# STOCKHOLM 1.0
#=GF ID 3.30.1370.50/FF/1540
#=GF DE Protein SQS1
#=GF AC 3.30.1370.50/FF/1540
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 61.840
#=GS P53866/595-660      AC P53866
#=GS P53866/595-660      OS Saccharomyces cerevisiae S288C
#=GS P53866/595-660      DE Protein SQS1
#=GS P53866/595-660      DR GENE3D; 67df0650e95d41a13587713e6a28d8a9/595-660; 
#=GS P53866/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P53866/595-660      DR GO; GO:0000398; GO:0005515; GO:0006364; GO:0030490; GO:0030686; GO:0030687; GO:0030688; GO:0032781; GO:0051096; 
#=GS G2WLN9/595-660      AC G2WLN9
#=GS G2WLN9/595-660      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WLN9/595-660      DE K7_Sqs1p
#=GS G2WLN9/595-660      DR GENE3D; 00c4d9de370552451e9798b5b098d3e6/595-660; 
#=GS G2WLN9/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8RBY1/590-656  AC A0A0L8RBY1
#=GS A0A0L8RBY1/590-656  OS Saccharomyces eubayanus
#=GS A0A0L8RBY1/590-656  DE SQS1-like protein
#=GS A0A0L8RBY1/590-656  DR GENE3D; 02e532eb7b0879601f060538b7781256/590-656; 
#=GS A0A0L8RBY1/590-656  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces eubayanus; 
#=GS Q6FP19/622-688      AC Q6FP19
#=GS Q6FP19/622-688      OS Candida glabrata CBS 138
#=GS Q6FP19/622-688      DE Protein SQS1
#=GS Q6FP19/622-688      DR GENE3D; 149a67e85ab1fd0211ae45eebbd51a5b/622-688; 
#=GS Q6FP19/622-688      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; [Candida] glabrata; 
#=GS E7KTB7/595-660      AC E7KTB7
#=GS E7KTB7/595-660      OS Saccharomyces cerevisiae Lalvin QA23
#=GS E7KTB7/595-660      DE Sqs1p
#=GS E7KTB7/595-660      DR GENE3D; 32d8a2bc2fc440a101d3d3852df589ae/595-660; 
#=GS E7KTB7/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8ZG09/595-660      AC C8ZG09
#=GS C8ZG09/595-660      OS Saccharomyces cerevisiae EC1118
#=GS C8ZG09/595-660      DE Sqs1p
#=GS C8ZG09/595-660      DR GENE3D; 32d8a2bc2fc440a101d3d3852df589ae/595-660; 
#=GS C8ZG09/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8VJ81/595-660  AC A0A0L8VJ81
#=GS A0A0L8VJ81/595-660  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VJ81/595-660  DE SQS1p Protein that stimulates the ATPase and helicase activities of Prp43p
#=GS A0A0L8VJ81/595-660  DR GENE3D; 405808b95ff354e014ca3daa3aa6fc3c/595-660; 
#=GS A0A0L8VJ81/595-660  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS A6ZRL6/595-660      AC A6ZRL6
#=GS A6ZRL6/595-660      OS Saccharomyces cerevisiae YJM789
#=GS A6ZRL6/595-660      DE Protein SQS1
#=GS A6ZRL6/595-660      DR GENE3D; 4fe11d80e48f1d686c0ec84c6266b6fd/595-660; 
#=GS A6ZRL6/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS H0GMB1/595-660      AC H0GMB1
#=GS H0GMB1/595-660      OS Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7
#=GS H0GMB1/595-660      DE Sqs1p
#=GS H0GMB1/595-660      DR GENE3D; 5a63e42386daead57276a6d8a22af029/595-660; 
#=GS H0GMB1/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae x Saccharomyces kudriavzevii; 
#=GS J5RJI2/591-655      AC J5RJI2
#=GS J5RJI2/591-655      OS Saccharomyces kudriavzevii IFO 1802
#=GS J5RJI2/591-655      DE SQS1-like protein
#=GS J5RJI2/591-655      DR GENE3D; 62d327455d64ab8830ead0452e31ea52/591-655; 
#=GS J5RJI2/591-655      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS N1NY27/595-660      AC N1NY27
#=GS N1NY27/595-660      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1NY27/595-660      DE Sqs1p
#=GS N1NY27/595-660      DR GENE3D; 67df0650e95d41a13587713e6a28d8a9/595-660; 
#=GS N1NY27/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7QJP2/595-660      AC E7QJP2
#=GS E7QJP2/595-660      OS Saccharomyces cerevisiae VL3
#=GS E7QJP2/595-660      DE Sqs1p
#=GS E7QJP2/595-660      DR GENE3D; 67df0650e95d41a13587713e6a28d8a9/595-660; 
#=GS E7QJP2/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B3LP68/595-660      AC B3LP68
#=GS B3LP68/595-660      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LP68/595-660      DE Uncharacterized protein
#=GS B3LP68/595-660      DR GENE3D; 90b3e05abf60888d650b7062deadbae2/595-660; 
#=GS B3LP68/595-660      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0W0DAY4/622-688  AC A0A0W0DAY4
#=GS A0A0W0DAY4/622-688  OS [Candida] glabrata
#=GS A0A0W0DAY4/622-688  DE Protein SQS1
#=GS A0A0W0DAY4/622-688  DR GENE3D; 9c9b670fb7d1f23fbe3f24b06d55cecd/622-688; 
#=GS A0A0W0DAY4/622-688  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; [Candida] glabrata; 
#=GS C7GPD3/572-637      AC C7GPD3
#=GS C7GPD3/572-637      OS Saccharomyces cerevisiae JAY291
#=GS C7GPD3/572-637      DE Sqs1p
#=GS C7GPD3/572-637      DR GENE3D; a90de722c4c2c17c1f8acbcbd16cc9ba/572-637; 
#=GS C7GPD3/572-637      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7Q888/428-493      AC E7Q888
#=GS E7Q888/428-493      OS Saccharomyces cerevisiae FostersB
#=GS E7Q888/428-493      DE Sqs1p
#=GS E7Q888/428-493      DR GENE3D; d23646773a1981d807aba90ce0aa4fc0/428-493; 
#=GS E7Q888/428-493      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A7TQN2/590-657      AC A7TQN2
#=GS A7TQN2/590-657      OS Vanderwaltozyma polyspora DSM 70294
#=GS A7TQN2/590-657      DE Protein SQS1
#=GS A7TQN2/590-657      DR GENE3D; d29a0713095c848536bbbe0c285c208f/590-657; 
#=GS A7TQN2/590-657      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Vanderwaltozyma; Vanderwaltozyma polyspora; 
#=GF TC 129.6 2.5E-41
#=GF SQ 17
P53866/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
G2WLN9/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
A0A0L8RBY1/590-656          FHVQNIRDEFELFLSR-NKDRLTFPPLDPHGNKTVMKLAKHYNMKTSKIGKANHTSVVVEKVKKTKWS
Q6FP19/622-688              FHVQNIRDEFELFLTR-NKDRMSFPPLDPHGNKVITKFATCYNIKSSKVGKGNHTHIMVEKVKKTKWS
E7KTB7/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
C8ZG09/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
A0A0L8VJ81/595-660          LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
A6ZRL6/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
H0GMB1/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
J5RJI2/591-655              -HIQNIRDEFESFFAR-NKDRLTFPPLDPHGNKTVMKIAKHYNLKSSKIGKANHTSVVVEKVKKTRW-
N1NY27/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
E7QJP2/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
B3LP68/595-660              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
A0A0W0DAY4/622-688          FHVQNIRDEFELFLTR-NKDRMSFPPLDPHGNKVITKFATCYNIKSSKVGKGNHTHIMVEKVKKTKWS
C7GPD3/572-637              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
E7Q888/428-493              LHIQNIKDEFESFLSR-NNDRLTFPPLDPHGNKTVMKIAKHYNMKSSKIGKANHTSVVVEKIKKTKW-
A7TQN2/590-657              LHVLNIKEEFELFIRRSDKEALVFPPLDPHGNKTITKFAKFYFMKTNKRGRGNQTHIFVQKVKATRYN
#=GC scorecons              59769977999596490767675999999999967595965966967959769795759797969761
#=GC scorecons_70           _**********_**_*_*_***_************_*_**_*_*****_**_***_*_*********_
#=GC scorecons_80           _*__**_****_*__*_*_*_*_**********___*_*__*__*__*_**_***___***_*_**__
#=GC scorecons_90           _*__**__***_*__*_______**********___*_*__*__*__*_*__*_*___*_*_*_*___
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