# STOCKHOLM 1.0
#=GF ID 3.30.1490.70/FF/7223
#=GF DE RNA-editing ligase 1, mitochondrial
#=GF AC 3.30.1490.70/FF/7223
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 78.545
#=GS P86924/25-59_208-271        AC P86924
#=GS P86924/25-59_208-271        OS Trypanosoma brucei brucei
#=GS P86924/25-59_208-271        DE RNA-editing ligase 2, mitochondrial
#=GS P86924/25-59_208-271        DR GENE3D; 410bc17c5ce7dcecb994c835f1f4ded7/25-59_208-271; 
#=GS P86924/25-59_208-271        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS P86924/25-59_208-271        DR GO; GO:0003972; GO:0005739; GO:0016556; GO:0031019; GO:0045293; 
#=GS P86924/25-59_208-271        DR EC; 6.5.1.3; 
#=GS P86925/25-59_208-271        AC P86925
#=GS P86925/25-59_208-271        OS Trypanosoma brucei brucei TREU927
#=GS P86925/25-59_208-271        DE RNA-editing ligase 2, mitochondrial
#=GS P86925/25-59_208-271        DR GENE3D; e9b875f0198f5d2fe7a2ed5d196775b4/25-59_208-271; 
#=GS P86925/25-59_208-271        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei brucei; 
#=GS P86925/25-59_208-271        DR GO; GO:0003972; GO:0005739; GO:0016556; GO:0031019; GO:0045293; 
#=GS P86925/25-59_208-271        DR EC; 6.5.1.3; 
#=GS C9ZIM1/25-59_208-271        AC C9ZIM1
#=GS C9ZIM1/25-59_208-271        OS Trypanosoma brucei gambiense DAL972
#=GS C9ZIM1/25-59_208-271        DE REL2
#=GS C9ZIM1/25-59_208-271        DR GENE3D; 0b330348df32ba38206d8a677a8f8cb8/25-59_208-271; 
#=GS C9ZIM1/25-59_208-271        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma brucei; Trypanosoma brucei gambiense; 
#=GS C9ZIM1/25-59_208-271        DR EC; 6.5.1.3; 
#=GS E9AUV4/26-60_209-272        AC E9AUV4
#=GS E9AUV4/26-60_209-272        OS Leishmania mexicana MHOM/GT/2001/U1103
#=GS E9AUV4/26-60_209-272        DE Mitochondrial RNA ligase 2
#=GS E9AUV4/26-60_209-272        DR GENE3D; 20a0d1e32712adb82357aad69a97dacc/26-60_209-272; 
#=GS E9AUV4/26-60_209-272        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania mexicana species complex; Leishmania mexicana; 
#=GS E9AUV4/26-60_209-272        DR EC; 6.5.1.3; 
#=GS A0A1G4IFA1/25-59_208-271    AC A0A1G4IFA1
#=GS A0A1G4IFA1/25-59_208-271    OS Trypanosoma equiperdum
#=GS A0A1G4IFA1/25-59_208-271    DE KREL2
#=GS A0A1G4IFA1/25-59_208-271    DR GENE3D; 6c36fe89f55d1308a7852667e8886226/25-59_208-271; 
#=GS A0A1G4IFA1/25-59_208-271    DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Trypanozoon; Trypanosoma equiperdum; 
#=GS A0A1G4IFA1/25-59_208-271    DR EC; 6.5.1.3; 
#=GS Q4DAH8/25-59_208-271        AC Q4DAH8
#=GS Q4DAH8/25-59_208-271        OS Trypanosoma cruzi strain CL Brener
#=GS Q4DAH8/25-59_208-271        DE RNA editing ligase, putative
#=GS Q4DAH8/25-59_208-271        DR GENE3D; 7e132bbf71eaa1256708448484f755e0/25-59_208-271; 
#=GS Q4DAH8/25-59_208-271        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; 
#=GS Q4DAH8/25-59_208-271        DR EC; 6.5.1.3; 
#=GS A4HZ02/26-60_209-272        AC A4HZ02
#=GS A4HZ02/26-60_209-272        OS Leishmania infantum
#=GS A4HZ02/26-60_209-272        DE Mitochondrial RNA ligase 2
#=GS A4HZ02/26-60_209-272        DR GENE3D; 86f81cfa8c7c72b694b616c1a3ccd036/26-60_209-272; 
#=GS A4HZ02/26-60_209-272        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania infantum; 
#=GS A4HZ02/26-60_209-272        DR EC; 6.5.1.3; 
#=GS G0TRC3/54-88_237-300        AC G0TRC3
#=GS G0TRC3/54-88_237-300        OS Trypanosoma vivax Y486
#=GS G0TRC3/54-88_237-300        DE Putative RNA editing complex protein
#=GS G0TRC3/54-88_237-300        DR GENE3D; 97bebd1ad1d1f2e84e4bf6e551135581/54-88_237-300; 
#=GS G0TRC3/54-88_237-300        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Duttonella; Trypanosoma vivax; 
#=GS G0TRC3/54-88_237-300        DR EC; 6.5.1.3; 
#=GS E9AIM1/26-60_209-272        AC E9AIM1
#=GS E9AIM1/26-60_209-272        OS Leishmania braziliensis
#=GS E9AIM1/26-60_209-272        DE Contig, possible fusion of chromosomes 20 and 34
#=GS E9AIM1/26-60_209-272        DR GENE3D; a79203a5ac578e7f7433ec99fe3c85de/26-60_209-272; 
#=GS E9AIM1/26-60_209-272        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania braziliensis species complex; Leishmania braziliensis; 
#=GS E9AIM1/26-60_209-272        DR EC; 6.5.1.3; 
#=GS A0A088RS64/26-60_209-272    AC A0A088RS64
#=GS A0A088RS64/26-60_209-272    OS Leishmania panamensis
#=GS A0A088RS64/26-60_209-272    DE Mitochondrial RNA ligase 2
#=GS A0A088RS64/26-60_209-272    DR GENE3D; b01dea7b2f1b34d5c601c88d991b2f1f/26-60_209-272; 
#=GS A0A088RS64/26-60_209-272    DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Viannia; Leishmania guyanensis species complex; Leishmania panamensis; 
#=GS A0A088RS64/26-60_209-272    DR EC; 6.5.1.3; 
#=GS Q6T452/26-60_209-272        AC Q6T452
#=GS Q6T452/26-60_209-272        OS Leishmania major
#=GS Q6T452/26-60_209-272        DE Mitochondrial RNA ligase 2
#=GS Q6T452/26-60_209-272        DR GENE3D; b0786bacf8f4b28c012f7086a0089add/26-60_209-272; 
#=GS Q6T452/26-60_209-272        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania major species complex; Leishmania major; 
#=GS Q6T452/26-60_209-272        DR EC; 6.5.1.3; 
#=GS A0A061IV48/1-13_162-225     AC A0A061IV48
#=GS A0A061IV48/1-13_162-225     OS Trypanosoma rangeli SC58
#=GS A0A061IV48/1-13_162-225     DE RNA editing ligase
#=GS A0A061IV48/1-13_162-225     DR GENE3D; 2e5d632e410a1baadc2e63be01642a7a/1-13_162-225; 
#=GS A0A061IV48/1-13_162-225     DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Herpetosoma; Trypanosoma rangeli; 
#=GS K2M1X3/25-59_208-271        AC K2M1X3
#=GS K2M1X3/25-59_208-271        OS Trypanosoma cruzi marinkellei
#=GS K2M1X3/25-59_208-271        DE REL2, putative
#=GS K2M1X3/25-59_208-271        DR GENE3D; 32aeee5a4bdb3eb688cf1e6f0be7bc1f/25-59_208-271; 
#=GS K2M1X3/25-59_208-271        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; Trypanosoma cruzi marinkellei; 
#=GS A0A0N0VDB6/26-60_210-273    AC A0A0N0VDB6
#=GS A0A0N0VDB6/26-60_210-273    OS Leptomonas pyrrhocoris
#=GS A0A0N0VDB6/26-60_210-273    DE Putative mitochondrial mitochondrial RNA ligase 2
#=GS A0A0N0VDB6/26-60_210-273    DR GENE3D; 34b89b2f82d41762c773ec66a3da1b6f/26-60_210-273; 
#=GS A0A0N0VDB6/26-60_210-273    DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas pyrrhocoris; 
#=GS A0A061JCF0/25-59_208-271    AC A0A061JCF0
#=GS A0A061JCF0/25-59_208-271    OS Trypanosoma rangeli SC58
#=GS A0A061JCF0/25-59_208-271    DE RNA editing ligase
#=GS A0A061JCF0/25-59_208-271    DR GENE3D; 373c6dae2165af99f1e7c147a8fdbbe0/25-59_208-271; 
#=GS A0A061JCF0/25-59_208-271    DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Herpetosoma; Trypanosoma rangeli; 
#=GS E9BEW8/26-60_209-272        AC E9BEW8
#=GS E9BEW8/26-60_209-272        OS Leishmania donovani BPK282A1
#=GS E9BEW8/26-60_209-272        DE Mitochondrial RNA ligase 2
#=GS E9BEW8/26-60_209-272        DR GENE3D; 8435a47e23ff7f28ed63aba884f9f11b/26-60_209-272; 
#=GS E9BEW8/26-60_209-272        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania; Leishmania donovani species complex; Leishmania donovani; 
#=GS W6KZN3/26-60_209-272        AC W6KZN3
#=GS W6KZN3/26-60_209-272        OS Phytomonas sp. isolate Hart1
#=GS W6KZN3/26-60_209-272        DE Uncharacterized protein
#=GS W6KZN3/26-60_209-272        DR GENE3D; 8b33597cdd7760a8bda3a01ce9f0d24d/26-60_209-272; 
#=GS W6KZN3/26-60_209-272        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Phytomonas; Phytomonas sp. isolate Hart1; 
#=GS A0A0S4JRM1/102-136_286-349  AC A0A0S4JRM1
#=GS A0A0S4JRM1/102-136_286-349  OS Bodo saltans
#=GS A0A0S4JRM1/102-136_286-349  DE RNA editing ligase, putative
#=GS A0A0S4JRM1/102-136_286-349  DR GENE3D; 98c6dc4b05a4e69d34f1d0e1c7e8f743/102-136_286-349; 
#=GS A0A0S4JRM1/102-136_286-349  DR ORG; Eukaryota; Kinetoplastida; Bodonidae; Bodo; Bodo saltans; 
#=GS G0UJ27/25-59_208-271        AC G0UJ27
#=GS G0UJ27/25-59_208-271        OS Trypanosoma congolense IL3000
#=GS G0UJ27/25-59_208-271        DE RNA editing ligase
#=GS G0UJ27/25-59_208-271        DR GENE3D; 9dae799e72294ec3e5b19d60156e513e/25-59_208-271; 
#=GS G0UJ27/25-59_208-271        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Nannomonas; Trypanosoma congolense; 
#=GS W6KUA9/26-60_209-272        AC W6KUA9
#=GS W6KUA9/26-60_209-272        OS Phytomonas sp. isolate EM1
#=GS W6KUA9/26-60_209-272        DE Uncharacterized protein
#=GS W6KUA9/26-60_209-272        DR GENE3D; e690d2f74874f4fe23c79d40bec646c9/26-60_209-272; 
#=GS W6KUA9/26-60_209-272        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Phytomonas; Phytomonas sp. isolate EM1; 
#=GS A0A0N1HTX0/26-60_210-273    AC A0A0N1HTX0
#=GS A0A0N1HTX0/26-60_210-273    OS Leptomonas seymouri
#=GS A0A0N1HTX0/26-60_210-273    DE Mitochondrial RNA ligase 2
#=GS A0A0N1HTX0/26-60_210-273    DR GENE3D; f158fbed8d0cc31b412876744f70c095/26-60_210-273; 
#=GS A0A0N1HTX0/26-60_210-273    DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leptomonas; Leptomonas seymouri; 
#=GS V5ASZ3/25-59_208-271        AC V5ASZ3
#=GS V5ASZ3/25-59_208-271        OS Trypanosoma cruzi Dm28c
#=GS V5ASZ3/25-59_208-271        DE REL2
#=GS V5ASZ3/25-59_208-271        DR GENE3D; fce689f9b137e85354d1b42df83838a0/25-59_208-271; 
#=GS V5ASZ3/25-59_208-271        DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Trypanosoma; Schizotrypanum; Trypanosoma cruzi; 
#=GS A0A0S4JB92/92-155           AC A0A0S4JB92
#=GS A0A0S4JB92/92-155           OS Bodo saltans
#=GS A0A0S4JB92/92-155           DE Mitochondrial RNA ligase 2, putative
#=GS A0A0S4JB92/92-155           DR GENE3D; fe463225a0a1dd6e48b7a025a4705e8d/92-155; 
#=GS A0A0S4JB92/92-155           DR ORG; Eukaryota; Kinetoplastida; Bodonidae; Bodo; Bodo saltans; 
#=GS S9VQJ5/1-13_163-220         AC S9VQJ5
#=GS S9VQJ5/1-13_163-220         OS Angomonas deanei
#=GS S9VQJ5/1-13_163-220         DE RNA-editing ligase
#=GS S9VQJ5/1-13_163-220         DR GENE3D; 17ef0707f5a5f938c0ee4c7c53920493/1-13_163-220; 
#=GS S9VQJ5/1-13_163-220         DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Strigomonadinae; Angomonas; Angomonas deanei; 
#=GS S9UIP8/132-195              AC S9UIP8
#=GS S9UIP8/132-195              OS Angomonas deanei
#=GS S9UIP8/132-195              DE RNA-editing ligase
#=GS S9UIP8/132-195              DR GENE3D; a26fdd467ac455fd188dd082c09c2839/132-195; 
#=GS S9UIP8/132-195              DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Strigomonadinae; Angomonas; Angomonas deanei; 
#=GS S9WJV7/35-92                AC S9WJV7
#=GS S9WJV7/35-92                OS Angomonas deanei
#=GS S9WJV7/35-92                DE RNA-editing ligase
#=GS S9WJV7/35-92                DR GENE3D; b83fcc72a635743b42c366957ea87b2a/35-92; 
#=GS S9WJV7/35-92                DR ORG; Eukaryota; Kinetoplastida; Trypanosomatidae; Strigomonadinae; Angomonas; Angomonas deanei; 
#=GF TC 119.3 1.0E-38
#=GF SQ 26
P86924/25-59_208-271                FERYTEIDNSNERRINALKGCGMFEDEWIATEKVHAVIRGPMSKVAAFDVERFVTTIPPLVGMGNYPLTGNWAEGLVVKHSRLGMAGFDPKGPTVLKFK
P86925/25-59_208-271                FERYTEIDNSNERRINALKGCGMFEDEWIATEKVHAVIRGPMSKVAAFDVERFVTTIPPLVGMGNYPLTGNWAEGLVVKHSRLGMAGFDPKGPTVLKFK
C9ZIM1/25-59_208-271                FERYTEIDNSNERRINALKGCGMFEDEWIATEKVHAVIRGPMSKVAAFDVERFVTTIPPLVGMGNYPLTGNWAEGLVVKHSRLGMAGFDPKGPTVLKFK
E9AUV4/26-60_209-272                FERYSEIENAHSRRIEVLKDAGLFNDEWIATEKVHAIIRGPLSKVAAFDVENFVTTIPPLVGMGDYPLKGNWAEGLVVKHCRRGEPGFDAKGLTIMKFK
A0A1G4IFA1/25-59_208-271            FERYTEIDNSNERRINALKGCGMFEDEWIATEKVHAVIRGPMSKVAAFDVERFVTTIPPLVGMGNYPLTGNWAEGLVVKHSRLGMAGFDPKGPTVLKFK
Q4DAH8/25-59_208-271                FERYTEIENSNERRMSALKACGMFDDEWIATEKVHAIIRGPMSKVAAFDVEHFVTTIPPLVGMGNYPLKGNWAEGLVVKHAKRGTPGFDPKGLTILKFK
A4HZ02/26-60_209-272                FERYSEIENAHSRRIEALKDAGLFNDEWIATEKVHAIIRGPLSKVAAFDVENFVTTIPPLVGMGDYPLKGNWAEGLVVKHCRRGEPGFDAKGLTIMKFK
G0TRC3/54-88_237-300                FERYTEIENSNERRINALKSCGMFEDEWIATEKVHAIIRGPMSKVAAFDVEHFVTTIPPLVGMGNYPLAGNWAEGLVVKHARRGEVGFDPKGVTILKFK
E9AIM1/26-60_209-272                FERYSEIENAHSRRIEALKNAGLFNDEWIATEKVHAIIRGPLNKVTAFDVEHFVTTIPPLVGMGDYPLKGNWSEGLVVKHRRRGEPGFDPKGLTIMKLK
A0A088RS64/26-60_209-272            FERYSEIENAHSRRIEALKNAGLFNDEWIATEKVHAIIRGPLSKVTAFDVENFVTTIPPLVGMGDYPLKGNWSEGLVVKHRRRGEPGFDPKGLTIMKLK
Q6T452/26-60_209-272                FERYSEIENAHSRRIEALKDAGLFNDEWIATEKVHAIIRGPLSKVAAFDVENFVTTIPPLVGMGDYPLKGNWAEGLVVRHCRRGEPDFDAKGLTIMKFK
A0A061IV48/1-13_162-225             ----------------------MFDDEWIATEKVHAIIRGPMSKVAAFDVEHFVTTIPPLVGMGNYPLKGNWAEGLVVKHAKRGMPGFDPKGLTILKFK
K2M1X3/25-59_208-271                FERYTEIENSNERRMNALKACGMFDDEWIATEKVHAIIRGPMSKVAAFDVEHFVTTIPPLVGMGNYPLKGNWAEGLVVKHAKRGMPGFDPKGLTILKFK
A0A0N0VDB6/26-60_210-273            FERYTEIENSNARRISGLKAAGLFNDEWIATEKVHAIIRGPLSKVAAFDVETFTTTIPPLVGMGDYPLKGNWAEGLVVKHHKRGKPGFDPAVLTILKFK
A0A061JCF0/25-59_208-271            FERYTEIENSNERRVSALKACGMFDDEWIATEKVHAIIRGPMSKVAAFDVEHFVTTIPPLVGMGNYPLKGNWAEGLVVKHAKRGMPGFDPKGLTILKFK
E9BEW8/26-60_209-272                FERYSEIENAHSRRIEALKDAGLFNDEWIATEKVHAIIRGPLSKVAAFDVENFVTTIPPLVGMGDYPLKGNWAEGLVVKHCRRGEPGFDAKGLTIMKFK
W6KZN3/26-60_209-272                FERYTEIENSNANRMRGLKESGMFNDEWIATEKVHAIIRGPMSKVAAFDVENFQTTIPTQIGMGNFPLKGNWAEGLVVKHCKRGTPGFDSKGLTILKFK
A0A0S4JRM1/102-136_286-349          FERYSEIDNSNEKRVAAIKQLGMDKDDWIATEKVHPIIRGPLDKVTAFDVETFETTLPPLVGMGNFPLKGNWSEGLVVKHAKRGKIGWECKGPSIIKIK
G0UJ27/25-59_208-271                FERYSEIDNSNERRINALKACGMFEDEWIATEKVHAIIRGPMSKVAAFDVEHFTTTIPPLVGMGNYPLTGNWAEGLVVKHARLGTPGFEPKGPTVLKFK
W6KUA9/26-60_209-272                FERYTEIENTNANRIRTLKEAGLFNDEWIATEKVHAIIRGPMSKVAAFDVENFQTTIPPQVGMGNFPLKGNWAEGLVVKHSKRGMPGFDPKGLTILKFK
A0A0N1HTX0/26-60_210-273            FERYTEIENSNARRINGIKAAGLFNDEWIATEKVHAIIRGPLSKVAAFDVETFTTTIPPLVGMGNYPLKGNWAEGLVVKHHKRGKPGFDPAGITILKFK
V5ASZ3/25-59_208-271                FERYTEIENSNERRMSALKACGMFDDEWIATEKVHAIIRGPMSKVAAFDVEHFVTTIPPLVGMGNYPLKGNWAEGLVVKHAKRGTPGFDPKGLTILKFK
A0A0S4JB92/92-155                   -----------------------------------PIIRGPLDKVTAFDVETFETTLPPLVGMGNFPLKGNWSEGLVVKHSKRGKIGWECKGPTIIKIK
S9VQJ5/1-13_163-220                 ----------------------MALDEWIATEKVHPILRGPLYKILAFNVDKFQTTIPAQLGLGNYPLQDNWAEGIVVRHARRGEPLFDK------THS
S9UIP8/132-195                      -----------------------------------ALVRGTLDDCLAFDVENFMTPLPALLGLGNYPLEHNLAEGLVIRHVRHGDPKLSNGVPTIIKLR
S9WJV7/35-92                        -----------------------------------PILRGPLYKILAFNVDKFQTTIPAQLGLGNYPLQDNWAEGIVVRHARRGEPLFDK------THS
#=GC scorecons                      333323323221232123311333254555555556779986576599797494987966697978995697799798794769365674443554756
#=GC scorecons_70                   ___________________________________*******_**_*****_*_**************_***********_*_*___**_______*_*
#=GC scorecons_80                   ____________________________________*_***__*__*****_*_****___*******__**********___*_______________
#=GC scorecons_90                   ______________________________________**______**_*__*_*__*___*_*__**__*__**_**_*___*_______________
//