# STOCKHOLM 1.0
#=GF ID 2.60.40.1090/FF/1787
#=GF DE Long polar fimbrial protein LpfA
#=GF AC 2.60.40.1090/FF/1787
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 23.356
#=GS P43660/28-178      AC P43660
#=GS P43660/28-178      OS Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
#=GS P43660/28-178      DE Long polar fimbria protein A
#=GS P43660/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS P43660/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0F5BAR0/24-174  AC A0A0F5BAR0
#=GS A0A0F5BAR0/24-174  OS Salmonella enterica subsp. salamae
#=GS A0A0F5BAR0/24-174  DE Long polar fimbrial protein LpfA
#=GS A0A0F5BAR0/24-174  DR GENE3D; 02ff5aaa4cbaa0dbeeb6c62c711f0981/24-174; 
#=GS A0A0F5BAR0/24-174  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. salamae; 
#=GS F5S376/28-178      AC F5S376
#=GS F5S376/28-178      OS Enterobacter hormaechei ATCC 49162
#=GS F5S376/28-178      DE Long polar fimbrial protein A
#=GS F5S376/28-178      DR GENE3D; 5d156fc372433e184880d611bbc541ff/28-178; 
#=GS F5S376/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter hormaechei; Enterobacter hormaechei subsp. hormaechei; 
#=GS T2Q9G1/28-178      AC T2Q9G1
#=GS T2Q9G1/28-178      OS Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0267
#=GS T2Q9G1/28-178      DE Fimbrial protein
#=GS T2Q9G1/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS T2Q9G1/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS S4KLD1/28-178      AC S4KLD1
#=GS S4KLD1/28-178      OS Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0286
#=GS S4KLD1/28-178      DE Fimbrial protein
#=GS S4KLD1/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS S4KLD1/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A1M4AFS8/28-178  AC A0A1M4AFS8
#=GS A0A1M4AFS8/28-178  OS Salmonella enterica subsp. enterica serovar Infantis str. CVM N29304
#=GS A0A1M4AFS8/28-178  DE Long polar fimbrial protein LpfA
#=GS A0A1M4AFS8/28-178  DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS A0A1M4AFS8/28-178  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0F6B8C4/28-178  AC A0A0F6B8C4
#=GS A0A0F6B8C4/28-178  OS Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
#=GS A0A0F6B8C4/28-178  DE Long polar fimbrial protein A
#=GS A0A0F6B8C4/28-178  DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS A0A0F6B8C4/28-178  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A0H3NHA1/28-178  AC A0A0H3NHA1
#=GS A0A0H3NHA1/28-178  OS Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
#=GS A0A0H3NHA1/28-178  DE Long polar fimbria protein A (LpfA)
#=GS A0A0H3NHA1/28-178  DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS A0A0H3NHA1/28-178  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS G5SI58/28-178      AC G5SI58
#=GS G5SI58/28-178      OS Salmonella enterica subsp. enterica serovar Wandsworth str. A4-580
#=GS G5SI58/28-178      DE Fimbriae-like adhesin SfmA
#=GS G5SI58/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS G5SI58/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS S4K6G3/28-178      AC S4K6G3
#=GS S4K6G3/28-178      OS Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0284
#=GS S4K6G3/28-178      DE Fimbrial protein
#=GS S4K6G3/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS S4K6G3/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS A0A1M4A644/28-178  AC A0A1M4A644
#=GS A0A1M4A644/28-178  OS Salmonella enterica subsp. enterica serovar Infantis str. CVM N26093
#=GS A0A1M4A644/28-178  DE Long polar fimbrial protein LpfA
#=GS A0A1M4A644/28-178  DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS A0A1M4A644/28-178  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS E8XFV5/28-178      AC E8XFV5
#=GS E8XFV5/28-178      OS Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74
#=GS E8XFV5/28-178      DE Long polar fimbrial protein A
#=GS E8XFV5/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS E8XFV5/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS M7S4I5/28-178      AC M7S4I5
#=GS M7S4I5/28-178      OS Salmonella enterica subsp. enterica serovar Dublin str. UC16
#=GS M7S4I5/28-178      DE Fimbrial protein
#=GS M7S4I5/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS M7S4I5/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS Q57II5/28-178      AC Q57II5
#=GS Q57II5/28-178      OS Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67
#=GS Q57II5/28-178      DE Long polar fimbria
#=GS Q57II5/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS Q57II5/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS C0Q1A1/28-178      AC C0Q1A1
#=GS C0Q1A1/28-178      OS Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594
#=GS C0Q1A1/28-178      DE Long polar fimbria
#=GS C0Q1A1/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS C0Q1A1/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS S4KF56/28-178      AC S4KF56
#=GS S4KF56/28-178      OS Salmonella enterica subsp. enterica serovar Enteritidis str. 2010K-0271
#=GS S4KF56/28-178      DE Fimbrial protein
#=GS S4KF56/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS S4KF56/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS T2Q1F1/28-178      AC T2Q1F1
#=GS T2Q1F1/28-178      OS Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K1726
#=GS T2Q1F1/28-178      DE Fimbrial protein
#=GS T2Q1F1/28-178      DR GENE3D; 9f480636d62bf9d938bc599700e70dee/28-178; 
#=GS T2Q1F1/28-178      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GS G5LV77/3-148       AC G5LV77
#=GS G5LV77/3-148       OS Salmonella enterica subsp. enterica serovar Alachua str. R6-377
#=GS G5LV77/3-148       DE Fimbrial subunit
#=GS G5LV77/3-148       DR GENE3D; df35f93b5a2ee7a8e3f0fbc3cccc71c1/3-148; 
#=GS G5LV77/3-148       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; 
#=GF TC 313.2 3.8E-98
#=GF SQ 18
P43660/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
A0A0F5BAR0/24-174          GDGTIKFTGEIVDSPCTVSTDSQNQEVVLGQVKKSVFTAVGDKSVAKPFEIKLEDCDITTNTKVNVSFAGVGDTDNPKLVSVSTEAGAATGVGIGIYDNSNTAVDMNTGKSSTTLSAGQTVLYYTASYVATKDTVTTGYGNAEVDFNLTYE
F5S376/28-178              GDGTVKFTGEIVDSPCVVSTDSQNQEVVLGQVKKTVFKAVGDKSVSKPFQIKLEDCDISSKTKVNVNFTGVADADDAKLVSVSTEAGAASGVGIGIYDNANKLVDMNSGKSTTTLSAGQTVLYYTANYVATKAAVTTGYGNAEVDFNLSYE
T2Q9G1/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
S4KLD1/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
A0A1M4AFS8/28-178          GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
A0A0F6B8C4/28-178          GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
A0A0H3NHA1/28-178          GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
G5SI58/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
S4K6G3/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
A0A1M4A644/28-178          GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
E8XFV5/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
M7S4I5/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
Q57II5/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
C0Q1A1/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
S4KF56/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
T2Q1F1/28-178              GDGTIKFTGEIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
G5LV77/3-148               -DGTI----EIVDAPCVVSTDSQNQEVVLGQVKKNIFKAIGDKSSSKPFQIKLEDCDITSNTKVNVSFNGVGDTDDATLVSVNTEAGAATGVGIGIYDNANKLVEMNTGKSTTTLAAGQTVLYYTANYVATKDTVTTGYGNAEVDFNLSYE
#=GC scorecons             7999777779999599699999999999999999569696999956999799999999767999997959979797659999599999979999999996966969979996999599999999996999996799999999999999699
#=GC scorecons_70          *************_********************_**_******_***********************_********_****_******************__************_***********************************
#=GC scorecons_80          _****____****_**_*****************__*_*_****__***_********___*****_*_**_***___****_******_*********_*__*_**_***_***_**********_*****_***************_**
#=GC scorecons_90          _***_____****_**_*****************__*_*_****__***_********___*****_*_**_*_*___****_******_*********_*__*_**_***_***_**********_*****__**************_**
//