# STOCKHOLM 1.0
#=GF ID 3.30.70.270/FF/32446
#=GF DE Pol polyprotein
#=GF AC 3.30.70.270/FF/32446
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 36.788
#=GS P23427/233-256_298-356  AC P23427
#=GS P23427/233-256_298-356  OS Visna lentivirus (strain 1514 / clone LV1-1KS2)
#=GS P23427/233-256_298-356  DE Pol polyprotein
#=GS P23427/233-256_298-356  DR GENE3D; 0bd0b50b95f1d38694ecd2475a32773d/233-256_298-356; 
#=GS P23427/233-256_298-356  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Visna/maedi virus; 
#=GS P23427/233-256_298-356  DR EC; 2.7.7.49; 3.1.13.2; 3.1.26.13; 3.6.1.23; 
#=GS P03370/233-256_298-356  AC P03370
#=GS P03370/233-256_298-356  OS Visna lentivirus (strain 1514)
#=GS P03370/233-256_298-356  DE Pol polyprotein
#=GS P03370/233-256_298-356  DR GENE3D; 7d2e58adb2f05d57c8dff24110188aef/233-256_298-356; 
#=GS P03370/233-256_298-356  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Visna/maedi virus; 
#=GS P03370/233-256_298-356  DR EC; 2.7.7.49; 3.1.13.2; 3.1.26.13; 3.6.1.23; 
#=GS P35956/229-252_294-352  AC P35956
#=GS P35956/229-252_294-352  OS Visna/maedi virus EV1 KV1772
#=GS P35956/229-252_294-352  DE Pol polyprotein
#=GS P35956/229-252_294-352  DR GENE3D; ab78e1223c47d439429f262a4bb3eb5f/229-252_294-352; 
#=GS P35956/229-252_294-352  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Visna/maedi virus; 
#=GS P35956/229-252_294-352  DR EC; 2.7.7.49; 3.1.13.2; 3.1.26.13; 3.6.1.23; 
#=GS P16901/214-237_279-337  AC P16901
#=GS P16901/214-237_279-337  OS Ovine lentivirus (strain SA-OMVV)
#=GS P16901/214-237_279-337  DE Pol polyprotein
#=GS P16901/214-237_279-337  DR GENE3D; e8ee91a86339b882194673dd96aa7fe8/214-237_279-337; 
#=GS P16901/214-237_279-337  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Visna/maedi virus; 
#=GS P16901/214-237_279-337  DR EC; 2.7.7.49; 3.1.13.2; 3.1.26.13; 3.6.1.23; 
#=GS Q1W0S4/214-237_279-337  AC Q1W0S4
#=GS Q1W0S4/214-237_279-337  OS Ovine lentivirus
#=GS Q1W0S4/214-237_279-337  DE Pol protein
#=GS Q1W0S4/214-237_279-337  DR GENE3D; e8ee91a86339b882194673dd96aa7fe8/214-237_279-337; 
#=GS Q1W0S4/214-237_279-337  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Ovine lentivirus; 
#=GS Q1W0S4/214-237_279-337  DR EC; 2.7.7.49; 3.1.13.2; 3.1.26.13; 3.6.1.23; 
#=GS P23426/233-256_298-356  AC P23426
#=GS P23426/233-256_298-356  OS Visna lentivirus (strain 1514 / clone LV1-1KS1)
#=GS P23426/233-256_298-356  DE Pol polyprotein
#=GS P23426/233-256_298-356  DR GENE3D; f4620fd3c1b269ddb2feccc89d55426a/233-256_298-356; 
#=GS P23426/233-256_298-356  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Visna/maedi virus; 
#=GS P23426/233-256_298-356  DR EC; 2.7.7.49; 3.1.13.2; 3.1.26.13; 3.6.1.23; 
#=GS Q6SP70/233-256_298-356  AC Q6SP70
#=GS Q6SP70/233-256_298-356  OS Small ruminant lentivirus
#=GS Q6SP70/233-256_298-356  DE Pol protein
#=GS Q6SP70/233-256_298-356  DR GENE3D; 052ba34bf0788a38d7d2e5d8b32e0444/233-256_298-356; 
#=GS Q6SP70/233-256_298-356  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GS Q7LZ06/213-236_278-336  AC Q7LZ06
#=GS Q7LZ06/213-236_278-336  OS Visna/maedi virus
#=GS Q7LZ06/213-236_278-336  DE Pol protein
#=GS Q7LZ06/213-236_278-336  DR GENE3D; a5a921bba2ae635785eabb73da052fe0/213-236_278-336; 
#=GS Q7LZ06/213-236_278-336  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Visna/maedi virus; 
#=GS Q6H1V5/235-258_300-358  AC Q6H1V5
#=GS Q6H1V5/235-258_300-358  OS Small ruminant lentivirus
#=GS Q6H1V5/235-258_300-358  DE Pol protein
#=GS Q6H1V5/235-258_300-358  DR GENE3D; b3875c8c97049f284bff614e6d8cc2dd/235-258_300-358; 
#=GS Q6H1V5/235-258_300-358  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Caprine arthritis encephalitis virus; 
#=GS Q7ZSJ9/104-127_169-227  AC Q7ZSJ9
#=GS Q7ZSJ9/104-127_169-227  OS Ovine lentivirus
#=GS Q7ZSJ9/104-127_169-227  DE Pol polyprotein
#=GS Q7ZSJ9/104-127_169-227  DR GENE3D; ef040c1c0ed8b540b35a0a8ae11c873d/104-127_169-227; 
#=GS Q7ZSJ9/104-127_169-227  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Ovine lentivirus; 
#=GF TC 130.4 1.7E-41
#=GF SQ 10
P23427/233-256_298-356          LGLPHPGGLQRKKHVTILDIGDAYPAVYQFTMQKILRGWIEEHPMIQFGIYMDDIYIGSDLGLEEHRGIVNELASYIAQYGFM
P03370/233-256_298-356          LGLPHPGGLQRKKHVTILDIGDAYPAVYQFTMQKILRGWIEEHPMIQFGIYMDDIYIGSDLGLEEHRGIVNELASYIAQYGFM
P35956/229-252_294-352          LGLPHPGGLQRKKHVTILDIGDAYPAVYQFTMQKILRGWIEEHPMIQFGIYMDDIYIGSDLGLEEHRGIVNELASYIAQYGFM
P16901/214-237_279-337          LGLPHPGGLQKKKHVTILDIGDAYPSVYQFTMQEILRDWIAKHPMIQFGIYMDDIYIGSDLDIMKHREIVEELASYIAQYGFM
Q1W0S4/214-237_279-337          LGLPHPGGLQKKKHVTILDIGDAYPSVYQFTMQEILRDWIAKHPMIQFGIYMDDIYIGSDLDIMKHREIVEELASYIAQYGFM
P23426/233-256_298-356          LGLPHPGGLQRKKHVTILDIGDAYPSVYQFTMQKILRGWIEEHPMIQFGIYMDDIYIGSDLGLEEHRGIVNELASYIAQYGFM
Q6SP70/233-256_298-356          LGLPHPGGLKKKKNVTILDIGDAYPSVYQFTMQRILRDWIEEHPMIQFGIYMDDIYIGSDLEITKHRQIVDELADYIAQFGFM
Q7LZ06/213-236_278-336          LGLPHPGGLQKKKHVTVLDIGDAYPSVYQFTMQEILRDWIREHPMVQFGIYMDDIYIGSDLEMGEHRRIVEELASYIAQYGFM
Q6H1V5/235-258_300-358          LGLPHPGGLKKRKNVTVLDIGDAYPSVYQFTMQEILWEWIKEHPLIQFGIYMDGIYIGSDLEIGEHRKIVNNLAGYIAQYGFM
Q7ZSJ9/104-127_169-227          LGLPHPGGLQKKKHVTILDISDAYPAVYQFTMQSILRSWIAKHPLIQFGIYMDDIYIGSDMDIEKHRGVVEELAAYIAQYGFM
#=GC scorecons                  99999999967796997999799996999999949974994699789999999799999975636994895799599998999
#=GC scorecons_70               *************************_*******_***_**_********************____**_**_***_********
#=GC scorecons_80               *********_***_***********_*******_***_**__**_****************____**_**_***_********
#=GC scorecons_90               *********___*_**_***_****_*******_**__**__**_********_******_____**_**__**_********
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