# STOCKHOLM 1.0 #=GF ID 2.60.40.10/FF/24155 #=GF DE T-cell receptor alpha chain C region #=GF AC 2.60.40.10/FF/24155 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 32.221 #=GS 1fytD01/1-114 AC P01848 #=GS 1fytD01/1-114 OS Homo sapiens #=GS 1fytD01/1-114 DE T-cell receptor alpha chain C region #=GS 1fytD01/1-114 DR CATH; 1fyt; D:1-116; #=GS 1fytD01/1-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 1fytD01/1-114 DR GO; GO:0005886; GO:0031295; GO:0050776; GO:0050852; #=GS 1j8hD01/1-114 AC P01848 #=GS 1j8hD01/1-114 OS Homo sapiens #=GS 1j8hD01/1-114 DE T-cell receptor alpha chain C region #=GS 1j8hD01/1-114 DR CATH; 1j8h; D:1-116; #=GS 1j8hD01/1-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS 1j8hD01/1-114 DR GO; GO:0005886; GO:0031295; GO:0050776; GO:0050852; #=GS P01737/18-135 AC P01737 #=GS P01737/18-135 OS Homo sapiens #=GS P01737/18-135 DE T-cell receptor alpha chain V region PY14 #=GS P01737/18-135 DR GENE3D; 712412f5df58d99018e00a94748f89fc/18-135; #=GS P01737/18-135 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS P01737/18-135 DR GO; GO:0005886; GO:0006955; GO:0031295; GO:0042287; GO:0042605; GO:0050776; GO:0050852; #=GS A0A0B4J246/18-113 AC A0A0B4J246 #=GS A0A0B4J246/18-113 OS Homo sapiens #=GS A0A0B4J246/18-113 DE T cell receptor alpha variable 8-4 #=GS A0A0B4J246/18-113 DR GENE3D; c533a9c5710d3262ac89dbcdf448168a/18-113; #=GS A0A0B4J246/18-113 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS A0A0B4J237/19-113 AC A0A0B4J237 #=GS A0A0B4J237/19-113 OS Homo sapiens #=GS A0A0B4J237/19-113 DE T cell receptor alpha variable 8-2 #=GS A0A0B4J237/19-113 DR GENE3D; e933f726b4f7f5049e16d302c51c8109/19-113; #=GS A0A0B4J237/19-113 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; #=GS G1RWY5/18-114 AC G1RWY5 #=GS G1RWY5/18-114 OS Nomascus leucogenys #=GS G1RWY5/18-114 DE Uncharacterized protein #=GS G1RWY5/18-114 DR GENE3D; 96718e43612033c2b6d48962ed47e825/18-114; #=GS G1RWY5/18-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; #=GF TC 211.5 1.7E-67 #=GF SQ 6 1fytD01/1-114 ---QSVTQLGSHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVSE--SPFGNEKLTFGTGTRLTIIP 1j8hD01/1-114 ---QSVTQLGSHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVSE--SPFGNEKLTFGTGTRLTIIP P01737/18-135 TRAQSVTQLGSHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVSDLEPNSSASKIIFGSGTRLSI-R A0A0B4J246/18-113 TRAQSVTQLGSHVSVSEGALVLLRCNYSSSVPPYLFWYVQYPNQGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAHMSDAAEYFCAVS----------------------- A0A0B4J237/19-113 -RAQSVTQLDSHVSVSEGTPVLLRCNYSSSYSPSLFWYVQHPNKGLQLLLKYTSAATLVKGINGFEAEFKKSETSFHLTKPSAHMSDAAEYFCVVS----------------------- G1RWY5/18-114 TRAQSVTQLDSHVSVSEGTLVLLRCNYSSSVSPNLFWYVQYPNQGLQLLLKYISGTTLVKGINGFEAEFKKSETSFHLTKPSAHVSDAAEYFCAVSD---------------------- #=GC scorecons 13399999969999999966999999999966959999997997999999997977999999999999999999999999999979999999979920010010011111111111100 #=GC scorecons_70 ___******_********************__*_**************************************************************_______________________ #=GC scorecons_80 ___******_********__**********__*_******************_*_**************************************_**_______________________ #=GC scorecons_90 ___******_********__**********__*_******_**_********_*__****************************_********_**_______________________ //