# STOCKHOLM 1.0
#=GF ID 3.30.70.270/FF/31470
#=GF DE Reverse transcriptase
#=GF AC 3.30.70.270/FF/31470
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 13.438
#=GS Q9BXR3/241-330    AC Q9BXR3
#=GS Q9BXR3/241-330    OS Homo sapiens
#=GS Q9BXR3/241-330    DE Endogenous retrovirus group K member 6 Pol protein
#=GS Q9BXR3/241-330    DR GENE3D; 327711aa93d31ade345b8b29534fe9ea/241-330; 
#=GS Q9BXR3/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9BXR3/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS Q9UQG0/241-330    AC Q9UQG0
#=GS Q9UQG0/241-330    OS Homo sapiens
#=GS Q9UQG0/241-330    DE Endogenous retrovirus group K member 11 Pol protein
#=GS Q9UQG0/241-330    DR GENE3D; 4f0149156d7a5492362f70532b06ba84/241-330; 
#=GS Q9UQG0/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9UQG0/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS Q9WJR5/244-333    AC Q9WJR5
#=GS Q9WJR5/244-333    OS Homo sapiens
#=GS Q9WJR5/244-333    DE Endogenous retrovirus group K member 19 Pol protein
#=GS Q9WJR5/244-333    DR GENE3D; 7eaa2680aaff0ea3f0609bd577ef1f20/244-333; 
#=GS Q9WJR5/244-333    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9WJR5/244-333    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS P63135/241-330    AC P63135
#=GS P63135/241-330    OS Homo sapiens
#=GS P63135/241-330    DE Endogenous retrovirus group K member 7 Pol protein
#=GS P63135/241-330    DR GENE3D; 88eb166b4a4cf123ca93e3cc104c8bea/241-330; 
#=GS P63135/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P63135/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS Q9QC07/241-330    AC Q9QC07
#=GS Q9QC07/241-330    OS Homo sapiens
#=GS Q9QC07/241-330    DE Endogenous retrovirus group K member 18 Pol protein
#=GS Q9QC07/241-330    DR GENE3D; fe9d653b01edb7041fece5fdd86a7b77/241-330; 
#=GS Q9QC07/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9QC07/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS P63132/241-330    AC P63132
#=GS P63132/241-330    OS Homo sapiens
#=GS P63132/241-330    DE Endogenous retrovirus group K member 113 Pol protein
#=GS P63132/241-330    DR GENE3D; 6161bc865e082e1cb4a43accf6e4154c/241-330; 
#=GS P63132/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P63132/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS P10266/241-330    AC P10266
#=GS P10266/241-330    OS Homo sapiens
#=GS P10266/241-330    DE Endogenous retrovirus group K member 10 Pol protein
#=GS P10266/241-330    DR GENE3D; 5b7ac44dce8445ac9152909b8d235727/241-330; 
#=GS P10266/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P10266/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS P63133/241-330    AC P63133
#=GS P63133/241-330    OS Homo sapiens
#=GS P63133/241-330    DE Endogenous retrovirus group K member 8 Pol protein
#=GS P63133/241-330    DR GENE3D; 6f4b48c14b0a2ee7e700448e8ce9a2bf/241-330; 
#=GS P63133/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P63133/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS P63136/241-330    AC P63136
#=GS P63136/241-330    OS Homo sapiens
#=GS P63136/241-330    DE Endogenous retrovirus group K member 25 Pol protein
#=GS P63136/241-330    DR GENE3D; b0bd55070117ac9ef1c6d068db4d8515/241-330; 
#=GS P63136/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS P63136/241-330    DR EC; 2.7.7.49; 3.1.26.4; 
#=GS V9H0H3/1164-1253  AC V9H0H3
#=GS V9H0H3/1164-1253  OS Homo sapiens
#=GS V9H0H3/1164-1253  DE Gag-Pro-Pol-Env protein
#=GS V9H0H3/1164-1253  DR GENE3D; 5e538c6cd23d43c13444ef856a1ecded/1164-1253; 
#=GS V9H0H3/1164-1253  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q0PKG6/241-330    AC Q0PKG6
#=GS Q0PKG6/241-330    OS Homo sapiens
#=GS Q0PKG6/241-330    DE Reverse transcriptase
#=GS Q0PKG6/241-330    DR GENE3D; a3320b5d54f80ad3e84d59287989c583/241-330; 
#=GS Q0PKG6/241-330    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q69013/217-306    AC Q69013
#=GS Q69013/217-306    OS Human endogenous retrovirus
#=GS Q69013/217-306    DE Polymerase
#=GS Q69013/217-306    DR GENE3D; bd912532aae117bd167a8076d72f96a2/217-306; 
#=GS Q69013/217-306    DR ORG; Viruses; Retroviridae; Human endogenous retrovirus; 
#=GF TC 202.2 4.4E-64
#=GF SQ 12
Q9BXR3/241-330            LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRMLTPEATKEIKLVEEKIQSAQINR
Q9UQG0/241-330            LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRILTPEATKEIKLVEEKIQSAQINR
Q9WJR5/244-333            LEMQIENRKIKPPKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRMLTPEATKEIKLVEEKIQSAQINR
P63135/241-330            LGMQIENRKIKQQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRILTPEATKEIKLVEEKIQSAQINR
Q9QC07/241-330            LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRMLTPEATKEIKLVEEKIQSAQINR
P63132/241-330            LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYVMSNLFSILRGDSDLNSKRMLTPETTKEIKLVEEKIQSAQINR
P10266/241-330            LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSQRILTPEATKEIKLVEEKIQSAQINR
P63133/241-330            LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIQPTLGIPTYAMSNLFSILRGDSDLNSKRILTPEATKEIKLVEEKIQSAQINR
P63136/241-330            LGMQIENRKIKPQKIEIRKDTLKALNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRMLTPEATKEIKLVEEKIQSAQINR
V9H0H3/1164-1253          LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRILTPEATKEIKLVEEKIQSAQINR
Q0PKG6/241-330            LGMQIENRKIKPQKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSQRILTPEATKEIKLVEEKIQSAQINR
Q69013/217-306            LEMQIENRKIKPPKIEIRKDTLKTLNDFQKLLGDINWIRPTLGIPTYAMSNVFSILRGDSDLNSKRMLTPEATKEIKLVEEKIQSAQINR
#=GC scorecons            969999999997699999999998999999999999998999999997999799999999999979699997999999999999999999
#=GC scorecons_70         ******************************************************************************************
#=GC scorecons_80         *_**********_*****************************************************_***********************
#=GC scorecons_90         *_*********__**********************************_***_************_*_****_******************
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