# STOCKHOLM 1.0 #=GF ID 3.30.70.330/FF/43857 #=GF DE Putative RNA-binding protein R05D3.8 #=GF AC 3.30.70.330/FF/43857 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 82.337 #=GS Q09299/103-207 AC Q09299 #=GS Q09299/103-207 OS Caenorhabditis elegans #=GS Q09299/103-207 DE Putative RNA-binding protein EEED8.10 #=GS Q09299/103-207 DR GENE3D; 97b2fd4459e09a81e413b5dfabdcf7af/103-207; #=GS Q09299/103-207 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; #=GS A0A1I9GCT1/79-211 AC A0A1I9GCT1 #=GS A0A1I9GCT1/79-211 OS Brugia malayi #=GS A0A1I9GCT1/79-211 DE Bm3117 #=GS A0A1I9GCT1/79-211 DR GENE3D; d65e0d0cc30af335ff4ade4efe5ede60/79-211; #=GS A0A1I9GCT1/79-211 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Brugia; Brugia malayi; #=GS A0A0K0IR73/80-212 AC A0A0K0IR73 #=GS A0A0K0IR73/80-212 OS Brugia malayi #=GS A0A0K0IR73/80-212 DE Uncharacterized protein #=GS A0A0K0IR73/80-212 DR GENE3D; d8ee3db30c7626a7843c69a78f3f8ffb/80-212; #=GS A0A0K0IR73/80-212 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Brugia; Brugia malayi; #=GS U6NIL8/103-208 AC U6NIL8 #=GS U6NIL8/103-208 OS Haemonchus contortus #=GS U6NIL8/103-208 DE RNA recognition motif domain containing protein #=GS U6NIL8/103-208 DR GENE3D; 0c3f38f8db8d88e74f61c8a916626c9b/103-208; #=GS U6NIL8/103-208 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus; Haemonchus contortus; #=GS A0A158P8Z2/98-199 AC A0A158P8Z2 #=GS A0A158P8Z2/98-199 OS Angiostrongylus cantonensis #=GS A0A158P8Z2/98-199 DE Uncharacterized protein #=GS A0A158P8Z2/98-199 DR GENE3D; 22d678714cddac41cfa2b75a6f8426c2/98-199; #=GS A0A158P8Z2/98-199 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Metastrongyloidea; Angiostrongylidae; Angiostrongylus; Angiostrongylus cantonensis; #=GS W2T0S8/81-186 AC W2T0S8 #=GS W2T0S8/81-186 OS Necator americanus #=GS W2T0S8/81-186 DE Uncharacterized protein #=GS W2T0S8/81-186 DR GENE3D; 2e2be7738dc42cdb5f6fafc16afe7a3f/81-186; #=GS W2T0S8/81-186 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Bunostominae; Necator; Necator americanus; #=GS A0A0B1SUY2/32-136 AC A0A0B1SUY2 #=GS A0A0B1SUY2/32-136 OS Oesophagostomum dentatum #=GS A0A0B1SUY2/32-136 DE Uncharacterized protein #=GS A0A0B1SUY2/32-136 DR GENE3D; 2e7eb2dd4cba86631623deb229d4cb9d/32-136; #=GS A0A0B1SUY2/32-136 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Strongyloidea; Cloacinidae; Oesophagostomum; Oesophagostomum dentatum; #=GS H2VYI0/81-185 AC H2VYI0 #=GS H2VYI0/81-185 OS Caenorhabditis japonica #=GS H2VYI0/81-185 DE Uncharacterized protein #=GS H2VYI0/81-185 DR GENE3D; 3a4a621ab96b22d9cdc4644c139b9799/81-185; #=GS H2VYI0/81-185 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; #=GS A0A158PQ28/85-212 AC A0A158PQ28 #=GS A0A158PQ28/85-212 OS Brugia pahangi #=GS A0A158PQ28/85-212 DE Uncharacterized protein #=GS A0A158PQ28/85-212 DR GENE3D; 3e28ca65bb0d07977f24a0053657c999/85-212; #=GS A0A158PQ28/85-212 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Brugia; Brugia pahangi; #=GS A0A0R3PBY1/63-185 AC A0A0R3PBY1 #=GS A0A0R3PBY1/63-185 OS Angiostrongylus costaricensis #=GS A0A0R3PBY1/63-185 DE Uncharacterized protein #=GS A0A0R3PBY1/63-185 DR GENE3D; 4aedb87f3d4cdce70f2d98e504c6028b/63-185; #=GS A0A0R3PBY1/63-185 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Metastrongyloidea; Angiostrongylidae; Angiostrongylus; Angiostrongylus costaricensis; #=GS A0A1I8EVZ7/63-185 AC A0A1I8EVZ7 #=GS A0A1I8EVZ7/63-185 OS Wuchereria bancrofti #=GS A0A1I8EVZ7/63-185 DE Uncharacterized protein #=GS A0A1I8EVZ7/63-185 DR GENE3D; 5b02ff4b899f91cc902760295f94de10/63-185; #=GS A0A1I8EVZ7/63-185 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Wuchereria; Wuchereria bancrofti; #=GS A0A0C2FQ26/4-110 AC A0A0C2FQ26 #=GS A0A0C2FQ26/4-110 OS Ancylostoma duodenale #=GS A0A0C2FQ26/4-110 DE Uncharacterized protein #=GS A0A0C2FQ26/4-110 DR GENE3D; 5c65d97a62de226743fac2244d4b9071/4-110; #=GS A0A0C2FQ26/4-110 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma duodenale; #=GS G0PDF4/103-207 AC G0PDF4 #=GS G0PDF4/103-207 OS Caenorhabditis brenneri #=GS G0PDF4/103-207 DE Putative uncharacterized protein #=GS G0PDF4/103-207 DR GENE3D; 6682cf4534551ce86cbcdda4bdef7354/103-207; #=GS G0PDF4/103-207 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GS A0A0B2UVF5/687-815 AC A0A0B2UVF5 #=GS A0A0B2UVF5/687-815 OS Toxocara canis #=GS A0A0B2UVF5/687-815 DE Putative RNA-binding protein EEED8.10 #=GS A0A0B2UVF5/687-815 DR GENE3D; 739a454a56959d8d5600297a4a4778af/687-815; #=GS A0A0B2UVF5/687-815 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Ascaridida; Ascaridoidea; Toxocaridae; Toxocara; Toxocara canis; #=GS A0A158R2L8/104-209 AC A0A158R2L8 #=GS A0A158R2L8/104-209 OS Nippostrongylus brasiliensis #=GS A0A158R2L8/104-209 DE Uncharacterized protein #=GS A0A158R2L8/104-209 DR GENE3D; 83968af09cdc41670e39f763f0b0c902/104-209; #=GS A0A158R2L8/104-209 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Heligmonellidae; Nippostrongylinae; Nippostrongylus; Nippostrongylus brasiliensis; #=GS A0A0M3JS05/161-264 AC A0A0M3JS05 #=GS A0A0M3JS05/161-264 OS Anisakis simplex #=GS A0A0M3JS05/161-264 DE Uncharacterized protein #=GS A0A0M3JS05/161-264 DR GENE3D; 8ba71e48c7fb162f071719b1ca74acb1/161-264; #=GS A0A0M3JS05/161-264 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Ascaridida; Ascaridoidea; Anisakidae; Anisakis; Anisakis simplex; #=GS H3FNV9/112-213 AC H3FNV9 #=GS H3FNV9/112-213 OS Pristionchus pacificus #=GS H3FNV9/112-213 DE Uncharacterized protein #=GS H3FNV9/112-213 DR GENE3D; 8f97df5f45e78b2b0f63a1a552ed8941/112-213; #=GS H3FNV9/112-213 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Diplogasterida; Neodiplogasteridae; Pristionchus; Pristionchus pacificus; #=GS A0A016U195/158-280 AC A0A016U195 #=GS A0A016U195/158-280 OS Ancylostoma ceylanicum #=GS A0A016U195/158-280 DE Uncharacterized protein #=GS A0A016U195/158-280 DR GENE3D; aa13f2a4040d3ddad3502e8f661a0e83/158-280; #=GS A0A016U195/158-280 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A0A1I7V7J2/94-211 AC A0A1I7V7J2 #=GS A0A1I7V7J2/94-211 OS Loa loa #=GS A0A1I7V7J2/94-211 DE Uncharacterized protein #=GS A0A1I7V7J2/94-211 DR GENE3D; b36351b715df59289f5d1c4e22d996a2/94-211; #=GS A0A1I7V7J2/94-211 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Loa; Loa loa; #=GS A0A0N4YMI5/59-166 AC A0A0N4YMI5 #=GS A0A0N4YMI5/59-166 OS Nippostrongylus brasiliensis #=GS A0A0N4YMI5/59-166 DE Uncharacterized protein #=GS A0A0N4YMI5/59-166 DR GENE3D; be13d953247103ff03dabf989b1bfd4f/59-166; #=GS A0A0N4YMI5/59-166 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Heligmonellidae; Nippostrongylinae; Nippostrongylus; Nippostrongylus brasiliensis; #=GS A0A016U208/158-280 AC A0A016U208 #=GS A0A016U208/158-280 OS Ancylostoma ceylanicum #=GS A0A016U208/158-280 DE Uncharacterized protein #=GS A0A016U208/158-280 DR GENE3D; bee98b6eb4794d1d6d58fd304f47dc2b/158-280; #=GS A0A016U208/158-280 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostomatinae; Ancylostoma; Ancylostoma ceylanicum; #=GS A8WUF9/103-207 AC A8WUF9 #=GS A8WUF9/103-207 OS Caenorhabditis briggsae #=GS A8WUF9/103-207 DE Protein CBG02386 #=GS A8WUF9/103-207 DR GENE3D; cdd20ad46bc6ad06bec9650bbf5de8d6/103-207; #=GS A8WUF9/103-207 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; #=GS E3M4L0/103-221 AC E3M4L0 #=GS E3M4L0/103-221 OS Caenorhabditis remanei #=GS E3M4L0/103-221 DE Putative uncharacterized protein #=GS E3M4L0/103-221 DR GENE3D; dd69dbcd60b7205260fc7d0f547ca7be/103-221; #=GS E3M4L0/103-221 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; #=GS A0A0R3QRE8/64-196 AC A0A0R3QRE8 #=GS A0A0R3QRE8/64-196 OS Brugia timori #=GS A0A0R3QRE8/64-196 DE Uncharacterized protein #=GS A0A0R3QRE8/64-196 DR GENE3D; f57c59b64066b34e5bd5f180ac76280d/64-196; #=GS A0A0R3QRE8/64-196 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Spirurida; Filarioidea; Onchocercidae; Brugia; Brugia timori; #=GS G0NAZ6/103-207 AC G0NAZ6 #=GS G0NAZ6/103-207 OS Caenorhabditis brenneri #=GS G0NAZ6/103-207 DE Putative uncharacterized protein #=GS G0NAZ6/103-207 DR GENE3D; f6d06e6dacd6f859d8d001ab2278df60/103-207; #=GS G0NAZ6/103-207 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; #=GF TC 173.9 7.5E-55 #=GF SQ 25 Q09299/103-207 -----------------------------------AFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGK--------------ITSCILPREE-KKTSVFGTLPKHSRNCGTATITFKKSEHADRAKNANPEELKFYDQVMVVSAYVSKKRGGK-- A0A1I9GCT1/79-211 DEQAFNTAEFSDELTPGL---SVSAS-TQSKECDSPLQRSKNEDRKILVTNISRHVTANQLKSFFSKFGA--------------ISSCYIPSEE-RQHSLYATLPKKSRSSLTAYITFKNMEGAERAKNATADELRFYDQVMLISQLSLKKK----- A0A0K0IR73/80-212 DEQAFNTAEFSDELTPGL---SVSTS-TQSKECDSPLQRSKNEDRKILVTNISRHVTANQLKSFFSKFGA--------------ISSCYIPSEE-RQHSLYATLPKKSRSSLTAYITFKNMEGAERAKNATADELRFYDQVMLISQLSLKKK----- U6NIL8/103-208 ----------------------------------LASYAKAKEERKVIVTNVSPRVTPSQLQSFFSKFGK--------------VSHCSLPRED-RRLSMFGTLPKNLKNCGTATLTFKRPEDAEKAKNAAPEELKFYEQFMVVTPFVSRRKGGK-- A0A158P8Z2/98-199 --------------------------------------TKLKESRKIVVTNISDRVTRTQLQSFFSAFGT--------------VLHCSLPKQD-ERHSMFGTMPRSPRNCGTAMITFKRVEDAEKAKRATPDQLKFYGQCMVVSEYVSKRKSGK-- W2T0S8/81-186 -----------------------------------AFHAKSKEDRKIIVTNVSPRITPSQLQSFFSQFGK--------------VSHCSLPRED-RRHTMFGTLPRFQKNCGTAVITFKKAEDAEKAKRASPEELKFYEQTMVVSAYVSRRKGGKG- A0A0B1SUY2/32-136 -----------------------------------AFHAKAKEDRKIIVTNVSPRITPSQLQSFFSQFGK--------------VSYCSLPRED-RRQTMFGTLPRHPKNCGTAIVTFKKAEDAEKARNATPEQLKFYEQVMVVSPYVSRRRGGK-- H2VYI0/81-185 -----------------------------------AFQHTSRDDRKIVVSNISPRVTQSQLQSFFSQYGK--------------ITSCILPREE-KKTSVFGTLPKHSKNCGTATITFKKAEHAERAKNASSEELKFYDQVMVVSAYVSKKRGGK-- A0A158PQ28/85-212 ------TADFSDELTPGL---SISTSPTQSKECDSPLQRSKNEDRKILVTNISRRVTANQLKSFFSKFGA--------------ISSCYIPSEE-RQHSLYATLPKKSRSSLTAYITFKNMEGAERAKNATADELRFYDQVMLISQLSFKKK----- A0A0R3PBY1/63-185 --------------ADGQ---HFSSAETDDFDASLAYHTKLKESRKIVVTNISDRVTRTQLQSFFSIFGT--------------VLHCSLPRQD-ERHSMFGTMPRSPRNCGTATITFKRVEEAEKAKRATPDQLKFYGQCMVVSEYVSKRKGGK-- A0A1I8EVZ7/63-185 ------------ALTPDL---SISTSPTRSKECDSPLQRSKNEDRKILVTNISRRVTANQLKSFFSKFGA--------------ISSCYMPSEE-RQHSLYATLPKKSRSSLTAYITFKNMEGAERAKNATSDELKFYDQVMLISQLSLKKKS---- A0A0C2FQ26/4-110 ---------------------------------SLAYHAKSKEERKIIVTNISPRITPSQLQSFFSQFGK--------------VSHCSLPRED-RRQTMFGTMPKHQKNCGTAVIAFKKAEDAEKAKNATPEQLKFYEQIMVVSPYVSRRKGGK-- G0PDF4/103-207 -----------------------------------AFQHTSRDDRKIVVSNISSRVTQSQLQSFFSQYGK--------------ITSCILPREE-KKTSVFGTLPKHSRNCGTATITFKKAEHAERAKNASPEELKFYEQIMVVSAYVSKKRGGK-- A0A0B2UVF5/687-815 -------------GTPAFLTRSDSTRSDTSTSSGNFASRAKGEDKKVIVTNISPRLTTSQLTSFFSKFGK--------------ISTCHIPSEE-RYQSMYATMPKNTRTSLVAHITFKKAEGAEKAKRASPEELKFYDRVMVVSPYASSRKRGASA A0A158R2L8/104-209 -----------------------------------AFHAKSKEDRKIVVTNVPPRVTPSQLQSFFSKFGK--------------VSHCSLPRED-RRHSMFGTMPKHSKNCGTATITFKKAEDAEKAKNAASDELKFYEQYMVVSAYVSKRKGGKG- A0A0M3JS05/161-264 --------------------------------------HVKGEEKKIVVTNISPRVTNTQLASFFSKFGK--------------ISLCRIPSEE-RYQSIYATMPKVVRSSVVAHITFKKVEGAERAKNASADELKFYDKVMIVSSYSSARRRGTSA H3FNV9/112-213 -------------------------------------QANLKDDRKIIVTNVSSRVTQPQLQAFFTQFGK--------------VSHCSLPREDGKKTSIFATMGRSQKTCGVATITFKTAEGAQKARDATPEQLKFYDQEMIVQAFVSRKRG---- A0A016U195/158-280 --------------ADGQ---DFDSGETDDFDASLAFHAKSKEDRKIIITNISPRITPSQLQSFFSQFGK--------------VSHCSLPRED-RRQTMFGTMPKHQKNCGTAVITFKKAEDAEKAKNATPEQLKFYEQIMVVSPYVSRRKGGK-- A0A1I7V7J2/94-211 -----------------L---SMSASPTRTRERGSSLQRSKNEDRKILVTNISRRVTANQLKSFFSKFGH--------------ITSCYMPSEE-REHSLYATLPKKSRSNLTACITFKCVEGAERAKNAAPDELRFYDQVMLISQLSIKKKS---- A0A0N4YMI5/59-166 ---------------------------------SLAYHAKSKEERKIVVTNVPPRVTPSQLQSFFSKFGK--------------VSHCSLPRED-RRHSMFGTMPKHSKNCGTATITFKKAEDAEKAKTAASDELKFYEQYMVVSAYVSKRKGGKG- A0A016U208/158-280 --------------ADGQ---DFDSGETDDFDASLAFHAKSKEDRKIIITNISPRITPSQLQSFFSQFGK--------------VSHCSLPRED-RRQTMFGTMPKHQKNCGTAVITFKKAEDAEKAKNATPEQLKFYEQIMVVSPYVSRRKGGK-- A8WUF9/103-207 -----------------------------------AFQHTSRDDRKIVVSNISSRVTQSQLQSFFSQYGK--------------VTSCILPREE-KKTSIFGTLPKHSKNCGTATITFKKAEHAERAKNASPEELKFYDQLMVVSAYVSKKRGGK-- E3M4L0/103-221 -----------------------------------AFQHTSRDDRKIVVSNISSRVTQSQLQSFFSQYGKVSFSYKCALKRYFQITSCILPREE-KKTSIFGTLPKHSKNCGTATITFKKAEHAERAKNASPEELKFYEQVMVVSAYVSKKRGGK-- A0A0R3QRE8/64-196 DEQAFNTAEFSDELTPGL---SVSTS-TQSKECDSPLQRSKNEDRKILVTNISRHVTANQLKSFFSKFGA--------------ISSCYIPSEE-RQHSLYATLPKKSRSSLTAYITFKNMEGAERAKNATADELRFYDQVMLISQLSLKKK----- G0NAZ6/103-207 -----------------------------------AFQHTSRDDRKIVVSNISSRVTQSQLQSFFSQYGK--------------ITSCILPREE-KKTSVFGTLPKHSRNCGTATITFKKAEHAERAKNASPEELKFYEQIMVVSAYVSKKRGGK-- #=GC scorecons 0000000000000010100001011101010101143544457789868797847794599689985795000000000000007549469587065575769687447564793889955949879869557797996849678455567743300 #=GC scorecons_70 __________________________________________*****_*****_***__**_****_**_______________*__*_**_**_*__*_*_****__*___**_****__*_*******__********_****____***_____ #=GC scorecons_80 __________________________________________*_***_*_***_***__**_****_**__________________*__*_*_____*_*_*_**______**_****__*_**_**_*____****_*_*_**______*_____ #=GC scorecons_90 ____________________________________________***_*_*_*___*__**_****__*__________________*__*_*_________*_*________*_****__*_**_**_*____*_**_*_*_______________ //