# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/59760
#=GF DE E3 ubiquitin-protein ligase hrd-1
#=GF AC 3.30.40.10/FF/59760
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 47.138
#=GS Q20798/280-347      AC Q20798
#=GS Q20798/280-347      OS Caenorhabditis elegans
#=GS Q20798/280-347      DE E3 ubiquitin-protein ligase hrd-1
#=GS Q20798/280-347      DR GENE3D; 54a6217c1f46a0a4d8a0218f2070422e/280-347; 
#=GS Q20798/280-347      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS Q20798/280-347      DR GO; GO:0008593; GO:0010468; GO:0035264; 
#=GS Q20798/280-347      DR EC; 2.3.2.27; 
#=GS A8Y4B2/279-346      AC A8Y4B2
#=GS A8Y4B2/279-346      OS Caenorhabditis briggsae
#=GS A8Y4B2/279-346      DE E3 ubiquitin-protein ligase hrd-1
#=GS A8Y4B2/279-346      DR GENE3D; 4cbde84b32fb9e4e663e73f09bd6c901/279-346; 
#=GS A8Y4B2/279-346      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS A8Y4B2/279-346      DR EC; 2.3.2.27; 
#=GS G0PM08/280-355      AC G0PM08
#=GS G0PM08/280-355      OS Caenorhabditis brenneri
#=GS G0PM08/280-355      DE Putative uncharacterized protein
#=GS G0PM08/280-355      DR GENE3D; 169da1bfd9e2be7efb3f788b6b388b59/280-355; 
#=GS G0PM08/280-355      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS E3LPR1/283-358      AC E3LPR1
#=GS E3LPR1/283-358      OS Caenorhabditis remanei
#=GS E3LPR1/283-358      DE CRE-SEL-11 protein
#=GS E3LPR1/283-358      DR GENE3D; 26958fc93e801b7f457bf0467214ae55/283-358; 
#=GS E3LPR1/283-358      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GS A0A0B1T831/175-243  AC A0A0B1T831
#=GS A0A0B1T831/175-243  OS Oesophagostomum dentatum
#=GS A0A0B1T831/175-243  DE Zinc finger, C3HC4 type
#=GS A0A0B1T831/175-243  DR GENE3D; 8a3cf6b0a9edce0f99e1681a2744b35e/175-243; 
#=GS A0A0B1T831/175-243  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Strongyloidea; Cloacinidae; Oesophagostomum; Oesophagostomum dentatum; 
#=GS K7I4E0/124-197      AC K7I4E0
#=GS K7I4E0/124-197      OS Caenorhabditis japonica
#=GS K7I4E0/124-197      DE Uncharacterized protein
#=GS K7I4E0/124-197      DR GENE3D; a3ac0164e7b069a7248c757dab2c60a7/124-197; 
#=GS K7I4E0/124-197      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GS A0A1I7T5E8/266-342  AC A0A1I7T5E8
#=GS A0A1I7T5E8/266-342  OS Caenorhabditis tropicalis
#=GS A0A1I7T5E8/266-342  DE Uncharacterized protein
#=GS A0A1I7T5E8/266-342  DR GENE3D; ab53237e3954329b69b79c9b522d827b/266-342; 
#=GS A0A1I7T5E8/266-342  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis tropicalis; 
#=GS G0NH11/280-355      AC G0NH11
#=GS G0NH11/280-355      OS Caenorhabditis brenneri
#=GS G0NH11/280-355      DE CBN-SEL-11 protein
#=GS G0NH11/280-355      DR GENE3D; b907a8756fc0ea40f83b55b2ece50ced/280-355; 
#=GS G0NH11/280-355      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A0A1I7XIK6/507-572  AC A0A1I7XIK6
#=GS A0A1I7XIK6/507-572  OS Heterorhabditis bacteriophora
#=GS A0A1I7XIK6/507-572  DE Uncharacterized protein
#=GS A0A1I7XIK6/507-572  DR GENE3D; cf155ecbb2c41a99c9b87d92ed1f5b83/507-572; 
#=GS A0A1I7XIK6/507-572  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Heterorhabditidae; Heterorhabditis; Heterorhabditis bacteriophora; 
#=GS K7I4D9/124-199      AC K7I4D9
#=GS K7I4D9/124-199      OS Caenorhabditis japonica
#=GS K7I4D9/124-199      DE Uncharacterized protein
#=GS K7I4D9/124-199      DR GENE3D; f70f17b120312e52bf5f01c2fcf9578f/124-199; 
#=GS K7I4D9/124-199      DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis japonica; 
#=GF TC 154.0 2.6E-49
#=GF SQ 10
Q20798/280-347              ---------------VSAEDLAAMDATCIICREEMTVDASPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWQGRNGA--AAGG
A8Y4B2/279-346              --------------VVSNDELSAMDATCIICREEMTVESSPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWQGRNGA--AGG-
G0PM08/280-355              -SRRAINAMNSQFPVVSADELATMDATCIICREEMTGEASPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWQVRN--------
E3LPR1/283-358              -SRRAINAMNSQFPVVSSDELAAMDATCIICREEMTVEAAPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWQGRN--------
A0A0B1T831/175-243          ---------------VSAEDLSAMDATCIICRDEMTPESAPKRLPCGHVFHTHCLRSWFQRQQTCPTCRTDILAAAGQRPAANG-
K7I4E0/124-197              LSRRAINAMNSQFSNVTAEELTAMDATCIICREEMTAESSPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWH-----------
A0A1I7T5E8/266-342          -SRRAINAMNSQFPIVTSDELAAMDATCIICREEMTGDAAPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWQVRNG-------
G0NH11/280-355              -SRRAINAMNSQFPVVSADELATMDATCIICREEMTGEASPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWQVRN--------
A0A1I7XIK6/507-572          --------------IVTSEELSSMDATCIICREEMTAESSPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDILAVPGNR--A---
K7I4D9/124-199              LSRRAINAMNSQFSNVTAEELTAMDATCIICREEMTAESSPKRLPCSHVFHAHCLRSWFQRQQTCPTCRTDIWRKF---------
#=GC scorecons              0222222222222129657795699999999989994766999999799997999999999999999999995433310001000
#=GC scorecons_70           _______________*__***_**************_*_*********************************_____________
#=GC scorecons_80           _______________*___**__*************_*__********************************_____________
#=GC scorecons_90           _______________*____*__*********_***____******_****_********************_____________
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