# STOCKHOLM 1.0 #=GF ID 3.30.420.140/FF/3076 #=GF DE Putative Holliday junction resolvase #=GF AC 3.30.420.140/FF/3076 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 60.712 #=GS M4S4V3/16-153 AC M4S4V3 #=GS M4S4V3/16-153 OS Sphingomonas sp. MM-1 #=GS M4S4V3/16-153 DE Putative pre-16S rRNA nuclease #=GS M4S4V3/16-153 DR GENE3D; 0327aef125eb2f3966de25b1d5323928/16-153; #=GS M4S4V3/16-153 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. MM-1; #=GS A0A1E4JJD7/16-152 AC A0A1E4JJD7 #=GS A0A1E4JJD7/16-152 OS Sphingopyxis sp. SCN 67-31 #=GS A0A1E4JJD7/16-152 DE Putative pre-16S rRNA nuclease #=GS A0A1E4JJD7/16-152 DR GENE3D; 10f8e977716b82255bbad61b0929a22b/16-152; #=GS A0A1E4JJD7/16-152 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis sp. SCN 67-31; #=GS N9UT87/16-152 AC N9UT87 #=GS N9UT87/16-152 OS Sphingopyxis sp. MC1 #=GS N9UT87/16-152 DE Putative pre-16S rRNA nuclease #=GS N9UT87/16-152 DR GENE3D; 1cd7deb685758d30d92124f8ec3400d3/16-152; #=GS N9UT87/16-152 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis sp. MC1; #=GS A0A0Q8RKN6/16-151 AC A0A0Q8RKN6 #=GS A0A0Q8RKN6/16-151 OS Sphingomonas sp. Root720 #=GS A0A0Q8RKN6/16-151 DE Putative pre-16S rRNA nuclease #=GS A0A0Q8RKN6/16-151 DR GENE3D; 3f152391420e39121c937de21874ee71/16-151; #=GS A0A0Q8RKN6/16-151 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. Root720; #=GS A0A0W1IEG3/16-152 AC A0A0W1IEG3 #=GS A0A0W1IEG3/16-152 OS Sphingopyxis sp. A083 #=GS A0A0W1IEG3/16-152 DE Putative pre-16S rRNA nuclease #=GS A0A0W1IEG3/16-152 DR GENE3D; 6521496a9d15f06cf634c51b97bf7bd2/16-152; #=GS A0A0W1IEG3/16-152 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis sp. A083; #=GS A0A1E4JL19/16-153 AC A0A1E4JL19 #=GS A0A1E4JL19/16-153 OS Sphingopyxis sp. SCN 67-31 #=GS A0A1E4JL19/16-153 DE Putative pre-16S rRNA nuclease #=GS A0A1E4JL19/16-153 DR GENE3D; 6ae7dac8e561cbd5627fb399edfafd4e/16-153; #=GS A0A1E4JL19/16-153 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis sp. SCN 67-31; #=GS A0A0M4CTS8/33-169 AC A0A0M4CTS8 #=GS A0A0M4CTS8/33-169 OS Sphingopyxis sp. 113P3 #=GS A0A0M4CTS8/33-169 DE Putative pre-16S rRNA nuclease #=GS A0A0M4CTS8/33-169 DR GENE3D; 87b9f9ef23133036701a20cf23a1c1a1/33-169; #=GS A0A0M4CTS8/33-169 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis sp. 113P3; #=GS A5V3V3/16-151 AC A5V3V3 #=GS A5V3V3/16-151 OS Sphingomonas wittichii RW1 #=GS A5V3V3/16-151 DE Putative pre-16S rRNA nuclease #=GS A5V3V3/16-151 DR GENE3D; 8885d4956fc69edd9cd52d2697761d60/16-151; #=GS A5V3V3/16-151 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas wittichii; #=GS F8EVG1/37-173 AC F8EVG1 #=GS F8EVG1/37-173 OS Zymomonas mobilis subsp. pomaceae ATCC 29192 #=GS F8EVG1/37-173 DE Putative pre-16S rRNA nuclease #=GS F8EVG1/37-173 DR GENE3D; 8c65da196735e8b933388afc72d7c3ac/37-173; #=GS F8EVG1/37-173 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas; Zymomonas mobilis; Zymomonas mobilis subsp. pomaceae; #=GS Q2G9X2/17-154 AC Q2G9X2 #=GS Q2G9X2/17-154 OS Novosphingobium aromaticivorans DSM 12444 #=GS Q2G9X2/17-154 DE Putative pre-16S rRNA nuclease #=GS Q2G9X2/17-154 DR GENE3D; 94d81923727ef7863c7c25ccee3f15d5/17-154; #=GS Q2G9X2/17-154 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium; Novosphingobium aromaticivorans; #=GS A0A0H3G0Q8/42-178 AC A0A0H3G0Q8 #=GS A0A0H3G0Q8/42-178 OS Zymomonas mobilis subsp. mobilis ATCC 10988 #=GS A0A0H3G0Q8/42-178 DE Putative pre-16S rRNA nuclease #=GS A0A0H3G0Q8/42-178 DR GENE3D; 9d589571b139cf3e14b20774b0e79978/42-178; #=GS A0A0H3G0Q8/42-178 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas; Zymomonas mobilis; Zymomonas mobilis subsp. mobilis; #=GS Q1GUM9/16-152 AC Q1GUM9 #=GS Q1GUM9/16-152 OS Sphingopyxis alaskensis RB2256 #=GS Q1GUM9/16-152 DE Putative pre-16S rRNA nuclease #=GS Q1GUM9/16-152 DR GENE3D; 9e54c6fa7c85b5914c178425f548530f/16-152; #=GS Q1GUM9/16-152 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis alaskensis; #=GS Q5NPF1/26-162 AC Q5NPF1 #=GS Q5NPF1/26-162 OS Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 #=GS Q5NPF1/26-162 DE Putative pre-16S rRNA nuclease #=GS Q5NPF1/26-162 DR GENE3D; ac4081cb530077e40d747498a3165b7e/26-162; #=GS Q5NPF1/26-162 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas; Zymomonas mobilis; Zymomonas mobilis subsp. mobilis; #=GS A0A0W1G531/16-152 AC A0A0W1G531 #=GS A0A0W1G531/16-152 OS Sphingopyxis sp. H071 #=GS A0A0W1G531/16-152 DE Putative pre-16S rRNA nuclease #=GS A0A0W1G531/16-152 DR GENE3D; aeacdaa5fcd71304d033fe0d898fc826/16-152; #=GS A0A0W1G531/16-152 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis sp. H071; #=GS A0A0Q8QJ52/16-151 AC A0A0Q8QJ52 #=GS A0A0Q8QJ52/16-151 OS Sphingomonas sp. Root710 #=GS A0A0Q8QJ52/16-151 DE Putative pre-16S rRNA nuclease #=GS A0A0Q8QJ52/16-151 DR GENE3D; be5a4c27d8769662fddf739454a4a9ad/16-151; #=GS A0A0Q8QJ52/16-151 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. Root710; #=GS A0A0F5PHA4/16-151 AC A0A0F5PHA4 #=GS A0A0F5PHA4/16-151 OS Sphingomonas sp. SRS2 #=GS A0A0F5PHA4/16-151 DE Putative pre-16S rRNA nuclease #=GS A0A0F5PHA4/16-151 DR GENE3D; c053b14bff49b1360afe34747305a3a3/16-151; #=GS A0A0F5PHA4/16-151 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. SRS2; #=GS A0A142W2H1/16-152 AC A0A142W2H1 #=GS A0A142W2H1/16-152 OS Sphingopyxis terrae NBRC 15098 #=GS A0A142W2H1/16-152 DE Putative pre-16S rRNA nuclease #=GS A0A142W2H1/16-152 DR GENE3D; cbf66c9ce32c31a96667216de7ef06f5/16-152; #=GS A0A142W2H1/16-152 DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis; Sphingopyxis terrae; #=GF TC 243.4 3.0E-76 #=GF SQ 17 M4S4V3/16-153 GGRLAGLDVGTKTIGVALCDAMWTIASPAELIERRKFTVDLARLRDFCKAQGVRGLVVGLPLNMDGSDSPRTQSVRAFVRNLEPLGLPVLLWDERWSTAAVTRTLLEADASRARRAELVDKMAAAYILQGAIDALTRG- A0A1E4JJD7/16-152 GGRLVGLDVGTKTIGVALCDAGWSFATPDKTIVRKKFTVDFEALKALIAAQSVVGIVVGLPLNMDGSDSPRTQSTRAFARNLAPLALPLLLWDERWSTAAVERAMIAADVSRAKRAERVDSAAAAFILQGAIDALVR-- N9UT87/16-152 GGRLVGLDVGTKTIGVALCDAGWSFATPDKTIVRKKFTVDFEALKALIAAQSVVGIVVGLPLNMDGSDSPRTQSTRAFARNLTPLALPLLLWDERWSTAAVERAMIAADISRAKRAERVDSAAAAFILQGAIDALVR-- A0A0Q8RKN6/16-151 RGRLAGLDVGTKTIGVAFCDAGWTIASPAETIRRTKFSVDAAKLRALLAAQLVKGLVIGLPLNLDGSDSPRTQSVRAFARNVEGFGLPILLWDERWSTQAVTRTLLDADASRARRAELVDKLAAAYILQGAIDAMI--- A0A0W1IEG3/16-152 GGRLVGLDVGTKTIGVALCDAGWSFATPDKTIVRKKFTVDFEALKALIAAQSVVGIVVGLPLNMDGSDSPRTQSTRAFARNLAPLALPLLLWDERWSTAAVERAMIAADVSRAKRAERVDSAAAAFILQGAIDALAR-- A0A1E4JL19/16-153 GGRLAGLDVGTKTIGVALCDAGWSFATPDRTIRRGKFAADLDALRGLVAAQSVVGLVVGLPLNMDGSDSPRTQSVRAFARNLAPLGLPVLLWDERWSTAAVERAMIAADVSRAKRAERIDSAAAAFILQGAIDALVRA- A0A0M4CTS8/33-169 GGRLAGLDVGTRTIGTALCDAGWSFATPDKTIIRKKFAADLDALKALVAAQSVVGFVVGLPLNMDGSDSPRTQSVRAFARNLAPLALPVLLWDERWSTAAVERAMIAADVSRAKRAERIDSAAAAFILQGAIDAMVR-- A5V3V3/16-151 RGRLAGLDVGTRTIGVALCDAGWTIASPAETILRAKFSVDAAKLRALVAAQLVKGLVIGLPLNLDGSDSPRTQSVRAFARNVEPFGLPILLWDERWSTQAVTRTLLDADASRARRAELVDKLAAAYILQGAIDAMI--- F8EVG1/37-173 GGRLAGLDVGTKTIGLAVCDSQWIIASPSETIRRKKFTLDFELLKQFITKQQIKGLVIGLPLSLDGTDSPRTQSVRAFSRNMEPLGLPVLMWDERWSTKAVTRTLLEADASRARRSEVVDKMAAAYILQGAIDSFAM-- Q2G9X2/17-154 -GSLIGLDTGTKTIGVALCDREWRFATAGTTIRRTKFAADKAQIRAIVAERGVKGIVIGLPLNMDGSESPRSQGARAMARNLEDLGLPILLWDERWTTQAAERAMIEQDFSRAKRAERIDSHAAALILQGAIDALAGSA A0A0H3G0Q8/42-178 KGRLAGLDVGTKTIGLALCDSQWIIASPAETIRRKKFTLDLELLRQFVEKQQVKGLVIGLPLNLDGSDSPRTQSVRAFAKNVAPLSLPVLMWDERWSTKAVTRTLLEADASRARRSEVVDKMAAAYILQGAIDSFAM-- Q1GUM9/16-152 GGRLAGLDVGTKTIGVALCDAGWSFASPDKTIVRKRFSADLDALKALVAGQAVVGLVVGLPLNMDGSDSPRTQSTRAFARNLAPLGLPVLLWDERWSTAAVERAMIAADVSRAKRAERIDSAAAAFILQGAIDAMTR-- Q5NPF1/26-162 KGRLAGLDVGTKTIGLALCDSQWIIASPAETIRRKKFTLDLELLRQFVEKQQVKGLVIGLPLNLDGSDSPRTQSVRAFAKNVAPLSLPVLMWDERWSTKAVTRTLLEADASRARRSEVVDKMAAAYILQGAIDSFAM-- A0A0W1G531/16-152 GGRLAGLDVGTKTIGVALCDAGWSFATPDKTIIRKKFSADLEALKAVFAAQSVVGLVVGLPLNMDGTDSPRTQSTRAFARNLLPLGLPILLWDERWSTAAVERAMIAADVSRAKRAERVDSAAAAFILQGAIDALTR-- A0A0Q8QJ52/16-151 RGRLAGLDVGTRTIGVALCDAGWTIASPAETIMRAKFSVDAAKLRALLTAQSAKGMVIGLPLNLDGSDSPRTQSVRAFARNVEGIGLPILLWDERWSTAAVTRTLIDADASRARRAELVDKLAAAYILQGAIDAMI--- A0A0F5PHA4/16-151 RGRLAGLDVGTKTIGIAICDAGWTIASPAETIQRAKFSVDAARLRTLLTAQSIKGMVIGLPLNLDGSDSPRTQSVRAFARNVEGIGLPILLWDERWSTAAVTRTLIDADASRARRAELVDKLAAAYILQGAIDGMI--- A0A142W2H1/16-152 GGRLMGLDVGTKTIGVALCDAGWSFATPDKTIVRKKFTVDLEALKALVAAQSVVGIVVGLPLNMDGSDSPRTQSTRAFARNLAPLALPLLLWDERWSTAAVERAMIAADVSRAKRAERVDSAAAAFILQGAIDALVR-- #=GC scorecons 4979699979979996979965945968458939489559453875655584749597999986997899989859977896456599697999998959859666479599979794795499969999999654200 #=GC scorecons_70 _***_***************__*__*_*__**_*_**__*___**_____*_*_*_******************_******___*_**_*********_**_****_**_*******_**__************_____ #=GC scorecons_80 _***_**********_****__*__*_*__**_*_**__*___*______*_*_*_*_*****_**********_******_____**_*********_**_*____**_***_*_*_**__***_*******______ #=GC scorecons_90 _*_*_***_**_***_*_**__*__*____**_*_**__*___*______*___*_*_*****_**_****_*__**__**_____**_*_*****_*_*__*_____*_***_*_*__*__***_*******______ //