# STOCKHOLM 1.0
#=GF ID 3.30.450.40/FF/30383
#=GF DE Chemotaxis protein CheD
#=GF AC 3.30.450.40/FF/30383
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 42.878
#=GS Q54A85/491-685       AC Q54A85
#=GS Q54A85/491-685       OS Synechocystis sp. PCC 6803
#=GS Q54A85/491-685       DE Photoreceptor for positive phototaxis PixJ1
#=GS Q54A85/491-685       DR GENE3D; 456dd31e50fc47e704a70383c3498c21/491-685; 
#=GS Q54A85/491-685       DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS Q55434/929-1090      AC Q55434
#=GS Q55434/929-1090      OS Synechocystis sp. PCC 6803 substr. Kazusa
#=GS Q55434/929-1090      DE Phytochrome-like protein cph2
#=GS Q55434/929-1090      DR GENE3D; 46af2c010eae44c4b4ab2ffe41468ab1/929-1090; 
#=GS Q55434/929-1090      DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS Q55434/929-1090      DR GO; GO:0009585; GO:0009883; GO:0018298; 
#=GS L8AMG6/929-1090      AC L8AMG6
#=GS L8AMG6/929-1090      OS Bacillus subtilis BEST7613
#=GS L8AMG6/929-1090      DE Uncharacterized protein
#=GS L8AMG6/929-1090      DR GENE3D; 46af2c010eae44c4b4ab2ffe41468ab1/929-1090; 
#=GS L8AMG6/929-1090      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A068MUI5/930-1091  AC A0A068MUI5
#=GS A0A068MUI5/930-1091  OS Synechocystis sp. PCC 6714
#=GS A0A068MUI5/930-1091  DE Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S)
#=GS A0A068MUI5/930-1091  DR GENE3D; f43817ae11397396245423963071505f/930-1091; 
#=GS A0A068MUI5/930-1091  DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6714; 
#=GS Q55445/491-685       AC Q55445
#=GS Q55445/491-685       OS Synechocystis sp. PCC 6803 substr. Kazusa
#=GS Q55445/491-685       DE Putative methyl-accepting chemotaxis protein sll0041
#=GS Q55445/491-685       DR GENE3D; 456dd31e50fc47e704a70383c3498c21/491-685; 
#=GS Q55445/491-685       DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS L8APY0/491-685       AC L8APY0
#=GS L8APY0/491-685       OS Bacillus subtilis BEST7613
#=GS L8APY0/491-685       DE Chemotaxis protein CheD
#=GS L8APY0/491-685       DR GENE3D; 456dd31e50fc47e704a70383c3498c21/491-685; 
#=GS L8APY0/491-685       DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GF TC 296.6 8.0E-93
#=GF SQ 6
Q54A85/491-685               AQQAQILKELTLKISAAINSEQVFDIAAQEIRLALKADRVIVYRFDATWAGTVIVESVAEGYPKALGATIADPCFADSYVEKYRSGRIQATRDIYNAGLTPCHIGQLKPFEVKANLVAPINYKGNLLGLLIAHQCSGPRDWHQNEIDLFGQLTVQVGLALERSDLLAQQKIAEVEQRQMREKMQKRALELLMEVD
Q55434/929-1090              --------KIANKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFNSQWSGQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLADCHKELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAIHQGELYEQ-------------------------LE
L8AMG6/929-1090              --------KIANKIRASLNINDILYSTVTEVRQFLNTDRVVLFKFNSQWSGQVVTESHNDFCRSIINDEIDDPCFKGHYLRLYREGRVRAVSDIEKADLADCHKELLRHYQVKANLVVPVVFNENLWGLLIAHECKTPRYWQEEDLQLLMELATQVAIAIHQGELYEQ-------------------------LE
A0A068MUI5/930-1091          --------KIANKIRASLNINDILHSTVTEVRQFLNTDRVVLFKFNSQWSGRVQTESHNDFCQSIINQEIDDPCFKGHYLRLYREGRVRAISDIEMADLAECHRELLRHYQVKANLVVPVVFNENLWGLLIAHECKSPRYWQEDDLQLLMELATQVAIAIHQGELYEQ-------------------------LE
Q55445/491-685               AQQAQILKELTLKISAAINSEQVFDIAAQEIRLALKADRVIVYRFDATWAGTVIVESVAEGYPKALGATIADPCFADSYVEKYRSGRIQATRDIYNAGLTPCHIGQLKPFEVKANLVAPINYKGNLLGLLIAHQCSGPRDWHQNEIDLFGQLTVQVGLALERSDLLAQQKIAEVEQRQMREKMQKRALELLMEVD
L8APY0/491-685               AQQAQILKELTLKISAAINSEQVFDIAAQEIRLALKADRVIVYRFDATWAGTVIVESVAEGYPKALGATIADPCFADSYVEKYRSGRIQATRDIYNAGLTPCHIGQLKPFEVKANLVAPINYKGNLLGLLIAHQCSGPRDWHQNEIDLFGQLTVQVGLALERSDLLAQQKIAEVEQRQMREKMQKRALELLMEVD
#=GC scorecons               111111115664995956955566456559694495699966769655959494599456364556545959999555965499599669559934959649935496576999999596475599499999969549949665665964696599569656569559111111111111111111111111166
#=GC scorecons_70            ____________**_*__*___*______***__*__****_***___*_*_*__**__*_________*_****___*___**_***_*__**__*_*__**___**_*_******_**_*__**_******_*__**_**__*__*___*__**__*____**__*__________________________*
#=GC scorecons_80            ____________**_*__*__________*_*__*__***__*_*___*_*_*__**____________*_****___*___**_**__*__**__*_*__**___*__*_******_*__*__**_******_*__**_*______*___*__**__*_____*__*___________________________
#=GC scorecons_90            ____________**_*__*__________*_*__*__***____*___*_*_*__**____________*_****___*___**_**__*__**__*_*__**___*____******_*_____**_******_*__**_*______*___*__**__*_____*__*___________________________
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