# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/17888
#=GF DE Split ends, isoform H
#=GF AC 3.30.70.330/FF/17888
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 30.297
#=GS Q8SX83/730-824      AC Q8SX83
#=GS Q8SX83/730-824      OS Drosophila melanogaster
#=GS Q8SX83/730-824      DE Protein split ends
#=GS Q8SX83/730-824      DR GENE3D; 0d86764a6c57a234d0abc84ebe01cfe2/730-824; 
#=GS Q8SX83/730-824      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q8SX83/730-824      DR GO; GO:0005634; GO:0006351; GO:0006355; GO:0007173; GO:0007379; GO:0007400; GO:0007403; GO:0007411; GO:0007422; GO:0008586; GO:0016055; GO:0030177; GO:0030431; GO:0035222; GO:0035321; GO:0048106; GO:0048749; GO:0050832; 
#=GS M9PBZ3/673-767      AC M9PBZ3
#=GS M9PBZ3/673-767      OS Drosophila melanogaster
#=GS M9PBZ3/673-767      DE Split ends, isoform H
#=GS M9PBZ3/673-767      DR GENE3D; 5f654995097af5a951e7f9a55ffaf3a0/673-767; 
#=GS M9PBZ3/673-767      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS M9PDR5/680-774      AC M9PDR5
#=GS M9PDR5/680-774      OS Drosophila melanogaster
#=GS M9PDR5/680-774      DE Split ends, isoform F
#=GS M9PDR5/680-774      DR GENE3D; 67d6bbfef1dc5d019685e31338b5746a/680-774; 
#=GS M9PDR5/680-774      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS M9PBJ8/675-769      AC M9PBJ8
#=GS M9PBJ8/675-769      OS Drosophila melanogaster
#=GS M9PBJ8/675-769      DE Split ends, isoform G
#=GS M9PBJ8/675-769      DR GENE3D; 79bd16109ec5cdb24d2456b4dd359397/675-769; 
#=GS M9PBJ8/675-769      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS M9NCM6/675-769      AC M9NCM6
#=GS M9NCM6/675-769      OS Drosophila melanogaster
#=GS M9NCM6/675-769      DE Split ends, isoform D
#=GS M9NCM6/675-769      DR GENE3D; af442bf95745c7b7eecefb5606c7a91c/675-769; 
#=GS M9NCM6/675-769      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS A0A0M3QTA6/575-669  AC A0A0M3QTA6
#=GS A0A0M3QTA6/575-669  OS Drosophila busckii
#=GS A0A0M3QTA6/575-669  DE Spen
#=GS A0A0M3QTA6/575-669  DR GENE3D; 05aeb5c5d279adb4931fd52ff5abc123/575-669; 
#=GS A0A0M3QTA6/575-669  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Dorsilopha; Drosophila busckii; 
#=GS B4GJN1/788-883      AC B4GJN1
#=GS B4GJN1/788-883      OS Drosophila persimilis
#=GS B4GJN1/788-883      DE GL25911
#=GS B4GJN1/788-883      DR GENE3D; 131f5859d0db4418c53fb4f431328f77/788-883; 
#=GS B4GJN1/788-883      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS B4MTV2/704-798      AC B4MTV2
#=GS B4MTV2/704-798      OS Drosophila willistoni
#=GS B4MTV2/704-798      DE Uncharacterized protein
#=GS B4MTV2/704-798      DR GENE3D; 3a3916d7d96c62579de96be09dbc0df2/704-798; 
#=GS B4MTV2/704-798      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B3N786/740-834      AC B3N786
#=GS B3N786/740-834      OS Drosophila erecta
#=GS B3N786/740-834      DE Uncharacterized protein, isoform A
#=GS B3N786/740-834      DR GENE3D; 3b0bbd82e8dd7dde63853d2216f35c12/740-834; 
#=GS B3N786/740-834      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B5DHQ9/743-838      AC B5DHQ9
#=GS B5DHQ9/743-838      OS Drosophila pseudoobscura pseudoobscura
#=GS B5DHQ9/743-838      DE Uncharacterized protein
#=GS B5DHQ9/743-838      DR GENE3D; 59ff319d3f241b128c3f4dbffdd1c20e/743-838; 
#=GS B5DHQ9/743-838      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4LU67/779-873      AC B4LU67
#=GS B4LU67/779-873      OS Drosophila virilis
#=GS B4LU67/779-873      DE Uncharacterized protein
#=GS B4LU67/779-873      DR GENE3D; 5b56f86b25bc67e72ffad507386ae056/779-873; 
#=GS B4LU67/779-873      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B3MUC6/721-815      AC B3MUC6
#=GS B3MUC6/721-815      OS Drosophila ananassae
#=GS B3MUC6/721-815      DE Uncharacterized protein
#=GS B3MUC6/721-815      DR GENE3D; 62f366abc467cc836e2d792e9d36c7af/721-815; 
#=GS B3MUC6/721-815      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4ICT1/729-823      AC B4ICT1
#=GS B4ICT1/729-823      OS Drosophila sechellia
#=GS B4ICT1/729-823      DE GM16721
#=GS B4ICT1/729-823      DR GENE3D; 69683e3b19324630d2c9c3510c471320/729-823; 
#=GS B4ICT1/729-823      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4JBE8/741-835      AC B4JBE8
#=GS B4JBE8/741-835      OS Drosophila grimshawi
#=GS B4JBE8/741-835      DE GH11539
#=GS B4JBE8/741-835      DR GENE3D; 6c6d9f165124e9324f426b0234eeca58/741-835; 
#=GS B4JBE8/741-835      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4KHF2/717-811      AC B4KHF2
#=GS B4KHF2/717-811      OS Drosophila mojavensis
#=GS B4KHF2/717-811      DE Uncharacterized protein
#=GS B4KHF2/717-811      DR GENE3D; c04f348a9ca8b3a93262706df74e2194/717-811; 
#=GS B4KHF2/717-811      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4P2A5/679-773      AC B4P2A5
#=GS B4P2A5/679-773      OS Drosophila yakuba
#=GS B4P2A5/679-773      DE Uncharacterized protein
#=GS B4P2A5/679-773      DR GENE3D; d57b846023138ca1d05577829e037d0e/679-773; 
#=GS B4P2A5/679-773      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4Q5N5/729-823      AC B4Q5N5
#=GS B4Q5N5/729-823      OS Drosophila simulans
#=GS B4Q5N5/729-823      DE GD23006
#=GS B4Q5N5/729-823      DR GENE3D; f41e16b1ff42b1079c1cc221f4acfce1/729-823; 
#=GS B4Q5N5/729-823      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF TC 206.3 6.0E-65
#=GF SQ 17
Q8SX83/730-824              SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASRECQDAFYDKQEKQQQQSS-
M9PBZ3/673-767              SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASRECQDAFYDKQEKQQQQSS-
M9PDR5/680-774              SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASRECQDAFYDKQEKQQQQSS-
M9PBJ8/675-769              SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASRECQDAFYDKQEKQQQQSS-
M9NCM6/675-769              SMPTNCVWIDGVDEKVSESFLQSQFTRFGAVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRRKKLQVDFASRECQDAFYDKQEKQQQQSS-
A0A0M3QTA6/575-669          SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRSRQLALVLYDQVQNAQAAVKDMRGTLMRGRRLQVDFASRECQDAFHDKQEKQQKQEQ-
B4GJN1/788-883              SMPTNCVWIDGVGEKVSESFLQSQFTRFGAVTKVSIDRQRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDFASRECQDAFYDKQEKLQQQQQQ
B4MTV2/704-798              SMPTNCVWIDGVGDKVSESVLQSQFTRFGTVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTIMRGKRLQVDFASRECQDAFYDKQDKQLQQSS-
B3N786/740-834              SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTILRNRKLQVDFASRECQDAFYDKQEKQQQQSS-
B5DHQ9/743-838              SMPTNCVWIDGVGEKVSESFLQSQFTRFGAVTKVSIDRQRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDFASRECQDAFYDKQEKLQQQQQQ
B4LU67/779-873              SMPTNCVWIDGVGEKVSETFLQSQFTRFGTVTKVSIDRTRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDFASRECQDAFYDKQEKQQQQQQ-
B3MUC6/721-815              SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRNRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDFASRECQDAFYDKQEKQAQQQQ-
B4ICT1/729-823              SMPTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSIDRSKQLALVLYDQVQNAQAAVKDMRGTILRGRKLQVDFASRECQDAFYDKQEKQQQQSS-
B4JBE8/741-835              SMPTNCVWIDGCGEKVSESFLQSQFTRFGTVTKVSIDRTRQLALVLYDQVQNAQAAVKDMRGTIMRGRKLQVDFASRECQDAFYDKQEKQQQQQQ-
B4KHF2/717-811              SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRMRQLALVLYDQVQNAQAAVKEMRGTIMRGRKLQVDFASHECQDAFYDKLEKQQQQQQ-
B4P2A5/679-773              SMPTNCVWIDGVGEKVSESFLQSQFTRFGTVTKVSIDRSRQLALVLYDQVQNAQAAVKDMRGTILRGRKLQVDFASRECQDAFYDKQEKQQQQSS-
B4Q5N5/729-823              SMPTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSIDRSKQLALVLYDQVQNAQAAVKDMRGTILRGRKLQVDFASRECQDAFYDKQEKQQQQSS-
#=GC scorecons              999999999998689979889999999996999999994899999999999999999989999869678999999989999998997897789550
#=GC scorecons_70           **************************************_***************************_**************************___
#=GC scorecons_80           ************_****************_********_*************************_*_**********************_***___
#=GC scorecons_90           ************_***_**_*********_********_*************************_*___*****************_**__**___
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