# STOCKHOLM 1.0
#=GF ID 3.20.20.70/FF/119545
#=GF DE Heme d1 biosynthesis protein NirJ
#=GF AC 3.20.20.70/FF/119545
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 33.663
#=GS Q5LL02/27-237      AC Q5LL02
#=GS Q5LL02/27-237      OS Ruegeria pomeroyi DSS-3
#=GS Q5LL02/27-237      DE Nitrite reductase heme biosynthesis J protein
#=GS Q5LL02/27-237      DR GENE3D; ac850bc9d5c065d4ad9a27dd06d48a0c/27-237; 
#=GS Q5LL02/27-237      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria pomeroyi; 
#=GS Q5LL02/27-237      DR GO; GO:0003824; GO:0006783; GO:0019333; 
#=GS P95416/22-249      AC P95416
#=GS P95416/22-249      OS Pseudomonas aeruginosa
#=GS P95416/22-249      DE NirJ
#=GS P95416/22-249      DR GENE3D; 73150f5cf1207ef5286c22fddeed4134/22-249; 
#=GS P95416/22-249      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS P95416/22-249      DR GO; GO:0006783; 
#=GS G3XD10/22-249      AC G3XD10
#=GS G3XD10/22-249      OS Pseudomonas aeruginosa PAO1
#=GS G3XD10/22-249      DE Heme d1 biosynthesis protein NirJ
#=GS G3XD10/22-249      DR GENE3D; 73150f5cf1207ef5286c22fddeed4134/22-249; 
#=GS G3XD10/22-249      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS G3XD10/22-249      DR GO; GO:0006783; 
#=GS A0A1F0IX20/22-249  AC A0A1F0IX20
#=GS A0A1F0IX20/22-249  OS Pseudomonas sp. HMSC065H01
#=GS A0A1F0IX20/22-249  DE Heme d1 biosynthesis radical SAM protein NirJ
#=GS A0A1F0IX20/22-249  DR GENE3D; 73150f5cf1207ef5286c22fddeed4134/22-249; 
#=GS A0A1F0IX20/22-249  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. HMSC065H01; 
#=GF TC 422.1 4.0E-131
#=GF SQ 4
Q5LL02/27-237              -----PVVIWNLTRRCNLKCRHCYTVSADVDFPGELSHEQAMETLEDLGRFKVPAIILSGGEPLDRFDFFDIAMRARQMVPMLALSTNGTRIHGETADRIADVGFSYVGISLDGIGATNDWFRGVEGAFADALRGVRACKARGIKVGLRFCLTEGTQHHLPNLLQLCDDEGVDKFYLSHLVYAGRGDKNRGEDAAHLRTRHAMDLLLDRA------------WVAAAE
P95416/22-249              GGRRAPVVIWNLLRRCNLTCKHCYSTSADSDFRGELETAEILRGIDDLRAAGVRVLILSGGEPLMHPDLFEIAAHARQAGMFVALSSNGTLIDEGNIQRVAEARFDYVGISLDGLRETHDRFRQKQGSFDAALAAMRLCREADIRVGMRTTLTEENAAQLPALLDLMRELDVQKFYLSHLNYSGRGRRSRALDAHHRRTREALALLFERADQDIRQGRDSDFVTGNND
G3XD10/22-249              GGRRAPVVIWNLLRRCNLTCKHCYSTSADSDFRGELETAEILRGIDDLRAAGVRVLILSGGEPLMHPDLFEIAAHARQAGMFVALSSNGTLIDEGNIQRVAEARFDYVGISLDGLRETHDRFRQKQGSFDAALAAMRLCREADIRVGMRTTLTEENAAQLPALLDLMRELDVQKFYLSHLNYSGRGRRSRALDAHHRRTREALALLFERADQDIRQGRDSDFVTGNND
A0A1F0IX20/22-249          GGRRAPVVIWNLLRRCNLTCKHCYSTSADSDFRGELETAEILRGIDDLRAAGVRVLILSGGEPLMHPDLFEIAAHARQAGMFVALSSNGTLIDEGNIQRVAEARFDYVGISLDGLRETHDRFRQKQGSFDAALAAMRLCREADIRVGMRTTLTEENAAQLPALLDLMRELDVQKFYLSHLNYSGRGRRSRALDAHHRRTREALALLFERADQDIRQGRDSDFVTGNND
#=GC scorecons             222229999999499999496999449994994999444545445699443494459999999935395969945999433459994999394444449696449499999999544949499435949449944594964449699593499944435994994934624949999999394999464942993939994954995699222222222222244446
#=GC scorecons_70          _____*******_*****_*****__***_**_***_________***____*___********___*_****__***_____***_***_*______****__*_********___*_*_**___*_*__**___*_**___****_*__***_____**_**_*__*__*_*******_*_***_*_*__**_*_***_*__**_***_________________*
#=GC scorecons_80          _____*******_*****_*_***__***_**_***__________**____*___********___*_*_**__***_____***_***_*______*_*___*_********___*_*_**___*_*__**___*_*____*_**_*__***_____**_**_*_____*_*******_*_***___*__**_*_***_*__**__**__________________
#=GC scorecons_90          _____*******_*****_*_***__***_**_***__________**____*___********___*_*_**__***_____***_***_*______*_*___*_********___*_*_**___*_*__**___*_*____*_**_*__***_____**_**_*_____*_*******_*_***___*__**_*_***_*__**__**__________________
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