# STOCKHOLM 1.0 #=GF ID 3.30.40.10/FF/61537 #=GF DE Peroxisome biogenesis factor 2 #=GF AC 3.30.40.10/FF/61537 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 76.560 #=GS Q9CA86/251-329 AC Q9CA86 #=GS Q9CA86/251-329 OS Arabidopsis thaliana #=GS Q9CA86/251-329 DE Peroxisome biogenesis protein 2 #=GS Q9CA86/251-329 DR GENE3D; c1a3bcb0caed4cc5082fc1333e10af8c/251-329; #=GS Q9CA86/251-329 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9CA86/251-329 DR GO; GO:0004842; GO:0005515; GO:0005777; GO:0005829; GO:0006513; GO:0006635; GO:0007031; GO:0009506; GO:0009640; GO:0016558; #=GS Q9VSH8/205-280 AC Q9VSH8 #=GS Q9VSH8/205-280 OS Drosophila melanogaster #=GS Q9VSH8/205-280 DE Peroxin 2 #=GS Q9VSH8/205-280 DR GENE3D; df1e1eaa903be8edc062a19469482d84/205-280; #=GS Q9VSH8/205-280 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; #=GS Q9VSH8/205-280 DR GO; GO:0000209; GO:0004842; GO:0005777; GO:0007031; GO:0007112; GO:0007285; GO:0007286; GO:0008270; GO:0016558; GO:0048137; #=GS O42845/175-250 AC O42845 #=GS O42845/175-250 OS Schizosaccharomyces pombe 972h- #=GS O42845/175-250 DE Uncharacterized RING finger protein C23A1.07 #=GS O42845/175-250 DR GENE3D; f7cd1bc002e59e0a3be4ed169ca1c875/175-250; #=GS O42845/175-250 DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; #=GS O42845/175-250 DR GO; GO:0005737; GO:0061630; #=GS F4HQB1/200-278 AC F4HQB1 #=GS F4HQB1/200-278 OS Arabidopsis thaliana #=GS F4HQB1/200-278 DE Peroxin-2 #=GS F4HQB1/200-278 DR GENE3D; 433fddab5480a37b1e7293c6051a916c/200-278; #=GS F4HQB1/200-278 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q75JQ3/331-422 AC Q75JQ3 #=GS Q75JQ3/331-422 OS Dictyostelium discoideum #=GS Q75JQ3/331-422 DE Peroxisome biogenesis factor 2 #=GS Q75JQ3/331-422 DR GENE3D; bf687b71501283bfb3f663f1a8ccfe65/331-422; #=GS Q75JQ3/331-422 DR ORG; Eukaryota; Dictyosteliida; Dictyostelium; Dictyostelium discoideum; #=GS Q75JQ3/331-422 DR GO; GO:0005779; GO:0007031; #=GS F0ZHQ8/336-430 AC F0ZHQ8 #=GS F0ZHQ8/336-430 OS Dictyostelium purpureum #=GS F0ZHQ8/336-430 DE Putative uncharacterized protein PEX2 #=GS F0ZHQ8/336-430 DR GENE3D; 02ac324ae7c1189e199cf89ae76a1080/336-430; #=GS F0ZHQ8/336-430 DR ORG; Eukaryota; Dictyosteliida; Dictyostelium; Dictyostelium purpureum; #=GS A0A078CQE0/253-331 AC A0A078CQE0 #=GS A0A078CQE0/253-331 OS Brassica napus #=GS A0A078CQE0/253-331 DE BnaC06g18920D protein #=GS A0A078CQE0/253-331 DR GENE3D; 0a2c9510c82f75af7ae3ff681d24336f/253-331; #=GS A0A078CQE0/253-331 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS D7KXP5/253-331 AC D7KXP5 #=GS D7KXP5/253-331 OS Arabidopsis lyrata subsp. lyrata #=GS D7KXP5/253-331 DE Putative uncharacterized protein #=GS D7KXP5/253-331 DR GENE3D; 11feda0f42487260a6c10f7af697d709/253-331; #=GS D7KXP5/253-331 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A078JUE2/147-225 AC A0A078JUE2 #=GS A0A078JUE2/147-225 OS Brassica napus #=GS A0A078JUE2/147-225 DE BnaAnng33560D protein #=GS A0A078JUE2/147-225 DR GENE3D; 80301b1b744887f47918625e278ae8e2/147-225; #=GS A0A078JUE2/147-225 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS B3NFT6/209-284 AC B3NFT6 #=GS B3NFT6/209-284 OS Drosophila erecta #=GS B3NFT6/209-284 DE Uncharacterized protein #=GS B3NFT6/209-284 DR GENE3D; 8503691718ea4336b4d3f49afe80db12/209-284; #=GS B3NFT6/209-284 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; #=GS B4PG43/213-285 AC B4PG43 #=GS B4PG43/213-285 OS Drosophila yakuba #=GS B4PG43/213-285 DE Uncharacterized protein #=GS B4PG43/213-285 DR GENE3D; a76f7af8e8af30c8bdece7775e2fb954/213-285; #=GS B4PG43/213-285 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; #=GS A0A078BUN2/251-329 AC A0A078BUN2 #=GS A0A078BUN2/251-329 OS Brassica napus #=GS A0A078BUN2/251-329 DE BnaA07g19670D protein #=GS A0A078BUN2/251-329 DR GENE3D; b4b1a33fde12466cf8449bf4fa9bd17d/251-329; #=GS A0A078BUN2/251-329 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS R0I6T8/246-323 AC R0I6T8 #=GS R0I6T8/246-323 OS Capsella rubella #=GS R0I6T8/246-323 DE Uncharacterized protein #=GS R0I6T8/246-323 DR GENE3D; b9b8176aa986aababf6529f5e01b53ec/246-323; #=GS R0I6T8/246-323 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS V4JPE9/247-325 AC V4JPE9 #=GS V4JPE9/247-325 OS Eutrema salsugineum #=GS V4JPE9/247-325 DE Uncharacterized protein #=GS V4JPE9/247-325 DR GENE3D; c3d97c3285d89f56408f8480ea730248/247-325; #=GS V4JPE9/247-325 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS M4CH50/251-329 AC M4CH50 #=GS M4CH50/251-329 OS Brassica rapa subsp. pekinensis #=GS M4CH50/251-329 DE Uncharacterized protein #=GS M4CH50/251-329 DR GENE3D; ca3c4448d6acfd757db076bf4bd9be91/251-329; #=GS M4CH50/251-329 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS D3B9X9/338-436 AC D3B9X9 #=GS D3B9X9/338-436 OS Polysphondylium pallidum #=GS D3B9X9/338-436 DE RING zinc finger-containing protein #=GS D3B9X9/338-436 DR GENE3D; e2673531862ee4fdf49d8a9b587cf867/338-436; #=GS D3B9X9/338-436 DR ORG; Eukaryota; Dictyosteliida; Polysphondylium; Polysphondylium pallidum; #=GS B4QLM7/216-285 AC B4QLM7 #=GS B4QLM7/216-285 OS Drosophila simulans #=GS B4QLM7/216-285 DE GD14082 #=GS B4QLM7/216-285 DR GENE3D; e80428c98ab08e032be0234057881ee7/216-285; #=GS B4QLM7/216-285 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; #=GS B4HJG9/216-285 AC B4HJG9 #=GS B4HJG9/216-285 OS Drosophila sechellia #=GS B4HJG9/216-285 DE GM25045 #=GS B4HJG9/216-285 DR GENE3D; e80428c98ab08e032be0234057881ee7/216-285; #=GS B4HJG9/216-285 DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; #=GS B9GXC6/262-337 AC B9GXC6 #=GS B9GXC6/262-337 OS Populus trichocarpa #=GS B9GXC6/262-337 DE Peroxisome assembly protein 2 #=GS B9GXC6/262-337 DR GENE3D; b110b752f07a046af23b93013d972de0/262-337; #=GS B9GXC6/262-337 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malpighiales; Salicaceae; Saliceae; Populus; Populus trichocarpa; #=GS G7LFV7/355-435 AC G7LFV7 #=GS G7LFV7/355-435 OS Medicago truncatula #=GS G7LFV7/355-435 DE Zinc finger, C3HC4 type (RING finger) protein #=GS G7LFV7/355-435 DR GENE3D; 76a0930288e7f2720c2568b39e87da87/355-435; #=GS G7LFV7/355-435 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago; Medicago truncatula; #=GF TC 81.6 2.3E-26 #=GF SQ 20 Q9CA86/251-329 ------------NSSAVKNILSPFAKDKSSSTKED--TVTCPICQ--------VDPA-IPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- Q9VSH8/205-280 --------------TFSGRRLEDRDGPAFLAPQMT-LSTTCTFCG--------ERPT-LPH-HMGCGHIYCYYCLNANVLTDASFCCPNCGSACPESGIQS-------------------------------------- O42845/175-250 --------------------------KEYTTSAETTVPQECGLCMMCVQRGDERVAITTPY-TTDCGHTYCYACIMSRLKLVNNVSCPICKH--RI----RFA----------LPDQTM-------------------- F4HQB1/200-278 ------------NSSAVKNILSPFAKDKSSSTKED--TVTCPICQ--------VDPA-IPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- Q75JQ3/331-422 -KTSFG-NSSGNNNNTASNPLQQLQKQQLLIQQQQMALAKCPICM--------NDPISMPY-SADCGHLFCYYCIKTSCMIDSSFTCPRCNS--LISNIKRFS----------IQ------------------------ F0ZHQ8/336-430 IKNSFGSNTSSSSASSSSSSLQQLQKQQLLIQQQQMVLSKCPICM--------NDPISIPY-TSDCGHLFCYYCIKTSCMIDSSFTCPRCNT--LISNIKRFS----------ITN----------------------- A0A078CQE0/253-331 ------------NSSAIKNILSPFAKESSSSNKED--TVACPICQ--------VDPA-TPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- D7KXP5/253-331 ------------NSSAVKNILSPFAKDKSSSTKED--TVNCPICQ--------VDPA-IPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- A0A078JUE2/147-225 ------------NSSAIKNILSPFAKESSSSNKED--TVACPICQ--------VDPA-TPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- B3NFT6/209-284 --------------AISGRRLEDRDDPAFLAPQMT-LSTTCTFCG--------ERPT-LPH-HMGCGHIYCYYCLNANVLTDASFCCPKCGSTCPESGIQS-------------------------------------- B4PG43/213-285 ------------------RRLEDRNGPAFLSPQMT-LSTTCTFCG--------DRPT-LPH-HMGCGHIYCYYCLNANVLTDASFCCPKCGSTCPESGIQSV------------------------------------- A0A078BUN2/251-329 ------------NSSAIKNILSPFAKESSSSNKED--TVACPICQ--------VDPA-TPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- R0I6T8/246-323 ------------NSSAVKNILSPFAKDRSSSTKED--TVNCPICQ--------VNPA-IPFIALPCQHRYCYYCIRTRCASAASFRCLICNE--PVIAIQREG------------------------------------ V4JPE9/247-325 ------------NSSAVKNILSPFTKDKSSSNKAD--TVTCPICQ--------VDPA-IPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- M4CH50/251-329 ------------NSSAIKNILSPFAKESSSSNKED--TVACPICQ--------VDPA-TPFIALPCQHRYCYYCIRTRCASAASFRCLRCNE--PVVAIQREGV----------------------------------- D3B9X9/338-436 --------------------------PQLLADQ---VLQKCPICM--------NDPINIPY-ISDCSHLFCYYCIKTSMMIDSSFSCPRCNS--LISNIKRFQPFSNSNSNSPISTSSSSSSSSSSSSSSTSSSSPQHS B4QLM7/216-285 ---------------------EDRDGPAFLAPQMT-LSTTCTFCG--------ERPT-LPH-HMGCGHIYCYYCLNANVLTDASFCCPKCGSACPESGIQSV------------------------------------- B4HJG9/216-285 ---------------------EDRDGPAFLAPQMT-LSTTCTFCG--------ERPT-LPH-HMGCGHIYCYYCLNANVLTDASFCCPKCGSACPESGIQSV------------------------------------- B9GXC6/262-337 ---------------------GPFSKDKSSSSKVD--DDTCPICQ--------AIPT-IPFLSLPCQHRYCYYCLRTRCAAAPSFRCPRCGE--PVVAMQRHGGLAGNTN----------------------------- G7LFV7/355-435 -----------LNSSSVKNLLRPFSKDKSSSSGED--STACPICQ--------ATPI-IPFVALPCQHRYCYYCLRTRCAAAPSFRCLRCNE--PVVAMQRHGGV---------------------------------- #=GC scorecons 0000000000001121112143332444445353401434955940000000034850596144495937997965654445588496595400644466622100000000000000000000000000000000000 #=GC scorecons_70 ________________________________________*__*___________*___*_____*_*_******_*______**_*__*________*________________________________________ #=GC scorecons_80 ________________________________________*__*___________*___*_____*_*_*****_________**_*__*_________________________________________________ #=GC scorecons_90 ________________________________________*__*___________*___*_____*_*__**_*_________*__*__*_________________________________________________ //