# STOCKHOLM 1.0
#=GF ID 3.30.1200.10/FF/1294
#=GF DE UPF0235 protein A1G_07140
#=GF AC 3.30.1200.10/FF/1294
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 53.761
#=GS Q9ZCC0/4-103      AC Q9ZCC0
#=GS Q9ZCC0/4-103      OS Rickettsia prowazekii str. Madrid E
#=GS Q9ZCC0/4-103      DE UPF0235 protein RP839
#=GS Q9ZCC0/4-103      DR GENE3D; 39460fb8583b5120c28a572f22261ce3/4-103; 
#=GS Q9ZCC0/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; typhus group; Rickettsia prowazekii; 
#=GS D5AYC6/4-103      AC D5AYC6
#=GS D5AYC6/4-103      OS Rickettsia prowazekii str. Rp22
#=GS D5AYC6/4-103      DE UPF0235 protein rpr22_CDS819
#=GS D5AYC6/4-103      DR GENE3D; 39460fb8583b5120c28a572f22261ce3/4-103; 
#=GS D5AYC6/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; typhus group; Rickettsia prowazekii; 
#=GS A0A1C3EUB6/5-103  AC A0A1C3EUB6
#=GS A0A1C3EUB6/5-103  OS Rickettsia sp. wb
#=GS A0A1C3EUB6/5-103  DE UPF0235 protein A8V33_03840
#=GS A0A1C3EUB6/5-103  DR GENE3D; 611dbc792a1ef1a68e3e58691a6da723/5-103; 
#=GS A0A1C3EUB6/5-103  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; Rickettsia sp. wb; 
#=GS H8K3I0/4-103      AC H8K3I0
#=GS H8K3I0/4-103      OS Rickettsia amblyommatis str. GAT-30V
#=GS H8K3I0/4-103      DE UPF0235 protein MCE_00085
#=GS H8K3I0/4-103      DR GENE3D; 7465974ec8377410174b3dc357c11b97/4-103; 
#=GS H8K3I0/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia amblyommatis; 
#=GS A0A0F3N0P1/4-103  AC A0A0F3N0P1
#=GS A0A0F3N0P1/4-103  OS Rickettsia amblyommatis str. Ac/Pa
#=GS A0A0F3N0P1/4-103  DE UPF0235 protein APHACPA_0255
#=GS A0A0F3N0P1/4-103  DR GENE3D; 7465974ec8377410174b3dc357c11b97/4-103; 
#=GS A0A0F3N0P1/4-103  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia amblyommatis; 
#=GS A0A0F3R3B2/4-103  AC A0A0F3R3B2
#=GS A0A0F3R3B2/4-103  OS Rickettsia amblyommatis str. Darkwater
#=GS A0A0F3R3B2/4-103  DE UPF0235 protein RAMDARK_0035
#=GS A0A0F3R3B2/4-103  DR GENE3D; 7465974ec8377410174b3dc357c11b97/4-103; 
#=GS A0A0F3R3B2/4-103  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia amblyommatis; 
#=GS H8LMW6/4-103      AC H8LMW6
#=GS H8LMW6/4-103      OS Rickettsia slovaca str. D-CWPP
#=GS H8LMW6/4-103      DE UPF0235 protein MC3_07215
#=GS H8LMW6/4-103      DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS H8LMW6/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia slovaca; 
#=GS G0GWD3/4-103      AC G0GWD3
#=GS G0GWD3/4-103      OS Rickettsia heilongjiangensis 054
#=GS G0GWD3/4-103      DE UPF0235 protein Rh054_07065
#=GS G0GWD3/4-103      DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS G0GWD3/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia heilongjiangensis; 
#=GS H8KAL5/4-103      AC H8KAL5
#=GS H8KAL5/4-103      OS Rickettsia montanensis str. OSU 85-930
#=GS H8KAL5/4-103      DE UPF0235 protein MCI_03780
#=GS H8KAL5/4-103      DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS H8KAL5/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia montanensis; 
#=GS Q92G24/4-103      AC Q92G24
#=GS Q92G24/4-103      OS Rickettsia conorii str. Malish 7
#=GS Q92G24/4-103      DE UPF0235 protein RC1301
#=GS Q92G24/4-103      DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS Q92G24/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia conorii; 
#=GS C3PLX4/4-103      AC C3PLX4
#=GS C3PLX4/4-103      OS Rickettsia africae ESF-5
#=GS C3PLX4/4-103      DE UPF0235 protein RAF_ORF1191
#=GS C3PLX4/4-103      DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS C3PLX4/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia africae; 
#=GS Q7PA41/4-103      AC Q7PA41
#=GS Q7PA41/4-103      OS Rickettsia sibirica 246
#=GS Q7PA41/4-103      DE UPF0235 protein rsib_orf794
#=GS Q7PA41/4-103      DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS Q7PA41/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia sibirica subgroup; Rickettsia sibirica; 
#=GS A0A0F3QLT9/4-103  AC A0A0F3QLT9
#=GS A0A0F3QLT9/4-103  OS Rickettsia parkeri str. Grand Bay
#=GS A0A0F3QLT9/4-103  DE UPF0235 protein RPAGB_0240
#=GS A0A0F3QLT9/4-103  DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS A0A0F3QLT9/4-103  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia parkeri; 
#=GS G4KLQ4/4-103      AC G4KLQ4
#=GS G4KLQ4/4-103      OS Rickettsia japonica YH
#=GS G4KLQ4/4-103      DE UPF0235 protein RJP_0955
#=GS G4KLQ4/4-103      DR GENE3D; 752a58dfc6dc19666b97c388a844da35/4-103; 
#=GS G4KLQ4/4-103      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia japonica; 
#=GS A8F059/5-104      AC A8F059
#=GS A8F059/5-104      OS Rickettsia canadensis str. McKiel
#=GS A8F059/5-104      DE UPF0235 protein A1E_05380
#=GS A8F059/5-104      DR GENE3D; b634dd919ec21f2be8c61efa465b5ed3/5-104; 
#=GS A8F059/5-104      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group; Rickettsia canadensis; 
#=GS A8GQ50/6-104      AC A8GQ50
#=GS A8GQ50/6-104      OS Rickettsia akari str. Hartford
#=GS A8GQ50/6-104      DE UPF0235 protein A1C_06510
#=GS A8GQ50/6-104      DR GENE3D; e48fe4cd19963ff251478338aa9499cf/6-104; 
#=GS A8GQ50/6-104      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia akari; 
#=GS Q68Y09/4-104      AC Q68Y09
#=GS Q68Y09/4-104      OS Rickettsia typhi str. Wilmington
#=GS Q68Y09/4-104      DE UPF0235 protein RT0827
#=GS Q68Y09/4-104      DR GENE3D; e9db0ab579467c520536fd68cdac1dc2/4-104; 
#=GS Q68Y09/4-104      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; typhus group; Rickettsia typhi; 
#=GS Q4UJV6/5-104      AC Q4UJV6
#=GS Q4UJV6/5-104      OS Rickettsia felis URRWXCal2
#=GS Q4UJV6/5-104      DE UPF0235 protein RF_1332
#=GS Q4UJV6/5-104      DR GENE3D; fa51d69f0444ae9c5c626122cc4800cd/5-104; 
#=GS Q4UJV6/5-104      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia felis; 
#=GS A0A0F3MVQ6/5-104  AC A0A0F3MVQ6
#=GS A0A0F3MVQ6/5-104  OS Rickettsia felis str. Pedreira
#=GS A0A0F3MVQ6/5-104  DE UPF0235 protein RFEPED_1024
#=GS A0A0F3MVQ6/5-104  DR GENE3D; fa51d69f0444ae9c5c626122cc4800cd/5-104; 
#=GS A0A0F3MVQ6/5-104  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia felis; 
#=GS A0A0C2QYA0/5-104  AC A0A0C2QYA0
#=GS A0A0C2QYA0/5-104  OS Rickettsia asembonensis
#=GS A0A0C2QYA0/5-104  DE UPF0235 protein SB78_03225
#=GS A0A0C2QYA0/5-104  DR GENE3D; fa51d69f0444ae9c5c626122cc4800cd/5-104; 
#=GS A0A0C2QYA0/5-104  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia asembonensis; 
#=GF TC 162.1 1.2E-51
#=GF SQ 20
Q9ZCC0/4-103              FYIYNSFKHEALINVKVKPYAKQNLIGNFVIINNIPYIKLAIKATPEQGKANEGIIHYLAKEWELSRSSIEIIKGHTHSLKTILIKNINEDYLNLIINAY-
D5AYC6/4-103              FYIYNSFKHEALINVKVKPYAKQNLIGNFVIINNIPYIKLAIKATPEQGKANEGIIHYLAKEWELSRSSIEIIKGHTHSLKTILIKNINEDYLNLIINAY-
A0A1C3EUB6/5-103          --IYNPLSKTAFLNIKVKAAAKINDIKEFIIINDIPHLKLSIKALPEQSKANEEIINFLAKEWQLLRSNLEITKGHTNSLKTILIKNIDEEYLNLILKSYI
H8K3I0/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPAQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNIHEDYLNLIINSY-
A0A0F3N0P1/4-103          FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPAQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNIHEDYLNLIINSY-
A0A0F3R3B2/4-103          FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPAQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNIHEDYLNLIINSY-
H8LMW6/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
G0GWD3/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
H8KAL5/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
Q92G24/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
C3PLX4/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
Q7PA41/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
A0A0F3QLT9/4-103          FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
G4KLQ4/4-103              FYNYNSSSHQALLSFKVKPNSKQNLISNFVIINNIPYLKLSIKAIPEQGKANEEIINYLAKEWKLSRSNIEIIKGHTHSLKTILIKNINEDYLNLIINSY-
A8F059/5-104              -YNYNSSSNQALLNLKVKPDSKQNLISDFVIINNLPYLKLFIKTAPEQGKANEEIINYLAKAWKLSRSNIEIIKGHTHSLKTILIKNIDEDYLNSIINSYI
A8GQ50/6-104              --NYNSSLHQVLLNLKVKPNSKQNLISNFVIINNIPYLKLSIKATPEKGKANEEIINYLAKAWKLSRSNIEIIKGHTHSVKTILIKNINEDYLNFIINSYI
Q68Y09/4-104              FYIYNNFKNEALINIKVKPYSKQNLINNFVIINNIPYIKLSITAAPEQGKANEGIINYLAKEWKLSRSSIEIIKGHTHSLKTILIKNINEDYLNLIINSYI
Q4UJV6/5-104              -YNYNSSSHQVLLNLKVKPNSKQNLISDFVIINNIPYLKLSIKATPEQGKANEEIINYLAKEWKLSRKDIEIIKGHTNSLKTILIKNIDEDYLNLIINSYI
A0A0F3MVQ6/5-104          -YNYNSSSHQVLLNLKVKPNSKQNLISDFVIINNIPYLKLSIKATPEQGKANEEIINYLAKEWKLSRKDIEIIKGHTNSLKTILIKNIDEDYLNLIINSYI
A0A0C2QYA0/5-104          -YNYNSSSHQVLLNLKVKPNSKQNLISDFVIINNIPYLKLSIKATPEQGKANEEIINYLAKEWKLSRKDIEIIKGHTNSLKTILIKNIDEDYLNLIINSYI
#=GC scorecons            35599655657776599974697969569899978987996988497879999699789997969797579979999698999999995989997977791
#=GC scorecons_70         ___***__*_****_****_******_*****************_***********************_*******************_***********_
#=GC scorecons_80         ___**______**__****__*_*_*__************_***_********_*********_***__********_**********_***********_
#=GC scorecons_90         ___**__________***___*_*_*__*****_***_**_*_*_*_*_****_**_****_*_*_*___**_****_**********_*****_*___*_
//