# STOCKHOLM 1.0
#=GF ID 2.60.200.20/FF/8268
#=GF DE DNA repair protein XRS2
#=GF AC 2.60.200.20/FF/8268
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 89.528
#=GS 3hueA01/1-115     AC O43070
#=GS 3hueA01/1-115     OS Schizosaccharomyces pombe 972h-
#=GS 3hueA01/1-115     DE DNA repair and telomere maintenance protein nbs1
#=GS 3hueA01/1-115     DR CATH; 3hue; A:2-115; 
#=GS 3hueA01/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS 3hueA01/1-115     DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS 3hufA01/1-116     AC O43070
#=GS 3hufA01/1-116     OS Schizosaccharomyces pombe 972h-
#=GS 3hufA01/1-116     DE DNA repair and telomere maintenance protein nbs1
#=GS 3hufA01/1-116     DR CATH; 3huf; A:1-116; 
#=GS 3hufA01/1-116     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS 3hufA01/1-116     DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS 3hufB01/1-116     AC O43070
#=GS 3hufB01/1-116     OS Schizosaccharomyces pombe 972h-
#=GS 3hufB01/1-116     DE DNA repair and telomere maintenance protein nbs1
#=GS 3hufB01/1-116     DR CATH; 3huf; B:1-116; 
#=GS 3hufB01/1-116     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS 3hufB01/1-116     DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS 3hufC01/1-116     AC O43070
#=GS 3hufC01/1-116     OS Schizosaccharomyces pombe 972h-
#=GS 3hufC01/1-116     DE DNA repair and telomere maintenance protein nbs1
#=GS 3hufC01/1-116     DR CATH; 3huf; C:1-116; 
#=GS 3hufC01/1-116     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS 3hufC01/1-116     DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS 3i0mA01/1-115     AC O43070
#=GS 3i0mA01/1-115     OS Schizosaccharomyces pombe 972h-
#=GS 3i0mA01/1-115     DE DNA repair and telomere maintenance protein nbs1
#=GS 3i0mA01/1-115     DR CATH; 3i0m; A:2-115; 
#=GS 3i0mA01/1-115     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS 3i0mA01/1-115     DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS 3i0nA01/1-116     AC O43070
#=GS 3i0nA01/1-116     OS Schizosaccharomyces pombe 972h-
#=GS 3i0nA01/1-116     DE DNA repair and telomere maintenance protein nbs1
#=GS 3i0nA01/1-116     DR CATH; 3i0n; A:1-116; 
#=GS 3i0nA01/1-116     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS 3i0nA01/1-116     DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS 3i0nB01/1-116     AC O43070
#=GS 3i0nB01/1-116     OS Schizosaccharomyces pombe 972h-
#=GS 3i0nB01/1-116     DE DNA repair and telomere maintenance protein nbs1
#=GS 3i0nB01/1-116     DR CATH; 3i0n; B:1-116; 
#=GS 3i0nB01/1-116     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS 3i0nB01/1-116     DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS P33301/1-117      AC P33301
#=GS P33301/1-117      OS Saccharomyces cerevisiae S288C
#=GS P33301/1-117      DE DNA repair protein XRS2
#=GS P33301/1-117      DR GENE3D; 73e805cf0a2dfaeb03b035e0a09bcc60/1-117; 
#=GS P33301/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P33301/1-117      DR GO; GO:0000723; GO:0003677; GO:0003691; GO:0005515; GO:0005634; GO:0005654; GO:0006284; GO:0006303; GO:0030435; GO:0030674; GO:0030870; GO:0035753; GO:0042138; GO:0042162; GO:0043047; GO:0051880; GO:0097552; 
#=GS O43070/1-116      AC O43070
#=GS O43070/1-116      OS Schizosaccharomyces pombe 972h-
#=GS O43070/1-116      DE DNA repair and telomere maintenance protein nbs1
#=GS O43070/1-116      DR GENE3D; 23aa52860a709f3e42843f5e4e202a49/1-116; 
#=GS O43070/1-116      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe; 
#=GS O43070/1-116      DR GO; GO:0000722; GO:0000723; GO:0000784; GO:0005515; GO:0005634; GO:0006281; GO:0006302; GO:0030870; GO:0031573; GO:0042138; 
#=GS Q5AVW7/79-198     AC Q5AVW7
#=GS Q5AVW7/79-198     OS Aspergillus nidulans FGSC A4
#=GS Q5AVW7/79-198     DE Protein kinase (Eurofung)
#=GS Q5AVW7/79-198     DR GENE3D; 41945bc8e12bf40075d6808ecd2956cf/79-198; 
#=GS Q5AVW7/79-198     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus nidulans; 
#=GS Q5AVW7/79-198     DR GO; GO:0005634; GO:0006974; 
#=GS B3LFT4/1-117      AC B3LFT4
#=GS B3LFT4/1-117      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LFT4/1-117      DE DNA repair protein XRS2
#=GS B3LFT4/1-117      DR GENE3D; 1a30045ac24eb5c27198895502aaae28/1-117; 
#=GS B3LFT4/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS C8Z5T0/1-117      AC C8Z5T0
#=GS C8Z5T0/1-117      OS Saccharomyces cerevisiae EC1118
#=GS C8Z5T0/1-117      DE Xrs2p
#=GS C8Z5T0/1-117      DR GENE3D; 326b7d71385fdc6c3950cb1d4af4f0a8/1-117; 
#=GS C8Z5T0/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS E7KM25/1-117      AC E7KM25
#=GS E7KM25/1-117      OS Saccharomyces cerevisiae Lalvin QA23
#=GS E7KM25/1-117      DE Xrs2p
#=GS E7KM25/1-117      DR GENE3D; 38fb11c1529fc55c24f18183d63f4ab2/1-117; 
#=GS E7KM25/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WBA5/1-117      AC G2WBA5
#=GS G2WBA5/1-117      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WBA5/1-117      DE K7_Xrs2p
#=GS G2WBA5/1-117      DR GENE3D; 5ee2f29d9c2ba778c72824a425c260f4/1-117; 
#=GS G2WBA5/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0SQ64/1-119      AC A0SQ64
#=GS A0SQ64/1-119      OS Saccharomyces cariocanus
#=GS A0SQ64/1-119      DE XRS2
#=GS A0SQ64/1-119      DR GENE3D; 7bd8780ebbafc71733247646f50a043e/1-119; 
#=GS A0SQ64/1-119      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cariocanus; 
#=GS A6ZYW7/1-117      AC A6ZYW7
#=GS A6ZYW7/1-117      OS Saccharomyces cerevisiae YJM789
#=GS A6ZYW7/1-117      DE DNA repair protein
#=GS A6ZYW7/1-117      DR GENE3D; 82a5ad218f45f380575a9c2ce5dc41c4/1-117; 
#=GS A6ZYW7/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS B5VGP9/1-117      AC B5VGP9
#=GS B5VGP9/1-117      OS Saccharomyces cerevisiae AWRI1631
#=GS B5VGP9/1-117      DE YDR369Cp-like protein
#=GS B5VGP9/1-117      DR GENE3D; a3489859956f4e71e6153eaec8d8bfff/1-117; 
#=GS B5VGP9/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0A0L8VUB5/1-117  AC A0A0L8VUB5
#=GS A0A0L8VUB5/1-117  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VUB5/1-117  DE XRS2p Protein required for DNA repair
#=GS A0A0L8VUB5/1-117  DR GENE3D; a3489859956f4e71e6153eaec8d8bfff/1-117; 
#=GS A0A0L8VUB5/1-117  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS N1P7A2/1-117      AC N1P7A2
#=GS N1P7A2/1-117      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P7A2/1-117      DE Xrs2p
#=GS N1P7A2/1-117      DR GENE3D; e6940b38017ad5f1207206f859882413/1-117; 
#=GS N1P7A2/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS J4TZ84/1-118      AC J4TZ84
#=GS J4TZ84/1-118      OS Saccharomyces kudriavzevii IFO 1802
#=GS J4TZ84/1-118      DE XRS2-like protein
#=GS J4TZ84/1-118      DR GENE3D; eef6b647f8ceff0ffe372b2d4689ed7b/1-118; 
#=GS J4TZ84/1-118      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces kudriavzevii; 
#=GS E7QDB0/1-117      AC E7QDB0
#=GS E7QDB0/1-117      OS Saccharomyces cerevisiae VL3
#=GS E7QDB0/1-117      DE Xrs2p
#=GS E7QDB0/1-117      DR GENE3D; f11001d477ede7d2be02d7ae72e8cce2/1-117; 
#=GS E7QDB0/1-117      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GF TC 138.3 1.0E-43
#=GF SQ 21
3hueA01/1-115             XWIIEAEGDILKGKSRIL-----FPGTYIVGRNVSDDSSHIQVI--SKSISKRHARFTIL-TPS---EKDYFTGGP----CEF---EVKDLDTKFGTKVNEKVVGQNGDS-YKEKDLKIQLGKCPFTINAYWRS-----
3hufA01/1-116             MWIIEAEGDILKGKSRIL-----FPGTYIVGRNVSDDSSHIQVI--SKSISKRHARFTIL-TPS---EKDYFTGGP----CEF---EVKDLDTKFGTKVNEKVVGQNGDS-YKEKDLKIQLGKCPFTINAYWRSM----
3hufB01/1-116             MWIIEAEGDILKGKSRIL-----FPGTYIVGRNVSDDSSHIQVI--SKSISKRHARFTIL-TPS---EKDYFTGGP----CEF---EVKDLDTKFGTKVNEKVVGQNGDS-YKEKDLKIQLGKCPFTINAYWRSM----
3hufC01/1-116             MWIIEAEGDILKGKSRIL-----FPGTYIVGRNVSDDSSHIQVI--SKSISKRHARFTIL-TPS---EKDYFTGGP----CEF---EVKDLDTKFGTKVNEKVVGQNGDS-YKEKDLKIQLGKCPFTINAYWRSM----
3i0mA01/1-115             XWIIEAEGDILKGKSRIL-----FPGTYIVGRNVSDDSSHIQVI--SKSISKRHARFTIL-TPS---EKDYFTGGP----CEF---EVKDLDTKFGTKVNEKVVGQNGDS-YKEKDLKIQLGKCPFTINAYWRS-----
3i0nA01/1-116             MWIIEAEGDILXGXSRIL-----FPGTYIVGRNVSDDSSHIQVI--SXSISXRHARFTIL-TPS---EXDYFTGGP----CEF---EVXDLDTXFGTXVNEXVVGQNGDS-YXEXDLXIQLGXCPFTINAYWRSM----
3i0nB01/1-116             MWIIEAEGDILXGXSRIL-----FPGTYIVGRNVSDDSSHIQVI--SXSISXRHARFTIL-TPS---EXDYFTGGP----CEF---EVXDLDTXFGTXVNEXVVGQNGDS-YXEXDLXIQLGXCPFTINAYWRSM----
P33301/1-117              MWVVRYQNTLEDGSISFISCCLQAFKTYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
O43070/1-116              MWIIEAEGDILKGKSRIL-----FPGTYIVGRNVSDDSSHIQVI--SKSISKRHARFTIL-TPS---EKDYFTGGP----CEF---EVKDLDTKFGTKVNEKVVGQNGDS-YKEKDLKIQLGKCPFTINAYWRSM----
Q5AVW7/79-198             ---------------RLSSNVMDPSRGFSFGRTIGRSDILLCADNGSKRISNTHFRIYIT-TDSILMLEDVSTNGTIVDNCRL---KKRDRENSRMLTNGSVISVVNGDYATNEVKFVVRLPNREGFTDLYAKNLQNYL
B3LFT4/1-117              MWVVRYQNTLEDGSISFISCCLQAFKTYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
C8Z5T0/1-117              MWVVRYQNTLEDGSISFISCCLQAFKTYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
E7KM25/1-117              MWVVRYQNTLEDGSISFISCCLQAFKTYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
G2WBA5/1-117              MWVVRYQNTLEDGSISFISCCLQAFKSYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
A0SQ64/1-119              MWVVRYQNTLEDGSISFISCCLQAFKSYSIGR--SSKNPLLIKN--DKSISRQHITFKWQYMND---SSDLKYNSL----CLINQGKLTSINKKF-MKVGETFTINASEV---LNSTVIELGTTPIRIEIEWIN-----
A6ZYW7/1-117              MWVVRYQNTLEDGSISFISCCLQAFKSYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
B5VGP9/1-117              MWVVRYQNTLEDGSISFISCCLQAFKTYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
A0A0L8VUB5/1-117          MWVVRYQNTLEDGSISFISCCLQAFKTYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
N1P7A2/1-117              MWVVRYQNTLEDGSISFISCCLQAFKTYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
J4TZ84/1-118              MWVIRYQNTVEDGHISHISCCLQASKSYSIGR--SSKNSLIIKN--DKSISRQHITFKWE-ING---GLNLKASHL----SLINQGKLTSINKKF-LKVGEKFIIYAPEV---SNLTTIELGTSPFHIEVAWVS-----
E7QDB0/1-117              MWVVRYQNTLEDGSISFISCCLQAFKSYSIGR--SSKNPLIIKN--DKSISRQHITFKWE-INN---SSDLKHSSL----CLVNKGKLTSLNKKF-MKVGETFTINASDV---LKSTIIELGTTPIRIEFEWI------
#=GC scorecons            5755445445337345552222244568569912855555744400567994595574440555000438535555000084511165456655715575735544558401145453859744744854474210000
#=GC scorecons_70         _*__________*_____________**_***__*_____*______****__*__*____________*__________*_________*___*___*_*_______*_________*_**__*__*___*_______
#=GC scorecons_80         _*__________*______________*__**__*_____*_______***__*__*____________*__________*_____________*___*_*_______*_________*_**__*__*___*_______
#=GC scorecons_90         ___________________________*__**_________________**__*_______________*__________*___________________________*_________*_*__________________
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