# STOCKHOLM 1.0 #=GF ID 3.30.160.20/FF/5679 #=GF DE Double-stranded RNA-binding protein 1 #=GF AC 3.30.160.20/FF/5679 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 48.879 #=GS 2l2nA00/19-103 AC O04492 #=GS 2l2nA00/19-103 OS Arabidopsis thaliana #=GS 2l2nA00/19-103 DE Double-stranded RNA-binding protein 1 #=GS 2l2nA00/19-103 DR CATH; 2l2n; A:16-86; #=GS 2l2nA00/19-103 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS 2l2nA00/19-103 DR GO; GO:0003725; GO:0005515; GO:0005634; GO:0009733; GO:0009735; GO:0009737; GO:0010267; GO:0010305; GO:0010445; GO:0010589; GO:0031054; GO:0035196; GO:0035198; GO:0035279; #=GS 3adgA00/1-73 AC O04492 #=GS 3adgA00/1-73 OS Arabidopsis thaliana #=GS 3adgA00/1-73 DE Double-stranded RNA-binding protein 1 #=GS 3adgA00/1-73 DR CATH; 3adg; A:13-84; #=GS 3adgA00/1-73 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS 3adgA00/1-73 DR GO; GO:0003725; GO:0005515; GO:0005634; GO:0009733; GO:0009735; GO:0009737; GO:0010267; GO:0010305; GO:0010445; GO:0010589; GO:0031054; GO:0035196; GO:0035198; GO:0035279; #=GS 3adiA00/1-73 AC O04492 #=GS 3adiA00/1-73 OS Arabidopsis thaliana #=GS 3adiA00/1-73 DE Double-stranded RNA-binding protein 1 #=GS 3adiA00/1-73 DR CATH; 3adi; A:14-84; #=GS 3adiA00/1-73 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS 3adiA00/1-73 DR GO; GO:0003725; GO:0005515; GO:0005634; GO:0009733; GO:0009735; GO:0009737; GO:0010267; GO:0010305; GO:0010445; GO:0010589; GO:0031054; GO:0035196; GO:0035198; GO:0035279; #=GS 3adiB00/1-73 AC O04492 #=GS 3adiB00/1-73 OS Arabidopsis thaliana #=GS 3adiB00/1-73 DE Double-stranded RNA-binding protein 1 #=GS 3adiB00/1-73 DR CATH; 3adi; B:14-84; #=GS 3adiB00/1-73 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS 3adiB00/1-73 DR GO; GO:0003725; GO:0005515; GO:0005634; GO:0009733; GO:0009735; GO:0009737; GO:0010267; GO:0010305; GO:0010445; GO:0010589; GO:0031054; GO:0035196; GO:0035198; GO:0035279; #=GS 3adiC00/1-73 AC O04492 #=GS 3adiC00/1-73 OS Arabidopsis thaliana #=GS 3adiC00/1-73 DE Double-stranded RNA-binding protein 1 #=GS 3adiC00/1-73 DR CATH; 3adi; C:14-84; #=GS 3adiC00/1-73 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS 3adiC00/1-73 DR GO; GO:0003725; GO:0005515; GO:0005634; GO:0009733; GO:0009735; GO:0009737; GO:0010267; GO:0010305; GO:0010445; GO:0010589; GO:0031054; GO:0035196; GO:0035198; GO:0035279; #=GS O04492/16-97 AC O04492 #=GS O04492/16-97 OS Arabidopsis thaliana #=GS O04492/16-97 DE Double-stranded RNA-binding protein 1 #=GS O04492/16-97 DR GENE3D; e732504bd82d46252a2696617fec0b41/16-97; #=GS O04492/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS O04492/16-97 DR GO; GO:0003725; GO:0005515; GO:0005634; GO:0009733; GO:0009735; GO:0009737; GO:0010267; GO:0010305; GO:0010445; GO:0010589; GO:0031054; GO:0035196; GO:0035198; GO:0035279; #=GS A0A1J3E0A8/73-154 AC A0A1J3E0A8 #=GS A0A1J3E0A8/73-154 OS Noccaea caerulescens #=GS A0A1J3E0A8/73-154 DE Double-stranded RNA-binding protein 1 #=GS A0A1J3E0A8/73-154 DR GENE3D; 0610053103a523eeea4ad6fc1a97d956/73-154; #=GS A0A1J3E0A8/73-154 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS A0A078G7S5/16-97 AC A0A078G7S5 #=GS A0A078G7S5/16-97 OS Brassica napus #=GS A0A078G7S5/16-97 DE BnaC08g13800D protein #=GS A0A078G7S5/16-97 DR GENE3D; 2f86a46193ffe90fb8c02eb27818a2d9/16-97; #=GS A0A078G7S5/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS R0IM49/21-102 AC R0IM49 #=GS R0IM49/21-102 OS Capsella rubella #=GS R0IM49/21-102 DE Uncharacterized protein #=GS R0IM49/21-102 DR GENE3D; 3262479ad648307cb6d52ba8efe3c668/21-102; #=GS R0IM49/21-102 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A0D3C8U3/16-97 AC A0A0D3C8U3 #=GS A0A0D3C8U3/16-97 OS Brassica oleracea var. oleracea #=GS A0A0D3C8U3/16-97 DE Uncharacterized protein #=GS A0A0D3C8U3/16-97 DR GENE3D; 39c053174f1fc49945e8dd06d0497ebe/16-97; #=GS A0A0D3C8U3/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS V4KDT6/7-88 AC V4KDT6 #=GS V4KDT6/7-88 OS Eutrema salsugineum #=GS V4KDT6/7-88 DE Uncharacterized protein #=GS V4KDT6/7-88 DR GENE3D; 574585cff65420d123641d81aacb9263/7-88; #=GS V4KDT6/7-88 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS M4DU06/16-97 AC M4DU06 #=GS M4DU06/16-97 OS Brassica rapa subsp. pekinensis #=GS M4DU06/16-97 DE Uncharacterized protein #=GS M4DU06/16-97 DR GENE3D; 8c6509aa75d42ea11f2bb0ad6b3b781a/16-97; #=GS M4DU06/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS Q5IZK6/16-97 AC Q5IZK6 #=GS Q5IZK6/16-97 OS Brassica napus #=GS Q5IZK6/16-97 DE DsRNA-binding protein LH-c #=GS Q5IZK6/16-97 DR GENE3D; 8c6509aa75d42ea11f2bb0ad6b3b781a/16-97; #=GS Q5IZK6/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS Q9LEQ0/16-97 AC Q9LEQ0 #=GS Q9LEQ0/16-97 OS Brassica rapa #=GS Q9LEQ0/16-97 DE BcpLH protein #=GS Q9LEQ0/16-97 DR GENE3D; 8c6509aa75d42ea11f2bb0ad6b3b781a/16-97; #=GS Q9LEQ0/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; #=GS D7KJT2/16-97 AC D7KJT2 #=GS D7KJT2/16-97 OS Arabidopsis lyrata subsp. lyrata #=GS D7KJT2/16-97 DE Putative uncharacterized protein #=GS D7KJT2/16-97 DR GENE3D; 8e3506843381d95a5fdecdb2c4476f13/16-97; #=GS D7KJT2/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS R0I745/77-158 AC R0I745 #=GS R0I745/77-158 OS Capsella rubella #=GS R0I745/77-158 DE Uncharacterized protein #=GS R0I745/77-158 DR GENE3D; 927b086c7409f2751773757e172e6535/77-158; #=GS R0I745/77-158 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A078E1Q3/16-97 AC A0A078E1Q3 #=GS A0A078E1Q3/16-97 OS Brassica napus #=GS A0A078E1Q3/16-97 DE BnaA06g05600D protein #=GS A0A078E1Q3/16-97 DR GENE3D; acb6a0e13441400d71e818fed5ce70c1/16-97; #=GS A0A078E1Q3/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4EPS2/16-97 AC M4EPS2 #=GS M4EPS2/16-97 OS Brassica rapa subsp. pekinensis #=GS M4EPS2/16-97 DE Uncharacterized protein #=GS M4EPS2/16-97 DR GENE3D; c840701957d20b86beed23b3a60d68a2/16-97; #=GS M4EPS2/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A078E1F3/21-102 AC A0A078E1F3 #=GS A0A078E1F3/21-102 OS Brassica napus #=GS A0A078E1F3/21-102 DE BnaC05g07140D protein #=GS A0A078E1F3/21-102 DR GENE3D; d399bb9bec8358b786dfa272a9b38f2c/21-102; #=GS A0A078E1F3/21-102 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078GX96/52-133 AC A0A078GX96 #=GS A0A078GX96/52-133 OS Brassica napus #=GS A0A078GX96/52-133 DE BnaA08g26200D protein #=GS A0A078GX96/52-133 DR GENE3D; e4e32846af244bb80296241b93a2840a/52-133; #=GS A0A078GX96/52-133 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A0D3DNR2/16-97 AC A0A0D3DNR2 #=GS A0A0D3DNR2/16-97 OS Brassica oleracea var. oleracea #=GS A0A0D3DNR2/16-97 DE Uncharacterized protein #=GS A0A0D3DNR2/16-97 DR GENE3D; eea1de2c4fdbcae0bca815b1638a7176/16-97; #=GS A0A0D3DNR2/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A087HMB7/16-97 AC A0A087HMB7 #=GS A0A087HMB7/16-97 OS Arabis alpina #=GS A0A087HMB7/16-97 DE Uncharacterized protein #=GS A0A087HMB7/16-97 DR GENE3D; f35feeecf236c79baac5395f959a287c/16-97; #=GS A0A087HMB7/16-97 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GF TC 175.6 1.1E-55 #=GF SQ 22 2l2nA00/19-103 ----FKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETG 3adgA00/1-73 GSHVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAK---------------- 3adiA00/1-73 GSHVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAK---------------- 3adiB00/1-73 GSHVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAK---------------- 3adiC00/1-73 GSHVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAK---------------- O04492/16-97 ----FKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVH--- A0A1J3E0A8/73-154 ----FKSRLQEFAQKYKLQTPVYETVKEGPSHKSFFQSTVIVDGVRYESLPGFFNRKAAEQSAAEVALQELAKSSELTQCVSPPVH--- A0A078G7S5/16-97 ----FKSRLQEYAQKYKLPTPIYETVKEGPSHKSLFQSTVIVDGVRYDSLPGFFNRKAAEQSAAEVALQELSKSTELGQCVSLPVH--- R0IM49/21-102 ----FKSRLQEYAQKYKLPTPIYETVKEGPSHKAFFHSTVILDGVRYNSLPWFLNRKAAEQSAAEVALQELAKSSDPSQCVSQPVH--- A0A0D3C8U3/16-97 ----FKSRLQEYAQRYKLPTPLYETIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALQELAKSSDLTQCVSLPVH--- V4KDT6/7-88 ----FKSRLQEYAQKYKLPTPVYETVKEGPSHRSLFQSTVIVNGVRYDSLPGFFNRKAAEQSAAEVALQELAKSSEQSQCVSLPVH--- M4DU06/16-97 ----FKSRLQEYAQRYKLPTPLYETIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALQELAKSSDLTQSVSLPVH--- Q5IZK6/16-97 ----FKSRLQEYAQRYKLPTPLYETIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALQELAKSSDLTQSVSLPVH--- Q9LEQ0/16-97 ----FKSRLQEYAQRYKLPTPLYETIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALQELAKSSDLTQSVSLPVH--- D7KJT2/16-97 ----FKSRLQEYAQKYKLQTPVYETVKEGPSHKSFFQSTVILNGVRYNSLPGFFNRKAAEQSAAEVALQELAKSSELSQCVSQPVH--- R0I745/77-158 ----FKSRLQEYAQKYKLPTPIYETVKEGPSHKAFFHSTVILDGVRYNSLPWFLNRKAAEQSAAEVALQELAKSSDPSQCVSQPVH--- A0A078E1Q3/16-97 ----FKSRLQEYAQRYKLPTPLYETIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALQELAKSSDLTQSVSLPVH--- M4EPS2/16-97 ----FKSRLQEYAQKYKLPTPIYETVKEGPSHKSLFQSTVIVDGVRYDSLPGFFNRKAAEQSAAEVALQELSKSTELGQCVSLPVH--- A0A078E1F3/21-102 ----FKSRLQEYAQRYKLPTPLYEAIKEGPSHKPLFQSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALQELAKSSDLTQSVSLPVH--- A0A078GX96/52-133 ----FKSRLQEYAQKYKLPTPIYETVKEGPSHKSLFQSTVIVDGVRYDSLPGFFNRKAAEQSAAEVALRELSKSTELGQCVSLPVH--- A0A0D3DNR2/16-97 ----FKSRLQEYAQKYKLPTPIYETVKEGPSHKSLFQSTVIVDGVRYDSLPGFFNRKAAEQSAAEVALQELSKSTELGQCVSLPVH--- A0A087HMB7/16-97 ----FKSRLQEYAQKLKLPTPVYETIKEGPPHKSFFHSTVILDGVRYDSLPGFFNRKAAEQSAAEVALQELAKSSDQGKCAAQPIH--- #=GC scorecons 00009999999899789989969967999989867979999667999699979899999999999999699794332243332444000 #=GC scorecons_70 ____*****************_**_************************************************________________ #=GC scorecons_80 ____*****************_**_********_*******___***_********************_****________________ #=GC scorecons_90 ____**********_******_**__*******__*_****___***_***_****************_**_*________________ //