9BTB8/211-348  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC066B11; 
#=GS A0A0H3QUH3/211-348  AC A0A0H3QUH3
#=GS A0A0H3QUH3/211-348  OS Pseudomonas aeruginosa str. Stone 130
#=GS A0A0H3QUH3/211-348  DE YscU/HrpY family type III secretion protein
#=GS A0A0H3QUH3/211-348  DR GENE3D; 0ae3c64027dde2dd07da2a8f989713cf/211-348; 
#=GS A0A0H3QUH3/211-348  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS P69987/211-354      AC P69987
#=GS P69987/211-354      OS Yersinia pseudotuberculosis IP 32953
#=GS P69987/211-354      DE Yop proteins translocation protein U
#=GS P69987/211-354      DR GENE3D; 2889c8ef0ba2de6c1b51b4eb4162e64d/211-354; 
#=GS P69987/211-354      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pseudotuberculosis; 
#=GS E7E582/211-354      AC E7E582
#=GS E7E582/211-354      OS Yersinia pestis
#=GS E7E582/211-354      DE Type III secretion inner membrane protein
#=GS E7E582/211-354      DR GENE3D; 2889c8ef0ba2de6c1b51b4eb4162e64d/211-354; 
#=GS E7E582/211-354      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; 
#=GS P69986/211-354      AC P69986
#=GS P69986/211-354      OS Yersinia pestis
#=GS P69986/211-354      DE Yop proteins translocation protein U
#=GS P69986/211-354      DR GENE3D; 2889c8ef0ba2de6c1b51b4eb4162e64d/211-354; 
#=GS P69986/211-354      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; 
#=GS E8PSQ3/211-354      AC E8PSQ3
#=GS E8PSQ3/211-354      OS Yersinia pestis Java 9
#=GS E8PSQ3/211-354      DE Type III secretion appartus protein YscU
#=GS E8PSQ3/211-354      DR GENE3D; 2889c8ef0ba2de6c1b51b4eb4162e64d/211-354; 
#=GS E8PSQ3/211-354      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; 
#=GS A0A0U1EW23/211-354  AC A0A0U1EW23
#=GS A0A0U1EW23/211-354  OS Yersinia intermedia
#=GS A0A0U1EW23/211-354  DE Putative type III secretion protein
#=GS A0A0U1EW23/211-354  DR GENE3D; 2889c8ef0ba2de6c1b51b4eb4162e64d/211-354; 
#=GS A0A0U1EW23/211-354  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia intermedia; 
#=GS A0A0E1NN91/211-354  AC A0A0E1NN91
#=GS A0A0E1NN91/211-354  OS Yersinia pestis Antiqua
#=GS A0A0E1NN91/211-354  DE Type III secretion protein
#=GS A0A0E1NN91/211-354  DR GENE3D; 2889c8ef0ba2de6c1b51b4eb4162e64d/211-354; 
#=GS A0A0E1NN91/211-354  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; 
#=GS A0A0M1V2A4/211-354  AC A0A0M1V2A4
#=GS A0A0M1V2A4/211-354  OS Yersinia pestis biovar Orientalis str. IP275
#=GS A0A0M1V2A4/211-354  DE Type III secretion appartus protein YscU
#=GS A0A0M1V2A4/211-354  DR GENE3D; 2889c8ef0ba2de6c1b51b4eb4162e64d/211-354; 
#=GS A0A0M1V2A4/211-354  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex; Yersinia pestis; Yersinia pestis subsp. pestis; 
#=GS A0A0H3NX29/211-354  AC A0A0H3NX29
#=GS A0A0H3NX29/211-354  OS Yersinia enterocolitica subsp. palearctica Y11
#=GS A0A0H3NX29/211-354  DE Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
#=GS A0A0H3NX29/211-354  DR GENE3D; a6a3e73d13d58b5faf23313a70f0f85a/211-354; 
#=GS A0A0H3NX29/211-354  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia enterocolitica; Yersinia enterocolitica subsp. palearctica; 
#=GS A0A1D5BQG8/211-348  AC A0A1D5BQG8
#=GS A0A1D5BQG8/211-348  OS Pseudomonas sp. P179
#=GS A0A1D5BQG8/211-348  DE YscU/HrpY family type III secretion protein
#=GS A0A1D5BQG8/211-348  DR GENE3D; c82a6c5496a26e4875e6ad16a4473e0c/211-348; 
#=GS A0A1D5BQG8/211-348  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. P179; 
#=GS A0A069PZP8/211-348  AC A0A069PZP8
#=GS A0A069PZP8/211-348  OS Pseudomonas aeruginosa
#=GS A0A069PZP8/211-348  DE Yop proteins translocation protein U
#=GS A0A069PZP8/211-348  DR GENE3D; c82a6c5496a26e4875e6ad16a4473e0c/211-348; 
#=GS A0A069PZP8/211-348  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GF TC 295.2 1.2E-92
#=GF SQ 18
2w0rA00/1-144               IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSGNMRENVKRSSVVVADPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
Q56844/211-354              IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSGNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
A0A1F0I0E9/211-348          YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
A0A0C7AFE7/211-348          YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
A0A1G5LUR0/211-348          YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
Q9I337/211-348              YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
A0A1E9BTB8/211-348          YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
A0A0H3QUH3/211-348          YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
P69987/211-354              IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
E7E582/211-354              IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
P69986/211-354              IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
E8PSQ3/211-354              IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
A0A0U1EW23/211-354          IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
A0A0E1NN91/211-354          IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
A0A0M1V2A4/211-354          IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
A0A0H3NX29/211-354          IKELKMSKDEIKREYKEMEGSPEIKSKRRQFHQEIQSGNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDALVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML
A0A1D5BQG8/211-348          YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRVPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
A0A069PZP8/211-348          YKQLRMSKDEVKREYKEMEGSPEIKSKRRQFHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRVPLARALLRDGNVDQYIPADLIQATAEVLRWLESQQTDT------
#=GC scorecons              596979999979999999999999999999999969959695697999979989997999949799999999996979995655997999999797999899999955964996999975969999999999595675222222
#=GC scorecons_70           _************************************_***_*******************_******************____**********************__*__********_************_*__*_______
#=GC scorecons_80           _*_*_*****_***********************_**_*_*__*_****_******_****_*_**********_*_***____**_******_*_**********__*__**_****__*_**********_*__________
#=GC scorecons_90           _*_*_*****_***********************_**_*_*__*_****_******_****_*_**********_*_***____**_******_*_**********__*__**_****__*_**********_*__________
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