# STOCKHOLM 1.0 #=GF ID 2.60.120.20/FF/2621 #=GF DE Genome polyprotein #=GF AC 2.60.120.20/FF/2621 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 33.067 #=GS 1mec200/1-256 AC P12296 #=GS 1mec200/1-256 OS Mengo virus #=GS 1mec200/1-256 DE Genome polyprotein #=GS 1mec200/1-256 DR CATH; 1mec; 2:1-256; #=GS 1mec200/1-256 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS 1mec200/1-256 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS 1mec200/1-256 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS 1tme200/1-267 AC P13899 #=GS 1tme200/1-267 OS Theiler's encephalomyelitis virus (STRAIN DA) #=GS 1tme200/1-267 DE Genome polyprotein #=GS 1tme200/1-267 DR CATH; 1tme; 2:12-266; #=GS 1tme200/1-267 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; #=GS 1tme200/1-267 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS 1tme200/1-267 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS 1tmf200/1-267 AC P08544 #=GS 1tmf200/1-267 OS Theiler's encephalomyelitis virus (STRAIN BEAN 8386) #=GS 1tmf200/1-267 DE Genome polyprotein #=GS 1tmf200/1-267 DR CATH; 1tmf; 2:1-267; #=GS 1tmf200/1-267 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; #=GS 1tmf200/1-267 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS 1tmf200/1-267 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS 2mev200/1-256 AC P12296 #=GS 2mev200/1-256 OS Mengo virus #=GS 2mev200/1-256 DE Genome polyprotein #=GS 2mev200/1-256 DR CATH; 2mev; 2:8-256; #=GS 2mev200/1-256 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS 2mev200/1-256 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS 2mev200/1-256 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P08544/148-414 AC P08544 #=GS P08544/148-414 OS Theiler's encephalomyelitis virus (STRAIN BEAN 8386) #=GS P08544/148-414 DE Genome polyprotein #=GS P08544/148-414 DR GENE3D; 19c5917638f44980bf3ac1dc68cf5a0e/148-414; #=GS P08544/148-414 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; #=GS P08544/148-414 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS P08544/148-414 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P17594/138-393 AC P17594 #=GS P17594/138-393 OS Encephalomyocarditis virus strain emc-d diabetogenic #=GS P17594/138-393 DE Genome polyprotein #=GS P17594/138-393 DR GENE3D; 306ef00413ea35baba28a80edc353cda/138-393; #=GS P17594/138-393 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS P17594/138-393 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS P17594/138-393 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P13899/148-414 AC P13899 #=GS P13899/148-414 OS Theiler's encephalomyelitis virus (STRAIN DA) #=GS P13899/148-414 DE Genome polyprotein #=GS P13899/148-414 DR GENE3D; 9da60b0ab4ecd445290c63cd2f8cb45d/148-414; #=GS P13899/148-414 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; #=GS P13899/148-414 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS P13899/148-414 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P17593/138-393 AC P17593 #=GS P17593/138-393 OS Encephalomyocarditis virus strain emc-b nondiabetogenic #=GS P17593/138-393 DE Genome polyprotein #=GS P17593/138-393 DR GENE3D; b2c88ffa3265e9cfe92e92d1e089995c/138-393; #=GS P17593/138-393 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS P17593/138-393 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS P17593/138-393 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P12296/138-393 AC P12296 #=GS P12296/138-393 OS Mengo virus #=GS P12296/138-393 DE Genome polyprotein #=GS P12296/138-393 DR GENE3D; c64731d0c7e9b46d6785ebc300a32010/138-393; #=GS P12296/138-393 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS P12296/138-393 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS P12296/138-393 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS P08545/148-414 AC P08545 #=GS P08545/148-414 OS Theiler's encephalomyelitis virus (STRAIN GDVII) #=GS P08545/148-414 DE Genome polyprotein #=GS P08545/148-414 DR GENE3D; cc9a64b7827e0566082487b7bff1672b/148-414; #=GS P08545/148-414 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; #=GS P08545/148-414 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS P08545/148-414 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS Q66765/138-393 AC Q66765 #=GS Q66765/138-393 OS Encephalomyocarditis virus strain Rueckert #=GS Q66765/138-393 DE Genome polyprotein #=GS Q66765/138-393 DR GENE3D; f29d5705bbbb852bb9ed3165253bcbb6/138-393; #=GS Q66765/138-393 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS Q66765/138-393 DR GO; GO:0039520; GO:0039522; GO:0039544; #=GS Q66765/138-393 DR EC; 2.7.7.48; 3.4.22.28; 3.6.1.15; #=GS Q1KNJ5/138-393 AC Q1KNJ5 #=GS Q1KNJ5/138-393 OS Encephalomyocarditis virus #=GS Q1KNJ5/138-393 DE Genome polyprotein #=GS Q1KNJ5/138-393 DR GENE3D; 254ee522c72ce2a159e02a44925118cb/138-393; #=GS Q1KNJ5/138-393 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS Q1KNJ5/138-393 DR GO; GO:0039520; #=GS J7K6T6/114-380 AC J7K6T6 #=GS J7K6T6/114-380 OS Theiler's encephalomyelitis virus #=GS J7K6T6/114-380 DE Polyprotein #=GS J7K6T6/114-380 DR GENE3D; 0f557a2dc109dcd2f08f8dadea75de20/114-380; #=GS J7K6T6/114-380 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; #=GS P32540/138-393 AC P32540 #=GS P32540/138-393 OS Mengo encephalomyocarditis virus (strain 37A) #=GS P32540/138-393 DE Genome polyprotein #=GS P32540/138-393 DR GENE3D; c5df6aae9c27ba70329abd2e2dced85b/138-393; #=GS P32540/138-393 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS T1WMM5/138-393 AC T1WMM5 #=GS T1WMM5/138-393 OS Encephalomyocarditis virus #=GS T1WMM5/138-393 DE Genome polyprotein #=GS T1WMM5/138-393 DR GENE3D; e7686b984645fa7d90b9ffb9750b0458/138-393; #=GS T1WMM5/138-393 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus A; #=GS O56165/148-414 AC O56165 #=GS O56165/148-414 OS Theiler's encephalomyelitis virus #=GS O56165/148-414 DE Polyprotein #=GS O56165/148-414 DR GENE3D; f402ca21a9ec8401d352cd47ee4a145d/148-414; #=GS O56165/148-414 DR ORG; Viruses; Picornavirales; Picornaviridae; Cardiovirus; Cardiovirus B; #=GF TC 546.7 4.7E-168 #=GF SQ 16 1mec200/1-256 DQNTEEMENLSDRVSQDTAGNTVTNTQSTVGRLVGYGTVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGATLRRHYLVKTGWRVQVQCNASQFHAGSLLVFMAPEYPT-----------LDVFAMDNRW-SKDNLPNGTRTQTNRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHEVLSRQ 1tme200/1-267 DQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGEAHHGEHPASCADTATDKVLAAERYYTIDLASWTTTQEAFSHIRIPLPHVLAGEDGGVFGATLRRHYLCKTGWRVQVQCNASQFHAGSLLVFMAPEFYTGKGTKTGDMEPTDPFTMDTTWRAPQGAPTGYRYDS-RTGFFAMNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNIAPTSSWTQHANWTLVVAVFSPLQYASGSSSDVQITASIQPVNPVFNGLRHETVIAQ 1tmf200/1-267 DQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGKSHHGEHPASCADTATDKVLAAERYYTIDLASWTTSQEAFSHIRIPLPHVLAGEDGGVFGATLRRHYLCKTGWRVQVQCNASQFHAGSLLVFMAPEFYTGKGTKTGTMEPSDPFTMDTEWRSPQGAPTGYRYDS-RTGFFATNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNVAPSSSWTQHANWTLVVAVLSPLQYATGSSPDVQITASLQPVNPVFNGLRHETVIAQ 2mev200/1-256 DQNTEEMENLSDRVSQDTAGNTVTNTQSTVGRLVGYGTVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGATLRRHYLVKTGWRVQVQCNASQFHAGSLLVFMAPEYPT-----------LDVFAMDNRW-SKDNLPNGTRTQTNRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHEVLSRQ P08544/148-414 DQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGKSHHGEHPASCADTATDKVLAAERYYTIDLASWTTSQEAFSHIRIPLPHVLAGEDGGVFGATLRRHYLCKTGWRVQVQCNASQFHAGSLLVFMAPEFYTGKGTKTGTMEPSDPFTMDTEWRSPQGAPTGYRYDS-RTGFFATNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNVAPSSSWTQHANWTLVVAVLSPLQYATGSSPDVQITASLQPVNPVFNGLRHETVIAQ P17594/138-393 DQNTEEMENLSDRVLQDTAGNTVTNTQSTVGRLVGYGAVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGAALRRHYLVKTGWRVQVQCNASQFHAGSLLVFMAPEYPT-----------LDAFAMDNRW-SKDNLPNGTKTQTNRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHETLSRQ P13899/148-414 DQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGEAHHGEHPASCADTATDKVLAAERYYTIDLASWTTTQEAFSHIRIPLPHVLAGEDGGVFGATLRRHYLCKTGWRVQVQCNASQFHAGSLLVFMAPEFYTGKGTKTGDMEPTDPFTMDTTWRAPQGAPTGYRYDS-RTGFFAMNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNIAPTSSWTQHANWTLVVAVFSPLQYASGSSSDVQITASIQPVNPVFNGLRHETVIAQ P17593/138-393 DQNTEEMENLSDRVLQDTAGNTVTNTQSTVGRLVGYGAVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGAALRRHYLVKTGWRVQVQCNASQFHAGSLLVFMAPEYPT-----------LDAFAMDNRW-SKDNLPNGTKTQTNRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHETLSRQ P12296/138-393 DQNTEEMENLSDRVSQDTAGNTVTNTQSTVGRLVGYGTVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGATLRRHYLVKTGWRVQVQCNASQFHAGSLLVFMAPEYPT-----------LDVFAMDNRW-SKDNLPNGTRTQTNRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHEVLSRQ P08545/148-414 DQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGKSHHGEHPTSCADAATDKVLAAERYYTIDLASWTTSQEAFSHIRIPLPHVLAGEDGGVFGATLRRHYLCKTGWRVQVQCNASQFHAGSLLVFMAPEFYTGKGTKSGTMEPSDPFTMDTTWRSPQSAPTGYRYDR-QAGFFAMNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNVAPSSSWTQHANWTLVVAVLSPLQYATGSSPDVQITASLQPVNPVFNGLRHETVLAQ Q66765/138-393 DQNTEEMENLSDRVSQDTAGNTVTNTQSTVGRLVGYGTVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGAALRRHYLVKTGWRVQVQCNASQFHAGGLLVFMAPEYPT-----------LDAFAMDNRW-SKDNLPNGTRTQTNKKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHETLSRQ Q1KNJ5/138-393 DQNTEEMENLSDRVSQDTAGNTVTNTQSTVGRLVGYGAVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGAALRRHYLVKTGWRVQVQCNASQFHAGSLLVFMAPEYPT-----------LDAFVMDNRW-SKDNLPNGTRTQTNKKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHETLSRQ J7K6T6/114-380 DQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGKSHHGEHPASCADAATDKVLAAERYYTIDLASWTTSQEAFSHIRIPLPHVLAGEDGGVFGATLRRHYLCKTGWRVQVQCNASQFHAGALLVLMAPEFYTGKGTKSGTMEPSDPFTMDTEWRTPQGAPTGYRFDS-QTGFFAMNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNVAPSSSWTQHANWTLVVAVLSPLQYAAGSSPDVQITASIQPVNPVFNGLRHETVIAQ P32540/138-393 DQNTEEMENLSDRVSQDTAGNTVTNTQSTVGRLVGYGTVHDGEHPASCADTASEKILAVERYYTFKVNDWTSTQKPFEYIRIPLPHVLSGEDGGVFGAALRRHYLVKTGWRVQVQCNASQFHAGSLLVFMAPEYPT-----------LDVFAMDNKW-SKDNLPNGTRTQANRKGPFAMDHQNFWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHEVLSRQ T1WMM5/138-393 DQNTEEMENLSDRVAQDTAGNTVTNTQSTVGRLLGYGVSHNGEHPASCADTASEKILAVERYYTFKVTDWTSTQKAFEYIRIPLPHVLSGESGGVFGAALRRHYLVKTGWRVQIQCNASQVHAGSLLVFMAPEYPT-----------LDAFVMDNRW-SKDNLPNGTKTQTNKKGPFGMDHQNYWQWTLYPHQFLNLRTNTTVDLEVPYVNIAPTSSWTQHASWTLVIAVVAPLTYSTGASTSLDITASIQPVRPVFNGLRHETLQTQ O56165/148-414 DQNTEEMENLSDRVASDKAGNSATNTQSTVGRLCGYGKSHHGEHPASCADTATDKVLAAERYYTIDLASWTTSQEAFSHIRIPLPHVLAGEDGGVFGATLRRHYLCKTGWRVQVQCNASQFHAGSLLVFMAPEFYTGKGTKTGTMEPSDPFTMDTEWRSPQGAPTGYRYDS-RTGFFATNHQNQWQWTVYPHQILNLRTNTTVDLEVPYVNVAPSSSWTQHANWTLVVAVLSPLQYATGSSPDVQITASLQPVNPVFNGLRHETVIAQ #=GC scorecons 9999999999999955959996699999999994999459599998999979679799699999556559966966957999999999699899999969999995999999989999998999799989999749222221212224959599649265555969474552659598669994999969999599999999999999999799699999996999979956995967969556599996999599999999966459 #=GC scorecons_70 **************__*_***__**********_***__*_***********_*****_*****__*__**_**__*_**********_****************_****************************_*____________*_*_**__*_*____*_*_*____*_*_*******_*********_****************************_*******__**_*_**_*__*_********_***********__* #=GC scorecons_80 **************__*_***__**********_***__*_***********__*_**_*****_____**__*__*__*********_*********_******_****************************_*____________*_*_**__*______*_*_*______*_**__***_****_****_********************_*******_****_**__**_*__*_*____****_***_*********____* #=GC scorecons_90 **************__*_***__**********_***__*_*********_*__*_**_*****_____**__*__*__*********_*********_******_******************_********__*____________*_*_**__*______*_*________*_**__***_****_****_*****************_**_*******_****_**__**_*__*_*____****_***_*********____* //