# STOCKHOLM 1.0
#=GF ID 3.30.40.10/FF/39898
#=GF DE Enhancer of bithorax, isoform H
#=GF AC 3.30.40.10/FF/39898
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 12.532
#=GS Q9W0T1/2493-2549      AC Q9W0T1
#=GS Q9W0T1/2493-2549      OS Drosophila melanogaster
#=GS Q9W0T1/2493-2549      DE Nucleosome-remodeling factor subunit NURF301
#=GS Q9W0T1/2493-2549      DR GENE3D; 9327fd34ad2fbe20b7a8313e1532ba56/2493-2549; 
#=GS Q9W0T1/2493-2549      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9W0T1/2493-2549      DR GO; GO:0006325; GO:0006338; GO:0006351; GO:0006357; GO:0007095; GO:0010468; GO:0016589; GO:0016922; GO:0030097; GO:0035064; GO:0035073; GO:0035076; GO:0042766; GO:0045747; GO:0045824; GO:0046331; GO:0046426; GO:0048515; GO:0048813; GO:0070577; 
#=GS M9PDH1/2585-2641      AC M9PDH1
#=GS M9PDH1/2585-2641      OS Drosophila melanogaster
#=GS M9PDH1/2585-2641      DE Enhancer of bithorax, isoform H
#=GS M9PDH1/2585-2641      DR GENE3D; 43a4db500c0b5d44549fb1c95398ace6/2585-2641; 
#=GS M9PDH1/2585-2641      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS M9PE12/2492-2548      AC M9PE12
#=GS M9PE12/2492-2548      OS Drosophila melanogaster
#=GS M9PE12/2492-2548      DE Enhancer of bithorax, isoform I
#=GS M9PE12/2492-2548      DR GENE3D; 45ee3ac1c367cb2ed18d89904aabda92/2492-2548; 
#=GS M9PE12/2492-2548      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS E1JHV6/2493-2549      AC E1JHV6
#=GS E1JHV6/2493-2549      OS Drosophila melanogaster
#=GS E1JHV6/2493-2549      DE Enhancer of bithorax, isoform E
#=GS E1JHV6/2493-2549      DR GENE3D; 9327fd34ad2fbe20b7a8313e1532ba56/2493-2549; 
#=GS E1JHV6/2493-2549      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS B4MN95/2578-2635      AC B4MN95
#=GS B4MN95/2578-2635      OS Drosophila willistoni
#=GS B4MN95/2578-2635      DE Uncharacterized protein
#=GS B4MN95/2578-2635      DR GENE3D; 311f4268d89d2c8937c761cb62017985/2578-2635; 
#=GS B4MN95/2578-2635      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B4QKV1/1363-1420      AC B4QKV1
#=GS B4QKV1/1363-1420      OS Drosophila simulans
#=GS B4QKV1/1363-1420      DE GD13529
#=GS B4QKV1/1363-1420      DR GENE3D; 39e7812f4895f06445d444fa376138f5/1363-1420; 
#=GS B4QKV1/1363-1420      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GS A0A0R1DUC0/2584-2640  AC A0A0R1DUC0
#=GS A0A0R1DUC0/2584-2640  OS Drosophila yakuba
#=GS A0A0R1DUC0/2584-2640  DE Uncharacterized protein, isoform C
#=GS A0A0R1DUC0/2584-2640  DR GENE3D; 3d196cc9ae4d862a8c2d46d0a0f82e34/2584-2640; 
#=GS A0A0R1DUC0/2584-2640  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4KXX6/2771-2829      AC B4KXX6
#=GS B4KXX6/2771-2829      OS Drosophila mojavensis
#=GS B4KXX6/2771-2829      DE Uncharacterized protein
#=GS B4KXX6/2771-2829      DR GENE3D; 5f8ae9e4d11a6147d5d3313796f9023d/2771-2829; 
#=GS B4KXX6/2771-2829      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS A0A0P8XT27/2666-2723  AC A0A0P8XT27
#=GS A0A0P8XT27/2666-2723  OS Drosophila ananassae
#=GS A0A0P8XT27/2666-2723  DE Uncharacterized protein, isoform D
#=GS A0A0P8XT27/2666-2723  DR GENE3D; 673fdd6da7b64597b055abf0e5bfaa83/2666-2723; 
#=GS A0A0P8XT27/2666-2723  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B3M8I2/2539-2596      AC B3M8I2
#=GS B3M8I2/2539-2596      OS Drosophila ananassae
#=GS B3M8I2/2539-2596      DE Uncharacterized protein, isoform J
#=GS B3M8I2/2539-2596      DR GENE3D; 750f2c65edc84f833b63d361a26ab332/2539-2596; 
#=GS B3M8I2/2539-2596      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A0P8ZT82/2664-2721  AC A0A0P8ZT82
#=GS A0A0P8ZT82/2664-2721  OS Drosophila ananassae
#=GS A0A0P8ZT82/2664-2721  DE Uncharacterized protein, isoform H
#=GS A0A0P8ZT82/2664-2721  DR GENE3D; 9df5837e5d5eb00de526c5c696a70529/2664-2721; 
#=GS A0A0P8ZT82/2664-2721  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A0Q5U207/221-277    AC A0A0Q5U207
#=GS A0A0Q5U207/221-277    OS Drosophila erecta
#=GS A0A0Q5U207/221-277    DE Uncharacterized protein
#=GS A0A0Q5U207/221-277    DR GENE3D; b5c14fbed3cbc8afedac5e13b1f25df6/221-277; 
#=GS A0A0Q5U207/221-277    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4PC37/2495-2551      AC B4PC37
#=GS B4PC37/2495-2551      OS Drosophila yakuba
#=GS B4PC37/2495-2551      DE Uncharacterized protein, isoform E
#=GS B4PC37/2495-2551      DR GENE3D; bacf9273e88c3e04d964cbb7251b4bb7/2495-2551; 
#=GS B4PC37/2495-2551      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS A0A0P9AIR3/2645-2702  AC A0A0P9AIR3
#=GS A0A0P9AIR3/2645-2702  OS Drosophila ananassae
#=GS A0A0P9AIR3/2645-2702  DE Uncharacterized protein, isoform B
#=GS A0A0P9AIR3/2645-2702  DR GENE3D; c4377c3e00b02ad76149a61ff2e999b8/2645-2702; 
#=GS A0A0P9AIR3/2645-2702  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GF TC 145.8 1.7E-46
#=GF SQ 14
Q9W0T1/2493-2549              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA-
M9PDH1/2585-2641              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA-
M9PE12/2492-2548              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA-
E1JHV6/2493-2549              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA-
B4MN95/2578-2635              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRNTDAN
B4QKV1/1363-1420              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDAN
A0A0R1DUC0/2584-2640          -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA-
B4KXX6/2771-2829              ETQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGIVQSEAEYIDEYVCPECQRNSDAN
A0A0P8XT27/2666-2723          -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKTDAN
B3M8I2/2539-2596              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKTDAN
A0A0P8ZT82/2664-2721          -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKTDAN
A0A0Q5U207/221-277            -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA-
B4PC37/2495-2551              -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKNDA-
A0A0P9AIR3/2645-2702          -TQQLYCSCRQPYDESQFYICCDKCQDWFHGRCVGILQSEAEFIDEYVCPECQRKTDAN
#=GC scorecons                09999999999999999999999999999999999979999979999999999965992
#=GC scorecons_70             _******************************************************_**_
#=GC scorecons_80             _*****************************************************__**_
#=GC scorecons_90             _***********************************_*****_***********__**_
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