# STOCKHOLM 1.0
#=GF ID 2.60.175.20/FF/158
#=GF DE Major capsid protein L1
#=GF AC 2.60.175.20/FF/158
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 45.720
#=GS Q8JJF6/25-430      AC Q8JJF6
#=GS Q8JJF6/25-430      OS Psittacus erithacus timneh papillomavirus (isolate African grey parrot)
#=GS Q8JJF6/25-430      DE Major capsid protein L1
#=GS Q8JJF6/25-430      DR GENE3D; 1072c74c9fb99f376af3646455e8d778/25-430; 
#=GS Q8JJF6/25-430      DR ORG; Viruses; Papillomaviridae; Thetapapillomavirus; Thetapapillomavirus 1; 
#=GS F8WJW3/25-430      AC F8WJW3
#=GS F8WJW3/25-430      OS Thetapapillomavirus 1
#=GS F8WJW3/25-430      DE Major capsid protein L1
#=GS F8WJW3/25-430      DR GENE3D; 1072c74c9fb99f376af3646455e8d778/25-430; 
#=GS F8WJW3/25-430      DR ORG; Viruses; Papillomaviridae; Thetapapillomavirus; Thetapapillomavirus 1; 
#=GS A0A193CKH7/20-418  AC A0A193CKH7
#=GS A0A193CKH7/20-418  OS Duck papillomavirus
#=GS A0A193CKH7/20-418  DE Major capsid protein L1
#=GS A0A193CKH7/20-418  DR GENE3D; 5e4005652fe8cc95113157d7bd777a83/20-418; 
#=GS A0A193CKH7/20-418  DR ORG; Viruses; Papillomaviridae; Duck papillomavirus; 
#=GS A0A193DR34/17-433  AC A0A193DR34
#=GS A0A193DR34/17-433  OS Etapapillomavirus 1
#=GS A0A193DR34/17-433  DE Major capsid protein L1
#=GS A0A193DR34/17-433  DR GENE3D; 6bfee7e7c0be0e0420ba575fef742231/17-433; 
#=GS A0A193DR34/17-433  DR ORG; Viruses; Papillomaviridae; Etapapillomavirus; Etapapillomavirus 1; 
#=GS Q8JNA2/17-433      AC Q8JNA2
#=GS Q8JNA2/17-433      OS Fringilla coelebs papillomavirus (Dutch isolate)
#=GS Q8JNA2/17-433      DE Major capsid protein L1
#=GS Q8JNA2/17-433      DR GENE3D; 6bfee7e7c0be0e0420ba575fef742231/17-433; 
#=GS Q8JNA2/17-433      DR ORG; Viruses; Papillomaviridae; Etapapillomavirus; Etapapillomavirus 1; 
#=GF TC 855.9 5.5E-262
#=GF SQ 5
Q8JJF6/25-430              PLFTTDDFVSPTDYVYHVNTGRLLMVGNPYFSVPDADKD-RAAVPKVSGNQYRVFRLKLPDPNDQFDLPDG-LFDPEKFRYVWQLVGLEVCRGQPLGVGISAAPAFNKGRDVESPARLVADDATREDDNRVSVGLDPKQNQMLIVGCAPAYGQHWGKATPCPDDTLDTQCPPIELISSTLQDGDMCDIGFGCMDFAALAANTSDIPLELINTVSKYPDWIRMHNDPKGDCCFFLMRREQLYARHMWQHSGGIGEAIP-SVYLNT-SFTSTNNCAYMCVPSGSVYTSDTQLFNRPYWLSKAQGPNNGVCWGDDLFITVLDNTRGGVMNISTKPTDS----GDVYKPSDFREYVRHVEEYELSCVLRLCKVPLSPDVLASLYRAVPHVLGRWGISEYPQADTTPEDKYRYISSQA------T
F8WJW3/25-430              PLFTTDDFVSPTDYVYHVNTGRLLMVGNPYFSVPDADKD-RAAVPKVSGNQYRVFRLKLPDPNDQFDLPDG-LFDPEKFRYVWQLVGLEVCRGQPLGVGISAAPAFNKGRDVESPARLVADDATREDDNRVSVGLDPKQNQMLIVGCAPAYGQHWGKATPCPDDTLDTQCPPIELISSTLQDGDMCDIGFGCMDFAALAANTSDIPLELINTVSKYPDWIRMHNDPKGDCCFFLMRREQLYARHMWQHSGGIGEAIP-SVYLNT-SFTSTNNCAYMCVPSGSVYTSDTQLFNRPYWLSKAQGPNNGVCWGDDLFITVLDNTRGGVMNISTKPTDS----GDVYKPSDFREYVRHVEEYELSCVLRLCKVPLSPDVLASLYRAVPHVLGRWGISEYPQADTTPEDKYRYISSQA------T
A0A193CKH7/20-418          SLYSTDEYVETTEYVYHLRTDRLLTVGNPYFEVKDEDHPGQAAVPKVSANQYRVFRLRLPDPNGKFPLPEGKVNDPDRYRLVWQVVGLEVNRGQPLGVGLSAAPLFNRGRDVENPNARTQPEGG-EPDNRVNVAVDPKQNQMLIVGCAPATGQHWQAAKPCEHDTLDTKCPPIELVNSVIEDGDMSDIGFGPMDFRSLGINRSDVPLELVSSVAKYPDWIKMHTDTFGDTCFYFVRREQVYARRLWQHSGSPGEPIPKDIYVGP-ELASSNNVSYVTVPSGSVVTSDTQLFNRPYWLSQAQGHNNGVCWGEDLFVTVLDNTRNIILNISTLKDDADPHHATQYKKLNYNEYVRHVEEFEITAILRLCRVPLQPEILAHIYRMSPRILDRWGISEAPQPNT-------------------R
A0A193DR34/17-433          P-YSTDDYVTPTEHLYHLQTDRLITVGNPYFQIADADHPGVIAVPKVSANQYRCFRLQLPDPNGPFPLPSNNLYDPEKHRLVWQLVGLEIDRGQPLGVGLVAAPAFNRGRDAEANSRAAWADP--EGDNRISCAFEPKHNQMLIVGCAPAVGQHWGLGTKCPNETPDTKCPPIELVNSNIQDGDMSDIGFGAMDFNALGLNRSDVPMELAASVAKYPDWIKMHTDAHGDSCFYYVTREQIYARRYWQQSGVPGEPVPETVPIASREQIEKNNSAYMACPSGSVITSDTNLFNRPYWLSRAQGTNNGILWNENLFVTVLDNSRNVIMKISSLAEGAQENNATVYDWKNYYECVRHVEEYGISAIVRLCRVTLTAENLGSIYRMNPDILKKWGIQEAPLGPQSAEDKYRFTSSQAITCQLPQ
Q8JNA2/17-433              P-YSTDDYVTPTEHLYHLQTDRLITVGNPYFQIADADHPGVIAVPKVSANQYRCFRLQLPDPNGPFPLPSNNLYDPEKHRLVWQLVGLEIDRGQPLGVGLVAAPAFNRGRDAEANSRAAWADP--EGDNRISCAFEPKHNQMLIVGCAPAVGQHWGLGTKCPNETPDTKCPPIELVNSNIQDGDMSDIGFGAMDFNALGLNRSDVPMELAASVAKYPDWIKMHTDAHGDSCFYYVTREQIYARRYWQQSGVPGEPVPETVPIASREQIEKNNSAYMACPSGSVITSDTNLFNRPYWLSRAQGTNNGILWNENLFVTVLDNSRNVIMKISSLAEGAQENNATVYDWKNYYECVRHVEEYGISAIVRLCRVTLTAENLGSIYRMNPDILKKWGIQEAPLGPQSAEDKYRFTSSQAITCQLPQ
#=GC scorecons             627599779469666996495996599999946395954235999999599994999599999549499451649977595999699996399999999659995996999594545342374109399966454699699999999999399995355495469599699999965946699995999993999369549599696994459599999969959439949974659995999639969934995691474544053453993696449999939999599999999959994999649566996999995953675995434551111555952367396999999756656699969594563955699539469469995949443522444443244440000004
#=GC scorecons_70          *_*_*****_****_**__*_**__******_*_*_*_____******_****_***_*****__*_**___*_****_*_*********_********__***_******_*________*___*_*****___***************_****_____*__**_**_*******_*__*****_*****_***_**__*_*******___*_*********_*__**_***___***_***__*****__**_**__*__________**_***__*****_****_*********_***_****_*_*_********_*__**_**_____________*____*_*_*******__*_*_*****_*__*_*___**__*_**_****_*_*________________________
#=GC scorecons_80          __*_*****__*___**__*_**__******___*_*_____******_****_***_*****__*_**_____****_*_***_****__********__***_**_***_*________*___*_***______**_***********_****_____*___*_**_******__*___****_*****_***__*__*_**_*_**___*_******_**_*__**_***___***_***__**_**__**__*__*__________**__*___*****_****_*********_***_***__*___**_*****_*_____**_____________*____*_*_*******______***_*_*____*___**__*__*__***_*_*________________________
#=GC scorecons_90          ____**__*__*___**__*_**__******___*_*_____******_****_***_*****__*_**_____**___*_***_****__********__***_**_***_*____________*_***______**_***********_****_____*___*_**_******__*___****_*****_***__*__*_**_*_**___*_******_**_*__**_**____***_***__**_**__**__*_____________**__*___*****_****_*********_***_***__*___**_*****_*_____**_____________*______*_******_______***_*_*____*___**__*__*__***_*_*________________________
//