# STOCKHOLM 1.0
#=GF ID 3.30.70.330/FF/12770
#=GF DE Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
#=GF AC 3.30.70.330/FF/12770
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 21.337
#=GS P32588/156-274      AC P32588
#=GS P32588/156-274      OS Saccharomyces cerevisiae S288C
#=GS P32588/156-274      DE Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
#=GS P32588/156-274      DR GENE3D; 3dcefc6fb31a6a0d8657f44ed3f56adc/156-274; 
#=GS P32588/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P32588/156-274      DR GO; GO:0000184; GO:0000932; GO:0003729; GO:0005515; GO:0005634; GO:0005737; GO:0008266; GO:0010494; GO:0034063; GO:0043488; 
#=GS E7Q8Q5/156-258      AC E7Q8Q5
#=GS E7Q8Q5/156-258      OS Saccharomyces cerevisiae FostersB
#=GS E7Q8Q5/156-258      DE Pub1p
#=GS E7Q8Q5/156-258      DR GENE3D; 00ff1c63496885adcccc415be43f4ffd/156-258; 
#=GS E7Q8Q5/156-258      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7QK28/156-274      AC E7QK28
#=GS E7QK28/156-274      OS Saccharomyces cerevisiae VL3
#=GS E7QK28/156-274      DE Pub1p
#=GS E7QK28/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS E7QK28/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VR20/156-274      AC B5VR20
#=GS B5VR20/156-274      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VR20/156-274      DE YNL016Wp-like protein
#=GS B5VR20/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS B5VR20/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZS61/156-274      AC A6ZS61
#=GS A6ZS61/156-274      OS Saccharomyces cerevisiae YJM789
#=GS A6ZS61/156-274      DE Poly(A) binding protein
#=GS A6ZS61/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS A6ZS61/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LPQ2/156-274      AC B3LPQ2
#=GS B3LPQ2/156-274      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LPQ2/156-274      DE Poly(A) binding protein
#=GS B3LPQ2/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS B3LPQ2/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GMR3/156-274      AC H0GMR3
#=GS H0GMR3/156-274      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GMR3/156-274      DE Pub1p
#=GS H0GMR3/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS H0GMR3/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS E7KTP3/156-274      AC E7KTP3
#=GS E7KTP3/156-274      OS Saccharomyces cerevisiae Lalvin QA23
#=GS E7KTP3/156-274      DE Pub1p
#=GS E7KTP3/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS E7KTP3/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZFL1/156-274      AC C8ZFL1
#=GS C8ZFL1/156-274      OS Saccharomyces cerevisiae EC1118
#=GS C8ZFL1/156-274      DE Pub1p
#=GS C8ZFL1/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS C8ZFL1/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C7GJF4/156-274      AC C7GJF4
#=GS C7GJF4/156-274      OS Saccharomyces cerevisiae JAY291
#=GS C7GJF4/156-274      DE Pub1p
#=GS C7GJF4/156-274      DR GENE3D; 04b9e4df19a639114f3fb93712807a54/156-274; 
#=GS C7GJF4/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WL42/156-274      AC G2WL42
#=GS G2WL42/156-274      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WL42/156-274      DE K7_Pub1p
#=GS G2WL42/156-274      DR GENE3D; 30a135bc241e38136441df38c9defb82/156-274; 
#=GS G2WL42/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS J5RLL9/156-255      AC J5RLL9
#=GS J5RLL9/156-255      OS Saccharomyces kudriavzevii IFO 1802
#=GS J5RLL9/156-255      DE PUB1-like protein
#=GS J5RLL9/156-255      DR GENE3D; 374aacfa5206c93232fff4111865a068/156-255; 
#=GS J5RLL9/156-255      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS N1NXN6/156-274      AC N1NXN6
#=GS N1NXN6/156-274      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1NXN6/156-274      DE Pub1p
#=GS N1NXN6/156-274      DR GENE3D; 3dcefc6fb31a6a0d8657f44ed3f56adc/156-274; 
#=GS N1NXN6/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8VJ27/156-274  AC A0A0L8VJ27
#=GS A0A0L8VJ27/156-274  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VJ27/156-274  DE PUB1p Poly (A)+ RNA-binding protein
#=GS A0A0L8VJ27/156-274  DR GENE3D; a730ccdd0b1129bab5885bd009b4b3d6/156-274; 
#=GS A0A0L8VJ27/156-274  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A0A0L8RD80/157-259  AC A0A0L8RD80
#=GS A0A0L8RD80/157-259  OS Saccharomyces eubayanus
#=GS A0A0L8RD80/157-259  DE PUB1-like protein
#=GS A0A0L8RD80/157-259  DR GENE3D; bf2847776f52c29d4008c1aa8d047f86/157-259; 
#=GS A0A0L8RD80/157-259  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS H0H0E9/156-255      AC H0H0E9
#=GS H0H0E9/156-255      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0H0E9/156-255      DE Pub1p
#=GS H0H0E9/156-255      DR GENE3D; c851a2f50156d34c4331c5ad41851104/156-255; 
#=GS H0H0E9/156-255      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS E7LZN8/156-274      AC E7LZN8
#=GS E7LZN8/156-274      OS Saccharomyces cerevisiae Vin13
#=GS E7LZN8/156-274      DE Pub1p
#=GS E7LZN8/156-274      DR GENE3D; ef62264acbda3e96bd5aeb4778559700/156-274; 
#=GS E7LZN8/156-274      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF TC 223.7 1.3E-70
#=GF SQ 17
P32588/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNSNNNNNM
E7Q8Q5/156-258              QSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGN-----------------
E7QK28/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
B5VR20/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
A6ZS61/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
B3LPQ2/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
H0GMR3/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
E7KTP3/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
C8ZFL1/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
C7GJF4/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
G2WL42/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNSNNNNNM
J5RLL9/156-255              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAKRDNNNSNNNNNNNNY-------------------
N1NXN6/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNSNNNNNM
A0A0L8VJ27/156-274          -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNSNNM
A0A0L8RD80/157-259          -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDSMQGQDLNGRPLRINWAAKRDNNNSNNNNNNNN---------------NNNN-
H0H0E9/156-255              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAKRDNNNSNNNNNNNNY-------------------
E7LZN8/156-274              -SSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRRNYGNNNRGGFRQYNNNNNNNM
#=GC scorecons              099999999999999999999999999999999999999999999999999999999999999699969999999999999999999999969955555963322222222221233332
#=GC scorecons_70           _**************************************************************_***************************_**_____**___________________
#=GC scorecons_80           _**************************************************************_***_***********************_**_____*____________________
#=GC scorecons_90           _**************************************************************_***_***********************_**_____*____________________
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