# STOCKHOLM 1.0
#=GF ID 3.30.420.140/FF/63
#=GF DE Putative Holliday junction resolvase
#=GF AC 3.30.420.140/FF/63
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 6.437
#=GS Q8G5X0/1-152      AC Q8G5X0
#=GS Q8G5X0/1-152      OS Bifidobacterium longum NCC2705
#=GS Q8G5X0/1-152      DE Putative pre-16S rRNA nuclease
#=GS Q8G5X0/1-152      DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS Q8G5X0/1-152      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; 
#=GS I3AZC3/1-145      AC I3AZC3
#=GS I3AZC3/1-145      OS Bifidobacterium longum subsp. longum 35B
#=GS I3AZC3/1-145      DE Putative pre-16S rRNA nuclease
#=GS I3AZC3/1-145      DR GENE3D; 2c995658629d84bb5a0bdac3a683169c/1-145; 
#=GS I3AZC3/1-145      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS A0A0M4NDJ2/1-145  AC A0A0M4NDJ2
#=GS A0A0M4NDJ2/1-145  OS Bifidobacterium longum
#=GS A0A0M4NDJ2/1-145  DE Putative pre-16S rRNA nuclease
#=GS A0A0M4NDJ2/1-145  DR GENE3D; 2c995658629d84bb5a0bdac3a683169c/1-145; 
#=GS A0A0M4NDJ2/1-145  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; 
#=GS F8AQT6/1-145      AC F8AQT6
#=GS F8AQT6/1-145      OS Bifidobacterium longum subsp. longum KACC 91563
#=GS F8AQT6/1-145      DE Putative pre-16S rRNA nuclease
#=GS F8AQT6/1-145      DR GENE3D; 2c995658629d84bb5a0bdac3a683169c/1-145; 
#=GS F8AQT6/1-145      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS E8MI05/1-145      AC E8MI05
#=GS E8MI05/1-145      OS Bifidobacterium longum subsp. longum JCM 1217
#=GS E8MI05/1-145      DE Putative pre-16S rRNA nuclease
#=GS E8MI05/1-145      DR GENE3D; 2c995658629d84bb5a0bdac3a683169c/1-145; 
#=GS E8MI05/1-145      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS E8MT23/1-145      AC E8MT23
#=GS E8MT23/1-145      OS Bifidobacterium longum subsp. infantis 157F
#=GS E8MT23/1-145      DE Putative pre-16S rRNA nuclease
#=GS E8MT23/1-145      DR GENE3D; 2c995658629d84bb5a0bdac3a683169c/1-145; 
#=GS E8MT23/1-145      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. infantis; 
#=GS I3BAS4/1-145      AC I3BAS4
#=GS I3BAS4/1-145      OS Bifidobacterium longum subsp. longum 44B
#=GS I3BAS4/1-145      DE Putative pre-16S rRNA nuclease
#=GS I3BAS4/1-145      DR GENE3D; 2c995658629d84bb5a0bdac3a683169c/1-145; 
#=GS I3BAS4/1-145      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS A0A0M0VMI2/1-152  AC A0A0M0VMI2
#=GS A0A0M0VMI2/1-152  OS Bifidobacterium longum subsp. longum
#=GS A0A0M0VMI2/1-152  DE Putative pre-16S rRNA nuclease
#=GS A0A0M0VMI2/1-152  DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS A0A0M0VMI2/1-152  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS A0A075N913/1-152  AC A0A075N913
#=GS A0A075N913/1-152  OS Bifidobacterium longum
#=GS A0A075N913/1-152  DE Putative pre-16S rRNA nuclease
#=GS A0A075N913/1-152  DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS A0A075N913/1-152  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; 
#=GS B3DSE2/1-152      AC B3DSE2
#=GS B3DSE2/1-152      OS Bifidobacterium longum DJO10A
#=GS B3DSE2/1-152      DE Putative pre-16S rRNA nuclease
#=GS B3DSE2/1-152      DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS B3DSE2/1-152      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; 
#=GS R5N1X3/1-152      AC R5N1X3
#=GS R5N1X3/1-152      OS Bifidobacterium longum CAG:69
#=GS R5N1X3/1-152      DE Putative pre-16S rRNA nuclease
#=GS R5N1X3/1-152      DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS R5N1X3/1-152      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum CAG:69; 
#=GS A0A083XWA3/1-152  AC A0A083XWA3
#=GS A0A083XWA3/1-152  OS Bifidobacterium longum subsp. longum EK13
#=GS A0A083XWA3/1-152  DE Putative pre-16S rRNA nuclease
#=GS A0A083XWA3/1-152  DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS A0A083XWA3/1-152  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS A0A0A0UAA6/1-152  AC A0A0A0UAA6
#=GS A0A0A0UAA6/1-152  OS Bifidobacterium longum subsp. longum GT15
#=GS A0A0A0UAA6/1-152  DE Putative pre-16S rRNA nuclease
#=GS A0A0A0UAA6/1-152  DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS A0A0A0UAA6/1-152  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS A0A087BG26/1-152  AC A0A087BG26
#=GS A0A087BG26/1-152  OS Bifidobacterium longum subsp. suis
#=GS A0A087BG26/1-152  DE Putative pre-16S rRNA nuclease
#=GS A0A087BG26/1-152  DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS A0A087BG26/1-152  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. suis; 
#=GS E5XXC6/1-152      AC E5XXC6
#=GS E5XXC6/1-152      OS Bifidobacterium sp. 12_1_47BFAA
#=GS E5XXC6/1-152      DE Putative pre-16S rRNA nuclease
#=GS E5XXC6/1-152      DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS E5XXC6/1-152      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium sp. 12_1_47BFAA; 
#=GS A0A083X0N1/1-152  AC A0A083X0N1
#=GS A0A083X0N1/1-152  OS Bifidobacterium longum subsp. longum 17-1B
#=GS A0A083X0N1/1-152  DE Putative pre-16S rRNA nuclease
#=GS A0A083X0N1/1-152  DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS A0A083X0N1/1-152  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS C2GTK7/1-152      AC C2GTK7
#=GS C2GTK7/1-152      OS Bifidobacterium longum subsp. longum ATCC 55813
#=GS C2GTK7/1-152      DE Putative pre-16S rRNA nuclease
#=GS C2GTK7/1-152      DR GENE3D; 305d5111e18f42ab6a5cffdf8a3716c9/1-152; 
#=GS C2GTK7/1-152      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS D6ZTY1/5-156      AC D6ZTY1
#=GS D6ZTY1/5-156      OS Bifidobacterium longum subsp. longum JDM301
#=GS D6ZTY1/5-156      DE Putative pre-16S rRNA nuclease
#=GS D6ZTY1/5-156      DR GENE3D; 57cb091ccb04a3fb1c771c521e37424f/5-156; 
#=GS D6ZTY1/5-156      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS C5EAN5/5-156      AC C5EAN5
#=GS C5EAN5/5-156      OS Bifidobacterium longum subsp. infantis CCUG 52486
#=GS C5EAN5/5-156      DE Putative pre-16S rRNA nuclease
#=GS C5EAN5/5-156      DR GENE3D; 57cb091ccb04a3fb1c771c521e37424f/5-156; 
#=GS C5EAN5/5-156      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. infantis; 
#=GS V6XW02/5-155      AC V6XW02
#=GS V6XW02/5-155      OS Bifidobacterium longum E18
#=GS V6XW02/5-155      DE Putative pre-16S rRNA nuclease
#=GS V6XW02/5-155      DR GENE3D; 90631123c52896747b4f5ab7f2890a9a/5-155; 
#=GS V6XW02/5-155      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; 
#=GS A0A0A6VGV5/1-151  AC A0A0A6VGV5
#=GS A0A0A6VGV5/1-151  OS Bifidobacterium longum subsp. longum
#=GS A0A0A6VGV5/1-151  DE Putative pre-16S rRNA nuclease
#=GS A0A0A6VGV5/1-151  DR GENE3D; ba9d0c3adaa4d3102b14c2b5b20407b6/1-151; 
#=GS A0A0A6VGV5/1-151  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GS A0A083XTV3/1-151  AC A0A083XTV3
#=GS A0A083XTV3/1-151  OS Bifidobacterium longum subsp. infantis EK3
#=GS A0A083XTV3/1-151  DE Putative pre-16S rRNA nuclease
#=GS A0A083XTV3/1-151  DR GENE3D; e077b7ae8aa5a28b5697c6d02a31f2dc/1-151; 
#=GS A0A083XTV3/1-151  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. infantis; 
#=GS B7GSA0/1-151      AC B7GSA0
#=GS B7GSA0/1-151      OS Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088
#=GS B7GSA0/1-151      DE Putative pre-16S rRNA nuclease
#=GS B7GSA0/1-151      DR GENE3D; e077b7ae8aa5a28b5697c6d02a31f2dc/1-151; 
#=GS B7GSA0/1-151      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. infantis; 
#=GS T2I310/1-151      AC T2I310
#=GS T2I310/1-151      OS Bifidobacterium longum subsp. longum CECT 7347
#=GS T2I310/1-151      DE Putative pre-16S rRNA nuclease
#=GS T2I310/1-151      DR GENE3D; e077b7ae8aa5a28b5697c6d02a31f2dc/1-151; 
#=GS T2I310/1-151      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium longum; Bifidobacterium longum subsp. longum; 
#=GF TC 335.4 1.2E-104
#=GF SQ 24
Q8G5X0/1-152              MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
I3AZC3/1-145              -------MGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
A0A0M4NDJ2/1-145          -------MGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
F8AQT6/1-145              -------MGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
E8MI05/1-145              -------MGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
E8MT23/1-145              -------MGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
I3BAS4/1-145              -------MGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
A0A0M0VMI2/1-152          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
A0A075N913/1-152          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
B3DSE2/1-152              MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
R5N1X3/1-152              MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
A0A083XWA3/1-152          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
A0A0A0UAA6/1-152          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
A0A087BG26/1-152          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
E5XXC6/1-152              MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
A0A083X0N1/1-152          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
C2GTK7/1-152              MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
D6ZTY1/5-156              VVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
C5EAN5/5-156              VVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTREQ
V6XW02/5-155              VVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTRE-
A0A0A6VGV5/1-151          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHRASNKHRPVVDQQSAVVILQTALDRTRE-
A0A083XTV3/1-151          MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTRE-
B7GSA0/1-151              MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTRE-
T2I310/1-151              MVWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFEAHKASNKHRPVVDQQSAVVILQTALDRTRE-
#=GC scorecons            22222226999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999989999999999999999999999999995
#=GC scorecons_70         _______************************************************************************************************************************************************_
#=GC scorecons_80         ________***********************************************************************************************************************************************_
#=GC scorecons_90         ________***********************************************************************************************************************************************_
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