# STOCKHOLM 1.0
#=GF ID 3.40.1390.10/FF/2501
#=GF DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GF AC 3.40.1390.10/FF/2501
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 52.989
#=GS Q89FU2/2-95       AC Q89FU2
#=GS Q89FU2/2-95       OS Bradyrhizobium diazoefficiens USDA 110
#=GS Q89FU2/2-95       DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS Q89FU2/2-95       DR GENE3D; e022701d172a8c0e68a6687a9f658c6c/2-95; 
#=GS Q89FU2/2-95       DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS Q89FU2/2-95       DR EC; 6.3.2.13; 
#=GS A0A0N0C1J7/2-95   AC A0A0N0C1J7
#=GS A0A0N0C1J7/2-95   OS Bradyrhizobium japonicum
#=GS A0A0N0C1J7/2-95   DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A0N0C1J7/2-95   DR GENE3D; 02e5c087216c7f454d1910bb47af1a2b/2-95; 
#=GS A0A0N0C1J7/2-95   DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS A0A0N0C1J7/2-95   DR EC; 6.3.2.13; 
#=GS A0A1L5M678/2-95   AC A0A1L5M678
#=GS A0A1L5M678/2-95   OS Bradyrhizobium diazoefficiens
#=GS A0A1L5M678/2-95   DE UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
#=GS A0A1L5M678/2-95   DR GENE3D; 02e5c087216c7f454d1910bb47af1a2b/2-95; 
#=GS A0A1L5M678/2-95   DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS A0A1L5M678/2-95   DR EC; 6.3.2.13; 
#=GS J3I405/2-100      AC J3I405
#=GS J3I405/2-100      OS Bradyrhizobium sp. YR681
#=GS J3I405/2-100      DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS J3I405/2-100      DR GENE3D; 05e7e540625f5e1c641314929c4b33d3/2-100; 
#=GS J3I405/2-100      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. YR681; 
#=GS J3I405/2-100      DR EC; 6.3.2.13; 
#=GS A0A0R3CP96/2-100  AC A0A0R3CP96
#=GS A0A0R3CP96/2-100  OS Bradyrhizobium yuanmingense
#=GS A0A0R3CP96/2-100  DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A0R3CP96/2-100  DR GENE3D; 07484c4c1f6cf57681ecb966efdc6381/2-100; 
#=GS A0A0R3CP96/2-100  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium yuanmingense; 
#=GS A0A0R3CP96/2-100  DR EC; 6.3.2.13; 
#=GS A0A109QA78/1-95   AC A0A109QA78
#=GS A0A109QA78/1-95   OS Bradyrhizobium sp. CCGE-LA001
#=GS A0A109QA78/1-95   DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A109QA78/1-95   DR GENE3D; 30d4ee6452305007fb684a92d4574427/1-95; 
#=GS A0A109QA78/1-95   DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. CCGE-LA001; 
#=GS A0A109QA78/1-95   DR EC; 6.3.2.13; 
#=GS A0A0R3D3A3/2-100  AC A0A0R3D3A3
#=GS A0A0R3D3A3/2-100  OS Bradyrhizobium manausense
#=GS A0A0R3D3A3/2-100  DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A0R3D3A3/2-100  DR GENE3D; 313a2cee0b239f7e326c4078449b511d/2-100; 
#=GS A0A0R3D3A3/2-100  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium manausense; 
#=GS A0A0R3D3A3/2-100  DR EC; 6.3.2.13; 
#=GS A0A0S6UPI9/2-95   AC A0A0S6UPI9
#=GS A0A0S6UPI9/2-95   OS Bradyrhizobium sp. DOA9
#=GS A0A0S6UPI9/2-95   DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A0S6UPI9/2-95   DR GENE3D; 363da0a468c994147c00ce21d631298c/2-95; 
#=GS A0A0S6UPI9/2-95   DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. DOA9; 
#=GS A0A0S6UPI9/2-95   DR EC; 6.3.2.13; 
#=GS A0A0E4BLP3/2-95   AC A0A0E4BLP3
#=GS A0A0E4BLP3/2-95   OS Bradyrhizobium diazoefficiens
#=GS A0A0E4BLP3/2-95   DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A0E4BLP3/2-95   DR GENE3D; 3ed89656f28e873ab3b94cb35a23e0f1/2-95; 
#=GS A0A0E4BLP3/2-95   DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium diazoefficiens; 
#=GS A0A0E4BLP3/2-95   DR EC; 6.3.2.13; 
#=GS A0A150UIR0/1-99   AC A0A150UIR0
#=GS A0A150UIR0/1-99   OS Bradyrhizobium sp. AT1
#=GS A0A150UIR0/1-99   DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A150UIR0/1-99   DR GENE3D; 521485ad5a22e77ad8acaf5d0cd3739f/1-99; 
#=GS A0A150UIR0/1-99   DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. AT1; 
#=GS A0A150UIR0/1-99   DR EC; 6.3.2.13; 
#=GS A0A160UT52/2-100  AC A0A160UT52
#=GS A0A160UT52/2-100  OS Bradyrhizobium sp. G22
#=GS A0A160UT52/2-100  DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A160UT52/2-100  DR GENE3D; 629665eb4ee923573b8655915b1b3a88/2-100; 
#=GS A0A160UT52/2-100  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. G22; 
#=GS A0A160UT52/2-100  DR EC; 6.3.2.13; 
#=GS A0A0A3Y7K1/2-100  AC A0A0A3Y7K1
#=GS A0A0A3Y7K1/2-100  OS Bradyrhizobium japonicum
#=GS A0A0A3Y7K1/2-100  DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A0A3Y7K1/2-100  DR GENE3D; 67c1b330f3d48bf596170d726a151b25/2-100; 
#=GS A0A0A3Y7K1/2-100  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS A0A0A3Y7K1/2-100  DR EC; 6.3.2.13; 
#=GS I0G2E3/3-100      AC I0G2E3
#=GS I0G2E3/3-100      OS Bradyrhizobium sp. S23321
#=GS I0G2E3/3-100      DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS I0G2E3/3-100      DR GENE3D; 7d2bc9104b5505df9eb9fe4f355edd0b/3-100; 
#=GS I0G2E3/3-100      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. S23321; 
#=GS I0G2E3/3-100      DR EC; 6.3.2.13; 
#=GS I2QPA4/2-95       AC I2QPA4
#=GS I2QPA4/2-95       OS Bradyrhizobium sp. WSM1253
#=GS I2QPA4/2-95       DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS I2QPA4/2-95       DR GENE3D; 9a577a874eec149fd58b2f0e357e45fd/2-95; 
#=GS I2QPA4/2-95       DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. WSM1253; 
#=GS I2QPA4/2-95       DR EC; 6.3.2.13; 
#=GS A0A1C3U7T1/2-100  AC A0A1C3U7T1
#=GS A0A1C3U7T1/2-100  OS Bradyrhizobium yuanmingense
#=GS A0A1C3U7T1/2-100  DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A1C3U7T1/2-100  DR GENE3D; bb6cb30b1f29d35f949d4a3570a24fdc/2-100; 
#=GS A0A1C3U7T1/2-100  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium yuanmingense; 
#=GS A0A1C3U7T1/2-100  DR EC; 6.3.2.13; 
#=GS G7DDV2/2-100      AC G7DDV2
#=GS G7DDV2/2-100      OS Bradyrhizobium japonicum USDA 6
#=GS G7DDV2/2-100      DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS G7DDV2/2-100      DR GENE3D; bf4e3e96267de76f5699a663518d082a/2-100; 
#=GS G7DDV2/2-100      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS G7DDV2/2-100      DR EC; 6.3.2.13; 
#=GS A0A023XMS4/2-100  AC A0A023XMS4
#=GS A0A023XMS4/2-100  OS Bradyrhizobium japonicum SEMIA 5079
#=GS A0A023XMS4/2-100  DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A023XMS4/2-100  DR GENE3D; d2709e05662c0c089f8c95d696c23f9c/2-100; 
#=GS A0A023XMS4/2-100  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium japonicum; 
#=GS A0A023XMS4/2-100  DR EC; 6.3.2.13; 
#=GS A0A161K3J7/9-100  AC A0A161K3J7
#=GS A0A161K3J7/9-100  OS Bradyrhizobium sp.
#=GS A0A161K3J7/9-100  DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A161K3J7/9-100  DR GENE3D; ed4a96445e05738163bbcd16d69bb77c/9-100; 
#=GS A0A161K3J7/9-100  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp.; 
#=GS A0A161K3J7/9-100  DR EC; 6.3.2.13; 
#=GS H5YMZ3/9-100      AC H5YMZ3
#=GS H5YMZ3/9-100      OS Bradyrhizobium sp. WSM471
#=GS H5YMZ3/9-100      DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS H5YMZ3/9-100      DR GENE3D; f425d2a0ad9d415023126018444a97c3/9-100; 
#=GS H5YMZ3/9-100      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. WSM471; 
#=GS H5YMZ3/9-100      DR EC; 6.3.2.13; 
#=GS A0A1C3X6I3/2-95   AC A0A1C3X6I3
#=GS A0A1C3X6I3/2-95   OS Bradyrhizobium sp. err11
#=GS A0A1C3X6I3/2-95   DE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
#=GS A0A1C3X6I3/2-95   DR GENE3D; fd391613e4181ac7b32d4e9957583a90/2-95; 
#=GS A0A1C3X6I3/2-95   DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium; Bradyrhizobium sp. err11; 
#=GS A0A1C3X6I3/2-95   DR EC; 6.3.2.13; 
#=GF TC 187.7 4.0E-60
#=GF SQ 20
Q89FU2/2-95               -KLRDLI-----GNDAAIEPAVAALEVTGVALDSRVVRPGDLFFALAGSKTDGARFIDAAVAAGAVAIVGDHAPDGCKVPFIAVANPRRALALAAARFFP
A0A0N0C1J7/2-95           -KLRDLI-----GNDAAIEPAIAALEVTGLALDSRVVRPGDLFFALAGSKTDGARFIDAAVAAGAVAIVGDHAPGGGKVPFIAVANPRRALALAAARFFP
A0A1L5M678/2-95           -KLRDLI-----GNDAAIEPAIAALEVTGLALDSRVVRPGDLFFALAGSKTDGARFIDAAVAAGAVAIVGDHAPGGGKVPFIAVANPRRALALAAARFFP
J3I405/2-100              -KLRDLIGQDVLGNDAAIEPAVAGLEVSGVALDSRVVKSGDLFFALAGSKTDGTRFIDAAIAAGAVAVVGDHAPAGTRVPFVTVTNPRRALALAAAKFFP
A0A0R3CP96/2-100          -KLRDLLGQDVKGNDAAIEPAAAALEVSGVALDSRVVQPGNLFFALAGSKTDGARFVDAAIAAGAVAVVGDHAPAACKVPFITSANPRRALALAAARFFP
A0A109QA78/1-95           MKLCDLL-----GNDAAIEPAAAALDVSGLALDSRQVRPGDLFFALAGSKTDGARFVDAAVAAGAVAVVGDHAPDDIKVPFIAVANPRRALALAAASFFP
A0A0R3D3A3/2-100          -KLRDLLGQDALGHEAAIEPIAGALEVTGVALDSRAVKPGDLFFALAGSKTDGARFIDAAIAAGALAVVGDHAPDGCKVPFITVANPRRALALATARFFP
A0A0S6UPI9/2-95           -KLRDLL-----GNDAEIKPAAAALEVSGVALDSRAVQPGDLFFALAGSKTDGARFVDAAVAAGAVAVVGDHAPAACKVPFIAVANPRRALALAAARFFP
A0A0E4BLP3/2-95           -KLRDLI-----GNDAAIEPAVAALEVTGLALDSRVVRPGDLFFALAGSKTDGARFIDAAVAAGAVAVVGDHAPEASKVPFVTVANPRRALALAAAKFFP
A0A150UIR0/1-99           MKLRDLLGQDLLG-DAAIESAVAALEVTGLALDSRVVKPGDLFFALAGSKTDGARFIDAAIAAGAVAVVGDHAPRGGKVPFICVANPRRALALAAASFFP
A0A160UT52/2-100          -KLRDLLGQDVPGNDAAIEPAVAALDVTGVALDSRVVKPGDLFFALAGSKTDGARFVDAAIAAGAVAIVGDHAPDGSKVPFVTVANPRRALALAAAKFFP
A0A0A3Y7K1/2-100          -KLRDLLGQDVPGNDAAIEPAVAALDVTGVALDSRVVKAGDLFFALAGSKTDGARFIDAAIAAGAVAIVGDHAPDGSKVPFVTVANPRRALALAAAKFFP
I0G2E3/3-100              --LRDLLSKDVLGNDAAIEPAVAALQVTGVALDSRVVKPGDLFFALAGSKTDGARFIDAAIAAGAVAVVGDHGPAASKVPFIEVANPRRALALAAARFFP
I2QPA4/2-95               -KLRDLL-----GNDAAIEPAIAALDVTGVALDSRAVKRGDLFFALAGSKTDGARFVDAAIAAGAVAVVGDHVPDGCKVPFITVANPRRALALAAARFFP
A0A1C3U7T1/2-100          -KLRDLLGQDVKGNDAAIEPAAAALEVSGVALDSRVVQPGNLFFALAGSKTDGARFIDAAIAAGAVAVVGDHAPAACKVPFITSANPRRALALAAARFFP
G7DDV2/2-100              -KLRDLLGQDVPGNDAAIEPAVAALDVTGVALDSRVVKSGDLFFALAGSKTDGARFIDAAIAAGAVAIVGDHAPDGSKVPFVTVANPRRALALAAAKFFP
A0A023XMS4/2-100          -KLRDLLGQDVPGNDAAIEPAVAALDVTGVALDSRVVKSGDLFFALAGSKTDGARFIDAAIAAGAVAIVGDHAPDGSKVPFVTVANPRRALALAAAKFFP
A0A161K3J7/9-100          --------QDVQGNDAAIEPAVAALDVTGVALDSRAVKPGHLFFALAGSKTDGARFIDAAIAAGAVAVVGEHAPDGCKVPFISVANPRRALALAAARFFP
H5YMZ3/9-100              --------QDVQGNDAAIEPAVAALDVTGVALDSRAVKPGHLFFALAGSKTDGARFIDAAIAAGAVAVVGEHVPDGCKVPFISVANPRRALALAAARFYP
A0A1C3X6I3/2-95           -KLRDLL-----GNDAAIEPAVAALEATGLALDSRVVKAGDLFFALAGSKTDGARFIDAAVAAGAVAVVGDHAPDTSKVPFITVANPRRALALAAARFFP
#=GC scorecons            0566665123219789898886889686969999959669699999999999989979997999989799897955489997578999999999896989
#=GC scorecons_70         __*_**______*********_*************_**************************************___*****_*****************
#=GC scorecons_80         ____________*********_***_*_*_*****_*__*_*********************************___*****_*************_***
#=GC scorecons_90         ____________*_*******_***_*_*_*****_*__*_***************_***_******_****_*___****___************_***
//