# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/60789
#=GF DE E3 ubiquitin-protein ligase TRAIP
#=GF AC 3.30.40.10/FF/60789
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 66.821
#=GS Q9FN35/135-219           AC Q9FN35
#=GS Q9FN35/135-219           OS Arabidopsis thaliana
#=GS Q9FN35/135-219           DE Gb|AAF27103.1
#=GS Q9FN35/135-219           DR GENE3D; ef59253ca87edadc2109d67f44d1c44e/135-219; 
#=GS Q9FN35/135-219           DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FN35/135-219           DR GO; GO:0004842; 
#=GS E7EVC4/3-52              AC E7EVC4
#=GS E7EVC4/3-52              OS Homo sapiens
#=GS E7EVC4/3-52              DE E3 ubiquitin-protein ligase TRAIP
#=GS E7EVC4/3-52              DR GENE3D; 3643d1254649c635f938d2bb24482844/3-52; 
#=GS E7EVC4/3-52              DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A0A6YWT5/4-61          AC A0A0A6YWT5
#=GS A0A0A6YWT5/4-61          OS Mus musculus
#=GS A0A0A6YWT5/4-61          DE E3 ubiquitin-protein ligase TRAIP
#=GS A0A0A6YWT5/4-61          DR GENE3D; bdcb2bc2cc925b6a026a5a035189da6d/4-61; 
#=GS A0A0A6YWT5/4-61          DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS E7EN91/3-103             AC E7EN91
#=GS E7EN91/3-103             OS Homo sapiens
#=GS E7EN91/3-103             DE E3 ubiquitin-protein ligase TRAIP
#=GS E7EN91/3-103             DR GENE3D; e3748496b73b311ce04aa6b410604e87/3-103; 
#=GS E7EN91/3-103             DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS S7MS08/4-58_121-177      AC S7MS08
#=GS S7MS08/4-58_121-177      OS Myotis brandtii
#=GS S7MS08/4-58_121-177      DE TRAF-interacting protein
#=GS S7MS08/4-58_121-177      DR GENE3D; 37324fa8432635e3b93d9d9b7de4d504/4-58_121-177; 
#=GS S7MS08/4-58_121-177      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis brandtii; 
#=GS F1NBY3/2-106             AC F1NBY3
#=GS F1NBY3/2-106             OS Gallus gallus
#=GS F1NBY3/2-106             DE Uncharacterized protein
#=GS F1NBY3/2-106             DR GENE3D; b1e3dbf1c19c7d76abaa3f62d0187ded/2-106; 
#=GS F1NBY3/2-106             DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Aves; Neognathae; Galliformes; Phasianidae; Phasianinae; Gallus; Gallus gallus; 
#=GS F7E1U4/3-99              AC F7E1U4
#=GS F7E1U4/3-99              OS Monodelphis domestica
#=GS F7E1U4/3-99              DE Uncharacterized protein
#=GS F7E1U4/3-99              DR GENE3D; c197c4308a21297f9253bab06a8b6b28/3-99; 
#=GS F7E1U4/3-99              DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS K7GK36/3-58              AC K7GK36
#=GS K7GK36/3-58              OS Pelodiscus sinensis
#=GS K7GK36/3-58              DE Uncharacterized protein
#=GS K7GK36/3-58              DR GENE3D; cc520eaee8477083aaa81abb34618306/3-58; 
#=GS K7GK36/3-58              DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Testudines; Cryptodira; Trionychidae; Pelodiscus; Pelodiscus sinensis; 
#=GS A0A1A6GZD9/4-58_109-165  AC A0A1A6GZD9
#=GS A0A1A6GZD9/4-58_109-165  OS Neotoma lepida
#=GS A0A1A6GZD9/4-58_109-165  DE Uncharacterized protein
#=GS A0A1A6GZD9/4-58_109-165  DR GENE3D; e6f77d8853c1d0ed02e648d8ca6f421d/4-58_109-165; 
#=GS A0A1A6GZD9/4-58_109-165  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Cricetidae; Neotominae; Neotoma; Neotoma lepida; 
#=GF TC 100.7 6.1E-33
#=GF SQ 9
Q9FN35/135-219                   --GALSRRIYKRKQKTSSIANKSTRYMRKRETYSSGEYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKV--RYNCPLCRFELPRE---------------------------------------------------------------------------
E7EVC4/3-52                      -IRAL----------------------------------CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQ-------------------------------------------------------------------------------
A0A0A6YWT5/4-61                  --RAL----------------------------------CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQEEENVL--DA--------------------E------------------------------------------------
E7EN91/3-103                     -IRAL----------------------------------CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQEEENVL--DA--------------------EFLKNELDNVRA------QLSQKDKEKRDSQVIIDTLRDTLEERNATVV
S7MS08/4-58_121-177              --RAL----------------------------------CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFDTAPSRTCPQCRIQVGRRSILQRAL-----DEADMLCSTLKKQMKFLEQQQDETKQAREEARRLRSKMQTMERIELLLKSQR-----------
F1NBY3/2-106                     PIRAH----------------------------------CTICSDFFDNARDVAAVPCGHTFHRACLFQWFDTAPSRTCPQCRIQVSKRHIISKLFFDVALEEQTAL------DAETLQNELDKVKA------QLSMKEKEKRECQAIVDG-------------
F7E1U4/3-99                      -IRAL----------------------------------CTICSDFFDHFRDVAAIHCGHTFHLECLIKWFDTAPSRTCPQCRIQVGKRSIINKLFFDLAPEEEAVL------DAESLKNELDKTRA------QLSLKVKEKKD--------------------
K7GK36/3-58                      -IRAH----------------------------------CTICSDFFDNQRDVAAIHCGHTFHQQCLIQWFDTAPSRTCPQCRIQVSKRHI-------------------------------------------------------------------------
A0A1A6GZD9/4-58_109-165          --RAL----------------------------------CTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGRKTI--DTL-----EERNAT-----KQMKFLEQKQDETKQAREEARQLKNKMKTMEQIELLLQSQRSEVEE----MI
#=GC scorecons                   02796000000000000000000000000000000000097996769754979976599969745976699576666799699773343130011000000110000000000002121111211110000001210201111100000000000000000000
#=GC scorecons_70                __***__________________________________******_**__******_******__******_*__**********_______________________________________________________________________________
#=GC scorecons_80                ___*___________________________________****___*___*****__***_*___**__**______***_**_*_______________________________________________________________________________
#=GC scorecons_90                ___*___________________________________*_**___*___*_**___***_*___*___**_______**_**_________________________________________________________________________________
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