# STOCKHOLM 1.0
#=GF ID 3.30.420.10/FF/8265
#=GF DE Integrase core domain protein
#=GF AC 3.30.420.10/FF/8265
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 68.837
#=GS Q9KTS1/134-295      AC Q9KTS1
#=GS Q9KTS1/134-295      OS Vibrio cholerae O1 biovar El Tor str. N16961
#=GS Q9KTS1/134-295      DE Transposase, putative
#=GS Q9KTS1/134-295      DR GENE3D; 235693a765f517f9ed538af0ce0c34ac/134-295; 
#=GS Q9KTS1/134-295      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS Q9KTS1/134-295      DR GO; GO:0004803; GO:0006313; 
#=GS A0A0X1KUN4/134-295  AC A0A0X1KUN4
#=GS A0A0X1KUN4/134-295  OS Vibrio cholerae MO10
#=GS A0A0X1KUN4/134-295  DE Transposase
#=GS A0A0X1KUN4/134-295  DR GENE3D; 235693a765f517f9ed538af0ce0c34ac/134-295; 
#=GS A0A0X1KUN4/134-295  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3PXB4/134-295  AC A0A0H3PXB4
#=GS A0A0H3PXB4/134-295  OS Vibrio cholerae B33
#=GS A0A0H3PXB4/134-295  DE Transposase
#=GS A0A0H3PXB4/134-295  DR GENE3D; 235693a765f517f9ed538af0ce0c34ac/134-295; 
#=GS A0A0H3PXB4/134-295  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0U3JAM2/134-295  AC A0A0U3JAM2
#=GS A0A0U3JAM2/134-295  OS Vibrio cholerae
#=GS A0A0U3JAM2/134-295  DE Putative transposase
#=GS A0A0U3JAM2/134-295  DR GENE3D; 235693a765f517f9ed538af0ce0c34ac/134-295; 
#=GS A0A0U3JAM2/134-295  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS C3LT70/134-295      AC C3LT70
#=GS C3LT70/134-295      OS Vibrio cholerae M66-2
#=GS C3LT70/134-295      DE ISVch1 transposase, IS481 group
#=GS C3LT70/134-295      DR GENE3D; 235693a765f517f9ed538af0ce0c34ac/134-295; 
#=GS C3LT70/134-295      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0H3AEN8/134-295  AC A0A0H3AEN8
#=GS A0A0H3AEN8/134-295  OS Vibrio cholerae O395
#=GS A0A0H3AEN8/134-295  DE Putative transposase
#=GS A0A0H3AEN8/134-295  DR GENE3D; 235693a765f517f9ed538af0ce0c34ac/134-295; 
#=GS A0A0H3AEN8/134-295  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio cholerae; 
#=GS A0A0E0U815/127-319  AC A0A0E0U815
#=GS A0A0E0U815/127-319  OS Escherichia coli UMNK88
#=GS A0A0E0U815/127-319  DE Putative transposase
#=GS A0A0E0U815/127-319  DR GENE3D; 4ef654640a3bce491dd9e4efc12f0fee/127-319; 
#=GS A0A0E0U815/127-319  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS V2PZC6/53-241       AC V2PZC6
#=GS V2PZC6/53-241       OS Acinetobacter lwoffii NCTC 5866 = CIP 64.10 = NIPH 512
#=GS V2PZC6/53-241       DE Uncharacterized protein
#=GS V2PZC6/53-241       DR GENE3D; 5a3bdf541a4c36a73357fbfed0c2c1bc/53-241; 
#=GS V2PZC6/53-241       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter lwoffii; 
#=GS N8PVN0/53-241       AC N8PVN0
#=GS N8PVN0/53-241       OS Acinetobacter sp. CIP A162
#=GS N8PVN0/53-241       DE Uncharacterized protein
#=GS N8PVN0/53-241       DR GENE3D; 5a3bdf541a4c36a73357fbfed0c2c1bc/53-241; 
#=GS N8PVN0/53-241       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter sp. CIP A162; 
#=GS V2UM35/128-317      AC V2UM35
#=GS V2UM35/128-317      OS Acinetobacter indicus CIP 110367
#=GS V2UM35/128-317      DE Uncharacterized protein
#=GS V2UM35/128-317      DR GENE3D; ad4d749b310c0bdc346dcd42e4363261/128-317; 
#=GS V2UM35/128-317      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter indicus; 
#=GS I9NYT6/130-319      AC I9NYT6
#=GS I9NYT6/130-319      OS Alishewanella agri BL06
#=GS I9NYT6/130-319      DE Putative transposase
#=GS I9NYT6/130-319      DR GENE3D; e0a5f93a9d6f60ecff01c73de5fa7823/130-319; 
#=GS I9NYT6/130-319      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella; Alishewanella agri; 
#=GS A0A0J1GWR2/130-293  AC A0A0J1GWR2
#=GS A0A0J1GWR2/130-293  OS Photobacterium aquae
#=GS A0A0J1GWR2/130-293  DE Integrase
#=GS A0A0J1GWR2/130-293  DR GENE3D; ebb313948d05c0aadc9e97f63738a347/130-293; 
#=GS A0A0J1GWR2/130-293  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium; Photobacterium aquae; 
#=GS L0RCZ5/128-319      AC L0RCZ5
#=GS L0RCZ5/128-319      OS Desulfovibrio hydrothermalis AM13 = DSM 14728
#=GS L0RCZ5/128-319      DE Transposase
#=GS L0RCZ5/128-319      DR GENE3D; f18d6236191c9d1320e8600e0afd470c/128-319; 
#=GS L0RCZ5/128-319      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; Desulfovibrio hydrothermalis; 
#=GS A0A109WBY0/128-318  AC A0A109WBY0
#=GS A0A109WBY0/128-318  OS Moraxella osloensis
#=GS A0A109WBY0/128-318  DE Integrase
#=GS A0A109WBY0/128-318  DR GENE3D; f3db7758ce2a64dc5c46d96701560e59/128-318; 
#=GS A0A109WBY0/128-318  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella; Moraxella osloensis; 
#=GS A0A1J0K5F9/57-220   AC A0A1J0K5F9
#=GS A0A1J0K5F9/57-220   OS Vibrio parahaemolyticus
#=GS A0A1J0K5F9/57-220   DE Mobile element protein
#=GS A0A1J0K5F9/57-220   DR GENE3D; ff10befd62bdd8503f8e1b725388627d/57-220; 
#=GS A0A1J0K5F9/57-220   DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio harveyi group; Vibrio parahaemolyticus; 
#=GS I1ZEU8/44-159       AC I1ZEU8
#=GS I1ZEU8/44-159       OS Vibrio alginolyticus
#=GS I1ZEU8/44-159       DE Putative transposase
#=GS I1ZEU8/44-159       DR GENE3D; 931f3808bf5ea92325f716c449417d00/44-159; 
#=GS I1ZEU8/44-159       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio harveyi group; Vibrio alginolyticus; 
#=GS B3VQ13/125-242      AC B3VQ13
#=GS B3VQ13/125-242      OS Vibrio alginolyticus
#=GS B3VQ13/125-242      DE Transposase
#=GS B3VQ13/125-242      DR GENE3D; 180a050b298cf323ee6b1e13918b5cd6/125-242; 
#=GS B3VQ13/125-242      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio; Vibrio harveyi group; Vibrio alginolyticus; 
#=GS I2JI96/64-222       AC I2JI96
#=GS I2JI96/64-222       OS gamma proteobacterium BDW918
#=GS I2JI96/64-222       DE Putative transposase
#=GS I2JI96/64-222       DR GENE3D; ef08adaa0b4f6be91d99684c63f296ff/64-222; 
#=GS I2JI96/64-222       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Cellvibrionales; Spongiibacteraceae; gamma proteobacterium BDW918; 
#=GF TC 252.9 9.4E-79
#=GF SQ 18
Q9KTS1/134-295              -------IPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLS----------------------------
A0A0X1KUN4/134-295          -------IPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLS----------------------------
A0A0H3PXB4/134-295          -------IPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLS----------------------------
A0A0U3JAM2/134-295          -------IPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLS----------------------------
C3LT70/134-295              -------IPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLS----------------------------
A0A0H3AEN8/134-295          -------IPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLS----------------------------
A0A0E0U815/127-319          --RYERPVPGDRVQMDTCKIGPGLYQYTSVDDCTRYRVLRLYSRRTAANTLDFIDCVIEEMPFPIQRLQTDRGREFFAVKMQEKLKEYSIKFRPNKPASPHLNGKVERSQKTDKAEFYATVDLST--DDLKELLAEWQHYYNWERHHSAHNGKTPMARYFELAEQTPHSDAVHTSYQPNEEHIQEQNYKLELELRKL
V2PZC6/53-241               ---YERPLPGDRIQMDTCKLGPGLYQYTSIDDCTRYRVLRIYKRRTAANTLDFLDCVIEEMPFPIQRIQTDRGREFFAEKVQKKMMQHGIKFRPNKPGSPHLNGKVERSQKTDKSEFYATVDIDS--EDIQDKLAEWQHYYNWMRPHSALKGKTPMERYFELCEETPFLDEVQKQYDPSNERIQHANYKMDLEI---
N8PVN0/53-241               ---YERPLPGDRIQMDTCKLGPGLYQYTSIDDCTRYRVLRIYKRRTAANTLDFLDCVIEEMPFPIQRIQTDRGREFFAEKVQKKMMQHGIKFRPNKPGSPHLNGKVERSQKTDKSEFYATVDIDS--EDIQDKLAEWQHYYNWMRPHSALKGKTPMERYFELCEETPFLDEVQKQYDPSNERIQHANYKMDLEI---
V2UM35/128-317              ---YERPLPGDRIQMDTCKLVPGLYQYTSIDDCTRYRVLRIYKRRTAANTLDFLDCVIEEMPFPIQRIQTDRGRKFFAEKVQKKLMQHGIKFRQNKPGSPHLNGKVERSQKTDKSEFYATVDINS--EDIQDKLAEWQHYYNWMRPHSALKGKTPMERYFELCEETPFSDEVQKQYNPSNERIQHSNYKMDLEIA--
I9NYT6/130-319              ---YVRPVPGDRIQMDTCKIGPNLYQYTSIDDCTRYRVLRLYSRRTAANTLDFIDCVIEEMPFPIQRIQTDRGREFFACKVQEKLKIHGIKFRPNKPASPHLNGKVERSQKTDKTEFYATVDLAS--DDLDSLLAEWQHYYNWERPHSAHHGKTPMERYFEMAEQTPYSEEVQELYEPAKEPLQEQNYRLELELR--
A0A0J1GWR2/130-293          -----RPISGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKKLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTINVSVGLEELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLS----------------------------
L0RCZ5/128-319              ---YERPIPGDRIQMDTCKIAPGQYQYTAIDDCTRYRVLRLYSRRTAKNTLDFIEATVEEMPFPIQRIQTDRGREFFAIDVQEMLKSYGIKFRPNRPASPHLNGKVERSQKTDKVEFYSTVDLSS--TDLDTLLAEWQHYYNWERSHSAHNGKTPIERYFQLLEKTPFSEGVAKDYHPDQEHIQEQNYRRELQLRKL
A0A109WBY0/128-318          ---YERPLPGDRVQMDTCKIASGLYQYTSIDDCTRYRVLRLYNRRTAANTLDFLDCVIEEMPFPIQRVQTDRGLEFFAEKVQKKMMEYGIKFRPNKPGSPHLNGKVERSQKTDKTEFYATVDITS--ENLQDQLAEWQHYYNWLRPHSALKGKTPMERYFELSEETPFSDEVQNQYNPSDERIQNANYKVDLEMAK-
A0A1J0K5F9/57-220           -------IPGDRVQMDTCKIAPGIYQYTAIDDCSRYRVLRCYSRRAAANTVDFIDCVMEEMPFPIQRIQTDRGREFFAEKVQKQLMISGVKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLEELDLLLAEWQHYYNWERPHSSLNGLTPIDSITEISDQTSLSEE--------------------------
I1ZEU8/44-159               FQRYERPIPGDRVHMNTCKIAPGIYHYTAIDDCSRYRVLRCCSRRTAANTVDFIDCVVEEIPFPIQRIQTDREREFFAEKVQKQLMIYGIKFRPNNPGSPHLNGKMELSQKTDKSE---------------------------------------------------------------------------------
B3VQ13/125-242              FQRYERPIPGDRVHMNTCKIAPGIYHYTAIDDCSRYRVLRCCSRRTAANTVDFIDCVVEEIPFPIQRIQTDREREFFAEKVQKQLMIYGIKFRPNNPGSPHLNGKMELSQKTDKSEFY-------------------------------------------------------------------------------
I2JI96/64-222               -------VPGDRVQMDTCKIGPNLYQYTSIDDCTRYRVLRLYKRRTAANTLDFIDAVMEEMPFPIQQIQTDRGREFFAAKVQKKLMDLGIKFRPNKPGSPRLNGKVERSQKTDKTEFYVAVDLSS--EELDDLLAEWQHYYNWDRPHGAHKGKTPMERYVELSEETPL-----------------------------
#=GC scorecons              00032336899977979997687597996899969999994769989899699787869979999988999978899958897576468899989697998999979699999969773545333003443235555555555354554335355445335434455331110001010010110011101110000
#=GC scorecons_70           _______*************_**_****_****_******_*_***********************************_****_**_***************************_***_______________________________________________________________________________
#=GC scorecons_80           ________************_**_****_****_******_*_*******_**_***_********************_****_*___*******_***********_******_***_______________________________________________________________________________
#=GC scorecons_90           ________****__*_***__*__*_**_****_******___*******_**_*_*_**_******_****__****_***______*******_*_*******_*_******_*_________________________________________________________________________________
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