# STOCKHOLM 1.0
#=GF ID 3.30.450.20/FF/15714
#=GF DE Germ cell-expressed bHLH-PAS, isoform C
#=GF AC 3.30.450.20/FF/15714
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 25.011
#=GS Q9VXW7/353-526  AC Q9VXW7
#=GS Q9VXW7/353-526  OS Drosophila melanogaster
#=GS Q9VXW7/353-526  DE Germ cell-expressed bHLH-PAS, isoform C
#=GS Q9VXW7/353-526  DR GENE3D; 57e768fe715f2b567a41387b0e767089/353-526; 
#=GS Q9VXW7/353-526  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9VXW7/353-526  DR GO; GO:0003700; GO:0004880; GO:0005500; GO:0005634; GO:0006355; GO:0008134; GO:0010906; GO:0035626; GO:0043069; GO:0045944; GO:0046982; 
#=GS B3MR82/395-569  AC B3MR82
#=GS B3MR82/395-569  OS Drosophila ananassae
#=GS B3MR82/395-569  DE Uncharacterized protein
#=GS B3MR82/395-569  DR GENE3D; 130e20302b5dbd445905306dcb273e04/395-569; 
#=GS B3MR82/395-569  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS Q29JD8/114-288  AC Q29JD8
#=GS Q29JD8/114-288  OS Drosophila pseudoobscura pseudoobscura
#=GS Q29JD8/114-288  DE Uncharacterized protein
#=GS Q29JD8/114-288  DR GENE3D; 29306a0fdbaf97644fec1c834ad821fd/114-288; 
#=GS Q29JD8/114-288  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4L5Q0/373-547  AC B4L5Q0
#=GS B4L5Q0/373-547  OS Drosophila mojavensis
#=GS B4L5Q0/373-547  DE Uncharacterized protein
#=GS B4L5Q0/373-547  DR GENE3D; 44a63ebeeea1188db730f3c570fe95fe/373-547; 
#=GS B4L5Q0/373-547  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4ILF8/51-224   AC B4ILF8
#=GS B4ILF8/51-224   OS Drosophila sechellia
#=GS B4ILF8/51-224   DE GM19712
#=GS B4ILF8/51-224   DR GENE3D; 66ccce61b916437856923c21a3d3abc7/51-224; 
#=GS B4ILF8/51-224   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4JX85/370-544  AC B4JX85
#=GS B4JX85/370-544  OS Drosophila grimshawi
#=GS B4JX85/370-544  DE GH17616
#=GS B4JX85/370-544  DR GENE3D; 700b00fe5fbc69518f05770bc1c0bbdd/370-544; 
#=GS B4JX85/370-544  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4M788/352-526  AC B4M788
#=GS B4M788/352-526  OS Drosophila virilis
#=GS B4M788/352-526  DE Uncharacterized protein
#=GS B4M788/352-526  DR GENE3D; c5fc5c03fd85c3f6c2312bed2597ebd3/352-526; 
#=GS B4M788/352-526  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4N211/394-567  AC B4N211
#=GS B4N211/394-567  OS Drosophila willistoni
#=GS B4N211/394-567  DE Uncharacterized protein
#=GS B4N211/394-567  DR GENE3D; ca669dca32c5aff14c8a2c24938fdece/394-567; 
#=GS B4N211/394-567  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B4R561/98-271   AC B4R561
#=GS B4R561/98-271   OS Drosophila simulans
#=GS B4R561/98-271   DE GD17204
#=GS B4R561/98-271   DR GENE3D; d55a654e3086d52dec8bf1436a8558b3/98-271; 
#=GS B4R561/98-271   DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF TC 381.4 2.3E-118
#=GF SQ 9
Q9VXW7/353-526          DSFFLTLTCHGHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQNMLKQQLIPTELENLFDAH-GD-SDAEGEPRQRSKAEEDAIDRKLREDRRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDEAPRGVRSNHFSSNLQLIRRTRGRDDV-IPLHTISGNDIILTGCARIIRPP
B3MR82/395-569          DSFFLTLTCHGHILLISSSIEQHLGHCQTDLYGQSIMQITHPEDQTMLKQQLIPTELENLFDAH-PD-ADAEGEPRQRSKAEEEYIDRKLHEDRRSFRVRLARAGPRSEATTYEVVKIDGCFRRSDEAPRGVRSNTFTSSLQLIRRTRSRDDATIPLHTISGNDIVLTACARIIRPP
Q29JD8/114-288          DSFFLTVTCHGHILLISSSIEQHLGHCQTDLYGQSIMQITHPEDQNMLKQQLIPTELENLFDVHAAD-SEADGEPRLRSKSEEDYIDRKLREDRRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDDAPRGVRSSTFSSSLQLIRRTRGRDDV-IPLHTISGNDIVLTGCARIIRPP
B4L5Q0/373-547          DSFFLTLTCHGQIVLISSSIEQHLGHCQTDLYGQSILQITHPEDHEMLKQQLIPTELENLFDAH-AEPTDADGEPRQRSKSEEDYIDRKLRDDRRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDEAPRGVRSNTFSSSLQLIRRTRGRDDA-IPLHTISGNDIVLTACARIIRPP
B4ILF8/51-224           DSFFLTLTCHGHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQNMLKQQLIPTELENLFDAH-GD-SDAEGEPRQRSKAEEDAIDRKLREDRRSFRVRLARAGPRSEPTAYEVIKIDGCFRRSDEAPRGIRSNHFSSNLQLIRRTRGRDDV-IPLHTISGNDIILTGCARIIRPP
B4JX85/370-544          DSFFLTLTCHGQILLISPSIEQHLGHCQTDLYGQSILQIAHPEDHEMLKQQLIPTELENLFDAH-ADPTDDDGEPRQRSKSEEDYIDRKLRDDRRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDEAPRGVRSNTFSSSLQLIRRTRGRDDA-IPLHTISGNDIVLTALARIIRPP
B4M788/352-526          DSFFLTLTCHGQILLISSSIEQHLGHCQTDLYGQSILQITHPEDHEMLKQQLIPTELENLFDAH-AEPTDADGEPRQRSKSEEDYIDRKLRDDRRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDEAPRGIRSNTFSSSLQLIRRTRGRDDA-IPLHTISGNDIVLTACARIIRPP
B4N211/394-567          DSFFLTLTCHGQILLISSSIEQHLGHCQTDLYGQSIMQITHPEDQNMLKQQLIPTELENLFDAH-TD-SDADGEPRQRSKTEEDYIDRKLREDKRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDEAPRGVRSNTFSSSLQLIRRTRGRDDA-IPLHTISGNDIVLTACARIIRPP
B4R561/98-271           DSFFLTLTCHGHILLISASIEQHLGHCQSDLYGQSIMQITHPEDQNMLKQQLIPTELENLFDAH-GD-SDAEGEPRQRSKAEEDAIDRKLREDRRSFRVRLARAGPRSEPTAYEVVKIDGCFRRSDEAPRGIRSNHFSSNLQLIRRTRGRDDV-IPLHTISGNDIILTGCARIIRPP
#=GC scorecons          999999799996979995999999999969999999699799996599999999999999997904705876999979995998599999779899999999999999979799989999999999899997997597969999999979995099999999999799579999999
#=GC scorecons_70       *****************_***************************_******************__*__***********_***_**************************************************_****************__**************_********
#=GC scorecons_80       ***********_*****_**********_*******_*******__******************__*__**_****_***_***_**************************************************_***_************__**************__*******
#=GC scorecons_90       ******_****_*_***_**********_*******_**_****__****************_*________****_***_**__*****__*****************_*_**************_****_**__*_*_********_***__***********_**__*******
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