# STOCKHOLM 1.0
#=GF ID 2.60.40.10/FF/137802
#=GF DE Junctional adhesion molecule A
#=GF AC 2.60.40.10/FF/137802
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 48.109
#=GS Q9Y624/25-128      AC Q9Y624
#=GS Q9Y624/25-128      OS Homo sapiens
#=GS Q9Y624/25-128      DE Junctional adhesion molecule A
#=GS Q9Y624/25-128      DR GENE3D; cfb0ab289b11be53f4ce77419aea7fe5/25-128; 
#=GS Q9Y624/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q9Y624/25-128      DR GO; GO:0005515; GO:0005886; GO:0005911; GO:0005923; GO:0006954; GO:0007179; GO:0030054; GO:0030165; GO:0030198; GO:0031032; GO:0034260; GO:0043547; GO:0045296; GO:0050892; GO:0050900; GO:0070062; GO:0070830; GO:0090002; GO:0090557; GO:0090559; GO:2000249; 
#=GS Q6FIB4/25-128      AC Q6FIB4
#=GS Q6FIB4/25-128      OS Homo sapiens
#=GS Q6FIB4/25-128      DE F11 receptor
#=GS Q6FIB4/25-128      DR GENE3D; cfb0ab289b11be53f4ce77419aea7fe5/25-128; 
#=GS Q6FIB4/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q2WGK2/27-128      AC Q2WGK2
#=GS Q2WGK2/27-128      OS Felis catus
#=GS Q2WGK2/27-128      DE Junctional adhesion molecule A
#=GS Q2WGK2/27-128      DR GENE3D; cf84237ef7fb0b234459d0fa64c6c1c1/27-128; 
#=GS Q2WGK2/27-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis; Felis catus; 
#=GS F6WSS8/25-128      AC F6WSS8
#=GS F6WSS8/25-128      OS Macaca mulatta
#=GS F6WSS8/25-128      DE Junctional adhesion molecule A
#=GS F6WSS8/25-128      DR GENE3D; 95471f1b12310598c5b1bd6fac75c19b/25-128; 
#=GS F6WSS8/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GS I7GN79/25-128      AC I7GN79
#=GS I7GN79/25-128      OS Macaca fascicularis
#=GS I7GN79/25-128      DE Macaca fascicularis brain cDNA clone: QflA-19805, similar to human F11 receptor (F11R), transcript variant 2, mRNA, RefSeq: NM_144501.1
#=GS I7GN79/25-128      DR GENE3D; 95471f1b12310598c5b1bd6fac75c19b/25-128; 
#=GS I7GN79/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS F1PP71/32-133      AC F1PP71
#=GS F1PP71/32-133      OS Canis lupus familiaris
#=GS F1PP71/32-133      DE Uncharacterized protein
#=GS F1PP71/32-133      DR GENE3D; dd306d798a7a61c3de07e5536d2af708/32-133; 
#=GS F1PP71/32-133      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis; Canis lupus; Canis lupus familiaris; 
#=GS G3QCY1/25-128      AC G3QCY1
#=GS G3QCY1/25-128      OS Gorilla gorilla gorilla
#=GS G3QCY1/25-128      DE Uncharacterized protein
#=GS G3QCY1/25-128      DR GENE3D; b26ce3bcfa02e75aedf5acc487228dce/25-128; 
#=GS G3QCY1/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS B2ZI35/27-128      AC B2ZI35
#=GS B2ZI35/27-128      OS Sus scrofa
#=GS B2ZI35/27-128      DE F11 receptor
#=GS B2ZI35/27-128      DR GENE3D; 2b463eec07f45a7f9c25712248e57aad/27-128; 
#=GS B2ZI35/27-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Suina; Suidae; Sus; Sus scrofa; 
#=GS H2N531/25-128      AC H2N531
#=GS H2N531/25-128      OS Pongo abelii
#=GS H2N531/25-128      DE Uncharacterized protein
#=GS H2N531/25-128      DR GENE3D; 8ed2aabeca4abc4a561a9acb47276009/25-128; 
#=GS H2N531/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS G1RUH7/25-128      AC G1RUH7
#=GS G1RUH7/25-128      OS Nomascus leucogenys
#=GS G1RUH7/25-128      DE Uncharacterized protein
#=GS G1RUH7/25-128      DR GENE3D; 3dd3b9d7ad09de48c709aafc460c5d32/25-128; 
#=GS G1RUH7/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS M1EPZ5/4-105       AC M1EPZ5
#=GS M1EPZ5/4-105       OS Mustela putorius furo
#=GS M1EPZ5/4-105       DE F11 receptor
#=GS M1EPZ5/4-105       DR GENE3D; fe23c5c946e79be5cfbf79581a4da89d/4-105; 
#=GS M1EPZ5/4-105       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Mustelidae; Mustelinae; Mustela; Mustela putorius; Mustela putorius furo; 
#=GS K9IIC5/27-128      AC K9IIC5
#=GS K9IIC5/27-128      OS Desmodus rotundus
#=GS K9IIC5/27-128      DE Putative junctional adhesion molecule a
#=GS K9IIC5/27-128      DR GENE3D; 6b05f9a5b6882f25a655567bc59c9517/27-128; 
#=GS K9IIC5/27-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Chiroptera; Microchiroptera; Phyllostomidae; Desmodontinae; Desmodus; Desmodus rotundus; 
#=GS D2I0U3/29-130      AC D2I0U3
#=GS D2I0U3/29-130      OS Ailuropoda melanoleuca
#=GS D2I0U3/29-130      DE Putative uncharacterized protein
#=GS D2I0U3/29-130      DR GENE3D; d784dae518fbbe5959167cf92310eb58/29-130; 
#=GS D2I0U3/29-130      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda; Ailuropoda melanoleuca; 
#=GS G1MAY3/30-131      AC G1MAY3
#=GS G1MAY3/30-131      OS Ailuropoda melanoleuca
#=GS G1MAY3/30-131      DE Uncharacterized protein
#=GS G1MAY3/30-131      DR GENE3D; 1f01f091402c8d6f99228cbf1a5d4a34/30-131; 
#=GS G1MAY3/30-131      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda; Ailuropoda melanoleuca; 
#=GS A0A096N4D8/25-128  AC A0A096N4D8
#=GS A0A096N4D8/25-128  OS Papio anubis
#=GS A0A096N4D8/25-128  DE Uncharacterized protein
#=GS A0A096N4D8/25-128  DR GENE3D; b5592ba3f0c6c0dcfa8cb551f4173ffd/25-128; 
#=GS A0A096N4D8/25-128  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS G3SFP1/24-127      AC G3SFP1
#=GS G3SFP1/24-127      OS Gorilla gorilla gorilla
#=GS G3SFP1/24-127      DE Uncharacterized protein
#=GS G3SFP1/24-127      DR GENE3D; 37fe61addd25c9e7468eb9a8a9f6f481/24-127; 
#=GS G3SFP1/24-127      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS F7B6C3/27-128      AC F7B6C3
#=GS F7B6C3/27-128      OS Equus caballus
#=GS F7B6C3/27-128      DE Uncharacterized protein
#=GS F7B6C3/27-128      DR GENE3D; b56453da6d6f8a9006f7d0cfb1bdf22b/27-128; 
#=GS F7B6C3/27-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Perissodactyla; Equidae; Equus; Equus; Equus caballus; 
#=GS G7NX93/25-128      AC G7NX93
#=GS G7NX93/25-128      OS Macaca fascicularis
#=GS G7NX93/25-128      DE Putative uncharacterized protein
#=GS G7NX93/25-128      DR GENE3D; 96f1d806e59265b6414c3835d1d0be94/25-128; 
#=GS G7NX93/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS W5PHN9/27-128      AC W5PHN9
#=GS W5PHN9/27-128      OS Ovis aries
#=GS W5PHN9/27-128      DE Uncharacterized protein
#=GS W5PHN9/27-128      DR GENE3D; 3bd976464f88add172d6fd7031176761/27-128; 
#=GS W5PHN9/27-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Caprinae; Ovis; Ovis aries; 
#=GS H2Q0F4/25-128      AC H2Q0F4
#=GS H2Q0F4/25-128      OS Pan troglodytes
#=GS H2Q0F4/25-128      DE F11 receptor
#=GS H2Q0F4/25-128      DR GENE3D; cfb0ab289b11be53f4ce77419aea7fe5/25-128; 
#=GS H2Q0F4/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS M3Z9D2/25-128      AC M3Z9D2
#=GS M3Z9D2/25-128      OS Nomascus leucogenys
#=GS M3Z9D2/25-128      DE Uncharacterized protein
#=GS M3Z9D2/25-128      DR GENE3D; b22070e1108384650ecac0cee555d7fd/25-128; 
#=GS M3Z9D2/25-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS Q9XT56/27-128      AC Q9XT56
#=GS Q9XT56/27-128      OS Bos taurus
#=GS Q9XT56/27-128      DE Junctional adhesion molecule A
#=GS Q9XT56/27-128      DR GENE3D; f32d4f6d0751f51ae15471b6add7b38f/27-128; 
#=GS Q9XT56/27-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos taurus; 
#=GS L8HQA4/27-128      AC L8HQA4
#=GS L8HQA4/27-128      OS Bos mutus
#=GS L8HQA4/27-128      DE Junctional adhesion molecule A
#=GS L8HQA4/27-128      DR GENE3D; f32d4f6d0751f51ae15471b6add7b38f/27-128; 
#=GS L8HQA4/27-128      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Laurasiatheria; Ruminantia; Pecora; Bovidae; Bovinae; Bos; Bos mutus; 
#=GS A0A0D9S3I8/25-128  AC A0A0D9S3I8
#=GS A0A0D9S3I8/25-128  OS Chlorocebus sabaeus
#=GS A0A0D9S3I8/25-128  DE Uncharacterized protein
#=GS A0A0D9S3I8/25-128  DR GENE3D; 8f2a2aafed7dc1d4ed9de25c3be80fec/25-128; 
#=GS A0A0D9S3I8/25-128  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GF TC 207.9 2.0E-65
#=GF SQ 24
Q9Y624/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
Q6FIB4/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
Q2WGK2/27-128              ---RGAVYTSEPDVRVPEDKPAKLSCSYSGFSNPRVEWKFAHGDITSLVCYKNKITASYADRVTFSHSGITFHSVTRKDTGTYTCMVSDDGGNTYGEVSVQLTVL
F6WSS8/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTKLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNNYGEVKVKLIV-
I7GN79/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTKLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNNYGEVKVKLIV-
F1PP71/32-133              ---RGAVYTSEPEVRVAENKPAKLSCSYSGFSSPRVEWKFAQGDITSLVCYNNKITASYEDRVTFSHSGITFHSVTRKDTGMYTCMVSDEGGNTYGEVTVKLIVL
G3QCY1/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
B2ZI35/27-128              ---RGAVYTSEPEVRVAENKPAKLSCSYSGFSSPRVEWKFTHGDITSLVCYNNKITASYENRVTFSASGITFHSVTRKDTGTYTCMVSDEGGNTYGEVTVNLIVL
H2N531/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
G1RUH7/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
M1EPZ5/4-105               ---RGAVYTSDREVSVAENKPAKLSCSYSGFSSPRVEWKFAQGDITSLVCYNNKITASYEDRVTFSHSGITFHSVTRKDTGTYTCMVSDEGGNTYGEVTVKLVVL
K9IIC5/27-128              ---RGAVYTSESDVRVPENKPAKLSCSYSGFSSPRVEWKFAQGDITSLVCYNNKITAPYEDRVTFSNTGITFHSVTRKDTGTYTCMVSDEGGTAYGEVSVQLTVL
D2I0U3/29-130              ---RGAVYTLEPEVRVAENKPAKLSCSYSGFSSPRVEWKFAQGDVTSLVCYNNKITAFYEDRVTFSHSGITFHSVTRKDTGMYTCMVSDDGGNTYGEVTVKLIVL
G1MAY3/30-131              ---RGAVYTLEPEVRVAENKPAKLSCSYSGFSSPRVEWKFAQGDVTSLVCYNNKITAFYEDRVTFSHSGITFHSVTRKDTGMYTCMVSDDGGNTYGEVTVKLIVL
A0A096N4D8/25-128          ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTKLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNNYAEVKVKLIV-
G3SFP1/24-127              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
F7B6C3/27-128              ---KGTVYTSEPVVRVAENKPAKLSCTYSGFNSPRVEWKFAQGDTTSLVCYNNKITASYEDRVTFSPSGITFHSVTRKDTGTYTCMVSDDGGNTYGEVSIELIVL
G7NX93/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTKLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNNYGEVKVKLIV-
W5PHN9/27-128              ---RGAVQTYEPVVKVPENNPAKLSCSYSGFSSPRVEWKFTHGDIRGLVCYNNKITASYENRVTFSNSGITFHSVTRKDTGMYTCMVSDEGGNTYGEVTVQLIVL
H2Q0F4/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
M3Z9D2/25-128              ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIV-
Q9XT56/27-128              ---RGAVQTYEPVVRVPENNPAKLSCSYSGFSSPRVEWKFTHGDIRGLVCYNNKITASYENRVTFSDTGITFHSVTRKDTGMYTCMVSDEGGNTYGEVTVQLIVL
L8HQA4/27-128              ---RGAVQTYEPVVRVPENNPAKLSCSYSGFSSPRVEWKFTHGDIRGLVCYNNKITASYENRVTFSDTGITFHSVTRKDTGMYTCMVSDEGGNTYGEVTVQLIVL
A0A0D9S3I8/25-128          ALGSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTKLVCYNNKITASYEDRVTFLPSGITFKSVTREDTGTYTCMVSEEGGNNYGEVKVKLIV-
#=GC scorecons             111556966687597769869699995999988999999947995749999899999798799995469999699996999699999977998598994869792
#=GC scorecons_70          _____**___**_********_****_*************_***_*_******************__*****_****_***************_****_*_***_
#=GC scorecons_80          ______*___**_**__**_*_****_*************_***___**********_*******___****_****_***_******_****_****_*_***_
#=GC scorecons_90          ______*___*__*___**_*_****_*************__**___**********_**_****___****_****_***_******__***_****_*_*_*_
//