# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/59463
#=GF DE Helicase-like transcription factor
#=GF AC 3.30.40.10/FF/59463
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 59.540
#=GS Q14527/728-819      AC Q14527
#=GS Q14527/728-819      OS Homo sapiens
#=GS Q14527/728-819      DE Helicase-like transcription factor
#=GS Q14527/728-819      DR GENE3D; c04dc710f3663ea29cce8b1873a0bf69/728-819; 
#=GS Q14527/728-819      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q14527/728-819      DR GO; GO:0003677; GO:0003723; GO:0005515; GO:0005634; GO:0005654; GO:0006355; GO:0016020; GO:0016567; GO:0031625; GO:0061630; 
#=GS Q14527/728-819      DR EC; 2.3.2.27; 
#=GS A0A0C4DGA6/727-818  AC A0A0C4DGA6
#=GS A0A0C4DGA6/727-818  OS Homo sapiens
#=GS A0A0C4DGA6/727-818  DE Helicase-like transcription factor
#=GS A0A0C4DGA6/727-818  DR GENE3D; bb38f8ec15d561e27c4de179a87de6de/727-818; 
#=GS A0A0C4DGA6/727-818  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS A0A0C4DGA6/727-818  DR GO; GO:0005634; GO:0005654; 
#=GS G1QQV6/729-819      AC G1QQV6
#=GS G1QQV6/729-819      OS Nomascus leucogenys
#=GS G1QQV6/729-819      DE Uncharacterized protein
#=GS G1QQV6/729-819      DR GENE3D; 14648ef07a8d7546907142315ae5c2da/729-819; 
#=GS G1QQV6/729-819      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS S7MP29/1406-1495    AC S7MP29
#=GS S7MP29/1406-1495    OS Myotis brandtii
#=GS S7MP29/1406-1495    DE Helicase-like transcription factor
#=GS S7MP29/1406-1495    DR GENE3D; 3bca48a6f627ad73177319a8f31a6f6a/1406-1495; 
#=GS S7MP29/1406-1495    DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis brandtii; 
#=GS H2PBP9/782-873      AC H2PBP9
#=GS H2PBP9/782-873      OS Pongo abelii
#=GS H2PBP9/782-873      DE Uncharacterized protein
#=GS H2PBP9/782-873      DR GENE3D; 623be64eaf8ead9a756946622b945d7c/782-873; 
#=GS H2PBP9/782-873      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS G1PP88/742-835      AC G1PP88
#=GS G1PP88/742-835      OS Myotis lucifugus
#=GS G1PP88/742-835      DE Uncharacterized protein
#=GS G1PP88/742-835      DR GENE3D; 6df1fd33ca0812d23adbebf420831d7e/742-835; 
#=GS G1PP88/742-835      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis; Myotis lucifugus; 
#=GS L9KVE0/653-736      AC L9KVE0
#=GS L9KVE0/653-736      OS Tupaia chinensis
#=GS L9KVE0/653-736      DE Helicase-like transcription factor
#=GS L9KVE0/653-736      DR GENE3D; 8b675af32a476a8f85d09e82d854b608/653-736; 
#=GS L9KVE0/653-736      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Scandentia; Tupaiidae; Tupaia; Tupaia chinensis; 
#=GS S9Y4X6/337-411      AC S9Y4X6
#=GS S9Y4X6/337-411      OS Camelus ferus
#=GS S9Y4X6/337-411      DE Helicase-like transcription factor
#=GS S9Y4X6/337-411      DR GENE3D; a7cb067e70e05677808cbfea117669b8/337-411; 
#=GS S9Y4X6/337-411      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Tylopoda; Camelidae; Camelus; Camelus ferus; 
#=GS H2R3U6/728-819      AC H2R3U6
#=GS H2R3U6/728-819      OS Pan troglodytes
#=GS H2R3U6/728-819      DE Helicase-like transcription factor
#=GS H2R3U6/728-819      DR GENE3D; aed1a9f437d9de98fd7ee52d22889d1d/728-819; 
#=GS H2R3U6/728-819      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS G3QFZ9/733-824      AC G3QFZ9
#=GS G3QFZ9/733-824      OS Gorilla gorilla gorilla
#=GS G3QFZ9/733-824      DE Uncharacterized protein
#=GS G3QFZ9/733-824      DR GENE3D; f5cccc5462695a89280bc38b616e47aa/733-824; 
#=GS G3QFZ9/733-824      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS F6TIA5/765-814      AC F6TIA5
#=GS F6TIA5/765-814      OS Monodelphis domestica
#=GS F6TIA5/765-814      DE Uncharacterized protein
#=GS F6TIA5/765-814      DR GENE3D; 91e91ebde1b2d106b113443dd3b72f43/765-814; 
#=GS F6TIA5/765-814      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Didelphimorphia; Didelphidae; Didelphinae; Monodelphis; Monodelphis domestica; 
#=GS G3SYB9/740-813      AC G3SYB9
#=GS G3SYB9/740-813      OS Loxodonta africana
#=GS G3SYB9/740-813      DE Uncharacterized protein
#=GS G3SYB9/740-813      DR GENE3D; eb9b0dff5a20256e46a7e1bba61ef3e3/740-813; 
#=GS G3SYB9/740-813      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Afrotheria; Proboscidea; Elephantidae; Loxodonta; Loxodonta africana; 
#=GS G5BSK6/732-777      AC G5BSK6
#=GS G5BSK6/732-777      OS Heterocephalus glaber
#=GS G5BSK6/732-777      DE Helicase-like transcription factor
#=GS G5BSK6/732-777      DR GENE3D; 391ef1208fa005929e52e237d17133ab/732-777; 
#=GS G5BSK6/732-777      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Hystricomorpha; Bathyergidae; Heterocephalus; Heterocephalus glaber; 
#=GS G1SJW3/761-805      AC G1SJW3
#=GS G1SJW3/761-805      OS Oryctolagus cuniculus
#=GS G1SJW3/761-805      DE Helicase-like transcription factor
#=GS G1SJW3/761-805      DR GENE3D; e400b24f405e155486f999c49746d1ee/761-805; 
#=GS G1SJW3/761-805      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Lagomorpha; Leporidae; Oryctolagus; Oryctolagus cuniculus; 
#=GS D3ZMQ9/723-772      AC D3ZMQ9
#=GS D3ZMQ9/723-772      OS Rattus norvegicus
#=GS D3ZMQ9/723-772      DE Helicase-like transcription factor
#=GS D3ZMQ9/723-772      DR GENE3D; 0449a51de6e8092f2d921cb64e34bb48/723-772; 
#=GS D3ZMQ9/723-772      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS F1MLM2/764-809      AC F1MLM2
#=GS F1MLM2/764-809      OS Bos taurus
#=GS F1MLM2/764-809      DE Uncharacterized protein
#=GS F1MLM2/764-809      DR GENE3D; ec9cb66269e4b57f35e31c6e01aea7da/764-809; 
#=GS F1MLM2/764-809      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS E2R9I5/762-807      AC E2R9I5
#=GS E2R9I5/762-807      OS Canis lupus familiaris
#=GS E2R9I5/762-807      DE Uncharacterized protein
#=GS E2R9I5/762-807      DR GENE3D; 778e349f3a1ae2a07b9cc0a4578d256a/762-807; 
#=GS E2R9I5/762-807      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS H0UVS1/371-418      AC H0UVS1
#=GS H0UVS1/371-418      OS Cavia porcellus
#=GS H0UVS1/371-418      DE Uncharacterized protein
#=GS H0UVS1/371-418      DR GENE3D; 3f4f820844a97513287c4e04f8357d70/371-418; 
#=GS H0UVS1/371-418      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Hystricomorpha; Caviidae; Cavia; Cavia porcellus; 
#=GS W5P578/767-812      AC W5P578
#=GS W5P578/767-812      OS Ovis aries
#=GS W5P578/767-812      DE Uncharacterized protein
#=GS W5P578/767-812      DR GENE3D; bab8b04948a5f8831124d664f4e874c7/767-812; 
#=GS W5P578/767-812      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GF TC 104.3 3.6E-33
#=GF SQ 19
Q14527/728-819              SNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELA---------------R
A0A0C4DGA6/727-818          SNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELA---------------R
G1QQV6/729-819              -SGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELA---------------H
S7MP29/1406-1495            ----------------LIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELTCGTEKKSNMEWTSSS-
H2PBP9/782-873              SNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELA---------------R
G1PP88/742-835              -------------QKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELTCDTEKKSNMEWTSSSK
L9KVE0/653-736              ----SGNDTPEELQKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQSEQPHAKCPLCRKDINEDNLLECPPE-------------------
S9Y4X6/337-411              ---------PEELRKTLIRKMKLILSSGSDEECAICLDSLTVPVITYCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNLLE-----------------------
H2R3U6/728-819              SNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELA---------------R
G3QFZ9/733-824              SNGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLLECPPEELA---------------R
F6TIA5/765-814              --------------------------------CAICLDSLHIPVITHCAHVFCKPCICQVIRSEQPNAKCPLCRNDLRAENL-------------------------
G3SYB9/740-813              -----------ELRKKLIRKMKLVLSSGSDEECAICLDSLAAPVITHCAHVFCKPCICQVIQNEQPNAKCPLCRNNIDGNNLLEC----------------------
G5BSK6/732-777              -----------------------------------CLDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDN--------------------------
G1SJW3/761-805              ------------------------------------LDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDN--------------------------
D3ZMQ9/723-772              ------------------------------EECSICLDSLTFPVITHCAHVFCKPCICQVIQREQPHAKCPLCRSNIHGH---------------------------
F1MLM2/764-809              ------------------------------------LDSLMAPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDSL-------------------------
E2R9I5/762-807              ------------------------------------LDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDNL-------------------------
H0UVS1/371-418              -------------------------------ECAVCLDSLTFPVITHCAHVFCKPCICQVIQNEQPHPKCPLCRNDIHG----------------------------
W5P578/767-812              ------------------------------------LDSLMAPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHGDSL-------------------------
#=GC scorecons              00000000011111212222222222222233444599996599998999999999999998799978999999788766552221111100000000000000000
#=GC scorecons_70           ____________________________________*****_************************************_*___________________________
#=GC scorecons_80           ____________________________________****__************************************_____________________________
#=GC scorecons_90           ____________________________________****__********************_***_*******__*______________________________
//